© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0378400.3
CTATGAAAGGCAGGACAGTGCTGCTTGATCGTAATCGTGCCGCCATCGGTATCGATTCAATATCGAGTGAGCCCTTTGGCTGGGATTCTTCTGCATGGTCGCTAAGGATCTCCCCGTGCCGGCCAATGTTGCCTCTGAAGATTGACGGGAACGGAAGGGGGACAGGGAGGGGGCAAAGAGATGCTGAGAGATGGGAAAATTTTGGCTTTGTCTCTCTGGCTTCGTAGACTGAACATACCGAGTCTTTCACTTGTGATATGGAAGTCCTTTGCCCACCTCTATCAAGAGCTCCATGAACCACCAGCGATTCAACTGAATAAGGATCTTCGTCCTCGTCGCTGATTTCAGGGGTCAAAGAGTGCAGCTTCATCTCTATGTTCCCCAATAGCATCTCTATCTGTCAAAGAAGGGGCAGGCATCGCTACATCCAGAGCAGTAACCATATTCTGCCGACCTTGATCAGATAAAATGTGCAGAAGTTCACCAATGTCAAGATTACCAGATGAATGTGCTAAGTCTGAACTCGGGCCCGTTCGTTGCAATCTAAATGGAACAGTAATTGAATGTATTGCTGCAGCACAAACAGCACTAGCATGGAATGGTTTCTCGTCTTGTATATAAAGATACGGTGACATGTAACTTCTACTTAATGAAGGCGGTCCTATGGGGACCATCAGGTTGCAAAAGGACGAAAGTTTTGAAAATGAAACAGCATCATGAAGAGCTCTCATAATGGACTCCCTTTGATTCATCCTGGATGATCCAAGGGTCATTGGATCCCTCACACAGTAAAGCAATACAGGTGTATTTGTGTAATCATCAGCAATGTTCTCCAAAAACTGTGCAGCTACACTGGAAAAACTTCCTGAATCACCCACAATAAACTGGATGCCCTGAATATGGTCGCATTCTTCAACAAAGAACCTTAGCCTCTCATTCATTTCCTCTATTTGCGACCAGTCTGAAACAACCTCTTGTGCGCTGCCATAGTTATCAAACTTGTCAAAGTCTGTCCATGACCCATGTAACTCATATAAACTCTGAGGATGATACTGAACTTTTGAATAATCCGTCCAAAAGTTGACGCCATTCTCTAGACAGTCGATCAGGTCCTTATCTTCAACACTTTTCTGGGAGTTGCTGGCACCATTGCTAGTGCTTGGATTCTGCCCTTCTTCAACTAAGCTTTGCAGAAACAAGTTCCGCCCATGAGGTTTTGAGACTGATCTTGTTACATTTCCAGACCATGTAGCAACATTGAGCTGATCTGCAGAAGCACTGGTCTGACAGAGATTACCGGATGAACTCAAAGAACCAAGGGACCCCTCGAGAACCAACCGATACCAGACGAGGGCAGTATGTGGGTACACCCTGGTGAAATCAAGCATTGTATGCTAGTAGCTATCAATTACAATTACAACAGATTTTGCGAATCTGCAATGAATTGCTGGTCCCAAAACACAGAGAACCTCGCTGCTCAGGTAAAGCTTCAGTCCATAAGGCTATACATCTCTGTCGGGAGTTCCAAAGATAATCTGTTACTCCCTCCATTCCAAAATATAAGGCATAACCATCCCACAGCATGCAACAGTTTATTGTGTAGATGGACACATGCAGATTTTCCTGATATGCAAGGAGATTCCTCAAGTGTGCTCTTGTTCCTTAGATCCTCTGACACCGGATAATGCCTGCAGCACCTCCATAGCACAACCATTTCTCGCTACCTTTATTCATGTTCCATCTCAACCGATGCAATGCTACAGCTTTAGGAGGAAAGACCTCAAAATTTTCAGGGGATTCGCTACCCCTGCTGGTGCTTGTGCCAAAATTCTCTTGCATTGAAGGAGCAGCTAAAACTATGGCACCAGTTTCTTGTCCTTCATCAGGTTCATCTTGTTGACCATCTCTGATGCTCGGATTTATAGCACAATTGTATTCTGAGTTGGCAAGAAGTTCCCCTTCTTCTATAACATGCAATTGAGCTACATCTTTGCAAGTTTTAGTAGCCCGTTTGGTCCCCAGAGGAACATTTGACAAAGGAGAGTTTGGTAATGCAATACCAATTTTAATGGTTGTTCCCTCCTCTGATAATGAACCACAAAGAAAATATGGTACACGGTTCCTCCCAGGTTCCTTTTCCCAGAATCTCGGAGTAAGCTCAAAGCAAACAGCAGTTCCATCAGCCACACAATAAGCCGCATAGCCTGCAATTTCTGAGGCATGGACACTCCAGATCAAATATTCAGACAATTGATAGGTAGAAACACCCTGAGTTTTCATTCCAACAAATGGCCTTCCAGTAACAGGAACATCATTTGCGATTCTCGACAAGCTAACGAACTTTAACGTGCCATCTTCCAATGATATGACAATACCTCTTGCATCCTTCAACCATTGAAGACTTATTACGGCCCTTCGAGCAGTAGTTAACTCCCAAAGATGGCGATATGGATCTCTTAAATCCCAGAATTTCAGACCATCCTCTCCAGCAGTGACAAAGGCATTCATGTTTTCCTTACTCACAGATGGTGTCCACGACACGGTTCTGATGGGAGCAGATTCAGCAGTTACACACATAAAAGGTTTTGAACCTTGAAATGACAAGTTTGCTGAGAACTTCCATAAAGCAACCGTTCCATCGTGACATCCCGCCAATATCATATCATGAGAGGGTGACCAATCAACTGTCAAGGGAATGCTTTGTCTGTTCCCACACTTTACTTTGGCAGAGCTAAACACAGGCTTCAGCTTTAAAAATCGAGGGTCAGTACCCTCCTTTGAAGAAGAGGAATATATTTTCTGAATCATGCTTGGTGATGGAACTTCCCATACTTCAAGCGAGCCATTCCCCAAGAGTACTGCAAGAAAACCCAAACATGATTTATGTTCTGACTGATTTGCTGAAGGAGGTTTCCATTTTATGTCCCAAGCAACTTTTCCATTATGAGCTAAACATAAGACAACCCTTGGTAGAGAAATGTCTTTTGGGACACGAGAAAGGGTCTTTTCTGCAGAACAAATCATATGATAATCTTTAGTTGATTCTTTAAATCGAGCCACTTCTGTATCTTTTAGTTCATCAATAACCTGAGCACTGTTTTCAGAAGGAACAGATACAGCCTGATTTCTCTCTGCGTTTTCAAAGTTACAAGCAGGAGTACAACATGAAGTATATGCAGTTGATGCAGAAGATCCGTCCATGTTCTGTACTTCAACACTAAGCACTACTGAACTTCTTTCATTTGAAACAGATTTCTTTTTATCTTGAACACTGCCCTTTCCGGGACATGATTCTTTCTTGCAATTTTCAACTAAGGCCGCATTGTCGCTTGACTTGGGAATTGTCTGTGTTTTTTGTTCTTCACCCCTGCATGCTTTAGAACAACCGCGTTCCGTTGAAATTGGCTGCTTTCTAGGTCTGCCTCTACCCTTCTTGGCACTTGATTCTTCCTTGCATTTTGCAAGACATATGCCCTGTGCTGGTGTTGCAACACGAGATGTTCCAACACTCAAATGGACACTGTTCTCTATAGCACAGCTTGATCGACCAATGTCATTTGCTAAAATGTCACAATTACTCTTGGCCAAGACCATGAGATTATTTGAATTGGTCAAAGTAGAACCTTTCTTTGGGGTCTCAGTACCAGGAGCAAATACACAACTGGTTGTACTCGGAAATGGTTTCTTCCTAGGTCGTCCCCTCCGCCTCGGACCAGTTGAGTTACTCTTGTTGCTTGATTCAGGTAAAATATACGTAGGCAACATGGATCCTACGTCAGACTGTCCAGATTGCATGGAATTATCAATATGAATTACTTCCTTTTCTGGCTGTTCTCTACCCCTCTGACCTGACAATGGAACTGGGGAGGCTGCATCAACTGCAGCATGAGTTATATTAGCACCAGACCCAGTATTTTCAGTGGGACCCAAACCACAATCAATTGAACCAGGCAACAGACAGACAGAATCATTTCCTAATTCAGTATCAGTGCCTGGAAGATGCTTGCTGTTGCTTGGAGCAGGATACTTTCGGGGCCTCCCCCTTTTTTTCTTGGGCTCCATGCAGGTTAAAGCTATTGGAGATAGAGCTGTAGACAAGTCTTCTGTTAGTTTAATGCCAGACAAACCTTTTATTTCAACAGGTTTTTTCCTAGGTCGCCCTCTACCTTTTCTTGGAGTTGATTCCACAGGATTAACAGTTGGCATGGGACAAGCTATTGCAACGTCACATGAAACAACTGCTGAACTGACAAGAGGATCAATAAGAGCAAACTCTTGACTTGTGTCGTTTTGGGATGAATCTTCCAATTTGGCAATTGGCAGCGGATATTTTCTTGGTCTGCCCCTTGGTCTTTTGACACTTGGTTCCAAGTGATCAGAATTTGTGATGGTCTTTCTTGGTCTACCCCTTCGTTTTGGTTGATTGGATGGATTATATTTATTGCATGCAACCAATGACTGATGAGGATGACCCTCTTCAGATGGTGCTAGGAGACACCAAACTTGAATTATACCTCTCCCGATTAATGGCATGCCAATTTTATGGTAAGAAGAACCAGGAGGGTGAGCAGCAACAGCAAGATACTCACAGTTTATGGGAGAATGAGGCCTGTCACACAACCTAGGGCACCAGTCCAATGCCCAAACATTGCCCCCGGCAAATATAACAAAATCTGAGAGAAAGAACTCCATAAACAATAACTGTCTGTTTTAGCCTTCCCATCGTCTAGGTGTGTGATCTGGGGAACAGATGCAGACGAGAACTGTGGTAAGTTTATCTTGTGTGTGTCAACTCTGGATGGAGCTGATCTGGCGTCACAAGTGAAACTAACATTTTTTGGCTCATAAGAGAGGTGCCTCCATTCTCTGAGGAAAGTTATTGAAGAGGCGAGCCGCTCTACTTCGGCGTCAGGGAAGTTCGGCTCGGGCTCCCCGGCTGTGAGCTCCGAGATGGCGTGCACCGCTCTGGAGAAGACCTCCGGTGACTCGTCAAATACGCAGACCTCGACGCCATCCTTAACCTCCTCTCCTTCAGTCTGGGGCAGCGCCCCCGTCGCCTCCGGCAGCGCCGCCATCACCGGCGAATCGAGCGAAGAGAGCGGTTGAGCCGTGGAAAACGAGAATGGGGGGAATCGGCCCTCGCAGGTGGGGTTGTTCAATCGAGCCGGCGGCCCGCCATCCCCGAATATTCTGCCGGTTTCCAATTGAGATCTCTACGGGCCTGTAGTTATGGGCTGAAAGCGTAACAATGCATTAGGCCCATATAGCTTCTGACTTTCTTGGGAATAGTTGTCGCGGACTCGGGGAGGAGGCGGGACGCGACGGGCGGCGGTCGAGGGCGGTGCGGGTCTAGGGTTTCGGCAGTGGTACGAGTAGAGGAAGGCGCGATGAGGGAGGAGTCGGCGGCGTCGGGTGACGGGGTGAGTGCGAGCGAGAGGAGGGCGGCGGTGTCCAACGGTCGACGGTGACGATGTGGGGGCCGGCGTGGCTATGTGGGGGAGTCCGGAGGATGGATTGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0378400.3 | 7 | 15734387 | T | C |
| Osa07LNT0378400.3 | 7 | 15736318 | T | C |
| Osa07LNT0378400.3 | 7 | 15735776 | A | G |
| Osa07LNT0378400.3 | 7 | 15737729 | T | A |
| Osa07LNT0378400.3 | 7 | 15733203 | C | T |
| Osa07LNT0378400.3 | 7 | 15733244 | T | C |
| Osa07LNT0378400.3 | 7 | 15733330 | T | A |
| Osa07LNT0378400.3 | 7 | 15733383 | G | T |
| Osa07LNT0378400.3 | 7 | 15733391 | A | G |
| Osa07LNT0378400.3 | 7 | 15733429 | T | C |
| Osa07LNT0378400.3 | 7 | 15733489 | T | A |
| Osa07LNT0378400.3 | 7 | 15734450 | G | A |
| Osa07LNT0378400.3 | 7 | 15734473 | G | A |
| Osa07LNT0378400.3 | 7 | 15734533 | A | G |
| Osa07LNT0378400.3 | 7 | 15734580 | A | C |
| Osa07LNT0378400.3 | 7 | 15734649 | T | A |
| Osa07LNT0378400.3 | 7 | 15734760 | A | T |
| Osa07LNT0378400.3 | 7 | 15735341 | T | A |
| Osa07LNT0378400.3 | 7 | 15735499 | C | G |
| Osa07LNT0378400.3 | 7 | 15736366 | A | G |
| Osa07LNT0378400.3 | 7 | 15736472 | A | G |
| Osa07LNT0378400.3 | 7 | 15736493 | A | G |
| Osa07LNT0378400.3 | 7 | 15737039 | A | G |
| Osa07LNT0378400.3 | 7 | 15737089 | T | G |
| Osa07LNT0378400.3 | 7 | 15737721 | G | A |
| Osa07LNT0378400.3 | 7 | 15737969 | T | C |
| Osa07LNT0378400.3 | 7 | 15738928 | T | A |
| Osa07LNT0378400.3 | 7 | 15739142 | C | T |
| Osa07LNT0378400.3 | 7 | 15739147 | A | G |
| Osa07LNT0378400.3 | 7 | 15739693 | C | T |
| Osa07LNT0378400.3 | 7 | 15739769 | G | A |
| Osa07LNT0378400.3 | 7 | 15739784 | T | C |
| Osa07LNT0378400.3 | 7 | 15740884 | T | C |
| Osa07LNT0378400.3 | 7 | 15741050 | A | G |
| Osa07LNT0378400.3 | 7 | 15741162 | A | G |
| Osa07LNT0378400.3 | 7 | 15741739 | G | A |
| Osa07LNT0378400.3 | 7 | 15742438 | A | C |
| Osa07LNT0378400.3 | 7 | 15742737 | A | G |
| Osa07LNT0378400.3 | 7 | 15743127 | T | C |
| Osa07LNT0378400.3 | 7 | 15743535 | A | C |
| Osa07LNT0378400.3 | 7 | 15743811 | A | T |
| Osa07LNT0378400.3 | 7 | 15743898 | A | T |
| Osa07LNT0378400.3 | 7 | 15743899 | T | A |
| Osa07LNT0378400.3 | 7 | 15744119 | G | A |
| Osa07LNT0378400.3 | 7 | 15744250 | A | G |
| Osa07LNT0378400.3 | 7 | 15744262 | A | C |
| Osa07LNT0378400.3 | 7 | 15744302 | A | T |
| Osa07LNT0378400.3 | 7 | 15744396 | C | T |
| Osa07LNT0378400.3 | 7 | 15744412 | G | T |
| Osa07LNT0378400.3 | 7 | 15744509 | A | T |
| Osa07LNT0378400.3 | 7 | 15745622 | A | C |
| Osa07LNT0378400.3 | 7 | 15743791 | T | C |
| Osa07LNT0378400.3 | 7 | 15745893 | T | C |
| Osa07LNT0378400.3 | 7 | 15746265 | A | G |
| Osa07LNT0378400.3 | 7 | 15743936 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0378400.3 | osa-miR5532 | Translation | 5.0 | 9.596 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR5798 | Translation | 5.0 | 15.291 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR5832 | Cleavage | 5.0 | 24.411 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR5832 | Cleavage | 5.0 | 14.13 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR6248 | Cleavage | 4.5 | 11.839 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR166b-5p | Translation | 5.0 | 21.456 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR166k-5p | Cleavage | 3.5 | 18.482 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR166k-5p | Translation | 4.5 | 13.245 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR166l-5p | Cleavage | 3.5 | 18.482 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR172a | Translation | 3.5 | 17.435 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR166h-5p | Cleavage | 5.0 | 21.456 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR172d-3p | Translation | 3.5 | 17.435 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR413 | Cleavage | 3.5 | 18.922 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR413 | Cleavage | 5.0 | 23.878 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR435 | Translation | 5.0 | 13.372 | 1 | 20 |
| Osa07LNT0378400.3 | osa-miR396e-3p | Cleavage | 4.5 | 15.984 | 1 | 24 |
| Osa07LNT0378400.3 | osa-miR818a | Cleavage | 4.0 | 15.142 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR818b | Cleavage | 4.0 | 15.142 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR818c | Cleavage | 4.0 | 15.142 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR818d | Cleavage | 4.0 | 15.142 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR818e | Cleavage | 4.0 | 15.142 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR1423-3p | Translation | 4.5 | 13.885 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1426 | Translation | 3.0 | 11.775 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1436 | Cleavage | 4.5 | 12.838 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1436 | Cleavage | 4.5 | 15.357 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1439 | Translation | 2.0 | 11.415 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1857-5p | Cleavage | 4.5 | 13.026 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR1880 | Cleavage | 5.0 | 17.96 | 1 | 24 |
| Osa07LNT0378400.3 | osa-miR2091-5p | Translation | 4.5 | 22.041 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR2091-5p | Translation | 4.5 | 18.721 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR2092-5p | Cleavage | 4.0 | 16.364 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR2099-3p | Cleavage | 5.0 | 16.482 | 1 | 20 |
| Osa07LNT0378400.3 | osa-miR2868 | Cleavage | 5.0 | 23.563 | 1 | 20 |
| Osa07LNT0378400.3 | osa-miR2918 | Cleavage | 4.5 | 17.617 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR2929 | Translation | 4.5 | 18.297 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR5159 | Cleavage | 4.5 | 20.577 | 1 | 24 |
| Osa07LNT0378400.3 | osa-miR5161 | Cleavage | 5.0 | 15.614 | 1 | 20 |
| Osa07LNT0378400.3 | osa-miR5500 | Cleavage | 4.5 | 15.109 | 1 | 22 |
| Osa07LNT0378400.3 | osa-miR5513 | Cleavage | 5.0 | 16.383 | 1 | 21 |
| Osa07LNT0378400.3 | osa-miR2092-3p | Translation | 4.0 | 13.875 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0378400.3 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0378400.3 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378400.3 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378400.3 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0378400.3 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378400.3 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0378400.3 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0378400.3 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0378400.3 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0378400.3 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)