© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0378500.1
CCTCGTTCAACAGATCCATTCTATGATTTCAAGTCTCAATAGAAATTAAGTGTTCCTTTCTCCTCATACCATACAATTATCCTCATTCCTAATTCTACAGATGCACAGGTCATTGTTCTATGATTTCAAGTCTCAACAGAAACTAATTGTTCCTTTGTTCTCTTAACATAACAGTTATTATGAGAGGAAGGCAGAGGTTACCGTTCAAGAACAACGATTTTTTTTGGGTGTATCCTGCAAAGCATGTTTCGGAAATGCTTTCTTGAAGAAATCATCATTTGCTATGAGATCCCCACCCTCGCACCAGATGACATACATGCAAGCTACGCAAAACAGATCAAGCAGTACATGATTGAATTGTAATGTGAAACGATCATAATAACATCAGTTGACCTTATGTTGACATGATGAAACCAAGCAAGGCAACTGAAGCCAAACATTCGGCAGATCTATCATCAGTCATAACGAAAGCACTGTGATTCGAGAGAGAATAAACTGTCCATGAGCACTGAATCTTTAGGAAAGAAGACGCTGGTTCTTAAGTCCTGCAGTTTTTAACTCAAAATGTTGCATAAATGTCGCAAGAAATTGAATGAAACCTAGCGAATGACTTGGAAATTAGGGCAAAAATCGAACCTAGCATGAAGGCAACTAAACATAACCATATCCAAAATGTTCGTGTAATTTTCATAAAGGGGAATATGGCAAGATAGGTAACATGCAACACATGACATAGCACACTAATGATCAGTTACCTTTAATAGGGCTGAACCTGAACGTGTCTGCATATCCAGATTTGCAGTCCAATACTAGCGTTGTTGTACGCTTTCAGCTTTATTAGACTAATTTTCAGTTTCAAATGTTGAAACAAAACCTCACTGTATGTTAATATAGGTAACTCAAAATACTAGGAAAGGTAAACAATACCTACCTGATATTTTTTCCCCTCTAAAAGGAAGACTGTAGGGTCCCAACAGAGCTCATGAGTTTTAACTCGGAATAAAACTATCTATATGTTCACTGATCTGGGCCATGCCTGCTTGGAGAACGAGACCTGCTCCTCACTCTACTCCTGTCCTTTCTCATGTCATCACTCCTATATCGGTGTCTGTCTCTTTCAGAATCCCTACCATTTCTGTAGGAACTGCTTCTATATTCTGATCCTCTATCTCTGTGATCATGAGACCTTTCTCTTCCACGATTGCGGTCATAGTAACGATCACGGTCATAGTCACGATCCCCAGACTTCTCTCTTCTAGAACCACCGTCCCTGCCTCCAACATCATACTCTTTTTCCCTCTGTTTCCTACGTTCTTCTGCTTTCTTCTCCCTTGCAATCCTCTCTTCGTCTCTTGCCTTCTCTTTTGCAGCCTTGTGTTCAGCTAGAAAATCTCTGACCAAACCATAGCCAATATGTTGTTTCCCAGTCACATGGGATTGTGTCCTCTCAAGAACATCATCTGCAACTAAGAATGATCCACATATTTCACAAAGTTCCATCTTCTTCTCTTGTGGAAGCATAGCCACTTTATTATCTGCTTGATTCGTTAAAGCTGTCTTCTCAGCATTTAGAAGTTCAACCTTCCTCATAAGTGCCTCAGCTTCATCTACTTTACCAGCTTCACCAAGCTCCTCAATTTGCTCCAACAGCTTCTTGACCTTTTCTTCTATAATTGAAAGCTGCTCAGATGTTTTCCCTATGACGGGAGGTGGCACAGCAACATCTTGAGCCAACCTTTCTCGACCACGCCTTATTTTTCTATCCAAATCTATAACCAGTTTCTCACATTGTTGAGCAAGTTCCGCCTCAAACCTTCGCATGTGAGTTTCACGCCTGGGAGAACTCTCAAAGCTGCACTTGCCCAGAGAAAAAAAAATTAAATGCATAAATTGCTCTCCCTATATCAGATAGGTACACGACAGAACAACTGAGCTGGACTGATTATTCAAAATAGGTTATGGGAATGCGCAAGACCCATTTGGCAGGTTAGGCAAGGCAGATTAGGAATAAACAGATAAGTTCCGATAGTAAATTAGAGGTAGAGATGTGGACTGGTTTCCTATAATGTTACAGATTAGTTCCTTGGATGTCAAGTCAGTCCTCCCTATATATAAAGGGACAGACCAGCAGTCAAAAAGATGTTCTTGGTTCAACATATTCTATTAAAAGAAGTCATAAATTGGGCGTAATACAGCATACATTTAATGTTATTGACCAAAATAACTTTGATAACCCTCATCCCAATATTCATAACGACGCAAGCAGGCTGGGTGCATCTAGTACATGTTGCAAACCAATGATGTCATTCCAAAATAATTTGTTTATGTCTGATTGAGAAAAGGTATATCCCTTTCACCCTCGCCATGTGATGCTTATGTGACTGCATAGGAAACAATATTCCCTGCACTGACCTACACGAACAATATTCCCCATAAACAAATTATGCTCATTCTGGACAATTATTGTGTGTATCCTGCAGATATATCTTAATAAAGGATCTTCAAAAACGTATAAGATAAAACTAGGTTGGTCCGGAACTAGCGGCAACAATTAAGCGATCCTGATTTCCACAGTCACAGATAGCACTTCTAAACGTCCTGATTTCCACTTAATTCGAACTATGCGGTCACATTAACGAATAAAAGCCCATGCACAAACTTAAAACAAGAACATGTCCATATAACGTAACTTGTTAAAGAACTCTTTTGTACAGTAGTACGAAAGTCAAAGTTATATGCAGGAAAAAGTAGAATATCCATTCCTATGCATCAAAGTTGTTGAGAAGCGGCATGCACAGACTCCCTCTGCCCAAAAGAAATTAGTGTTCCACCTATGAATTAGTTAACAAAATTAGCTGCTGTAAGATGTATAGGTATATTCCTACATTGCTCTTCTCAATATGCATTTAACCTTGCATTTCTATCAGCTGAACAAGTTTCTCCCAAAATTACAAGATTTTTTTTCTGCCATGTTGTTTTTATTGAGAACACATCTTTTAAGATGTAAAGCTTCTTATGTGTAATACATCTGGAACTGGATGCTTCTTCAGACACTACGTAGAGTGCCGTGGCATCAGTATTCACATACAAGACATGGTGTGATGCAAGTAATCCAGCATCTTAGTTCTCAATAGCAAGGTGCATGAAGAAATCACAACAGGAAACATGCAGGGAAACTGAAAGTACAACATACCAGCTCAACGGAAACGCGGAAGGCCGAAATCCTCATTCCTCAATACTAAACAAAACCTAGTCGCGCAATGATATAAATAACATCTTATAGCGCAAAAGCATCAATTATCTATACCATTTAGGTGTAAGCATACATTATGGTACCATTTTTTTTCTCATAACAATAATCACCTTTCCCCCATACTAATGGGCGCAGGTTTAGCACCAAAACCTAGATAATTCTGAGGGGGGCGAGAATCGGGCCTTACCTCTCCTTAAGCTTCAGATCATGGATCTTCATGCACGGCCCGAGGTTGCTCTTGGTGTTGACGAAGAGGTCGTGGGGGCAGAAGCGGGCCATGAAGGCGGCGCACACGTCCGGGTCGTCCCACCTCACCTCCTTGTGCGCCTTCCTCTCCTCCTCCGTCAGGTCGCGGGCTGTGCCCATGAGCTCGTCGAGGAGAGCTCGCTGCGCATCCATGGCGTTGGAGGGAGGCGGCGCGGCGCGGCAGGGGGGAGAAACCTTAGCCGGCTGCTATGTTTCCCTTCGGTTTTGGGATTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0378500.1 | 7 | 15870592 | C | A |
| Osa07LNT0378500.1 | 7 | 15872663 | T | C |
| Osa07LNT0378500.1 | 7 | 15869030 | C | T |
| Osa07LNT0378500.1 | 7 | 15869472 | A | G |
| Osa07LNT0378500.1 | 7 | 15870288 | G | A |
| Osa07LNT0378500.1 | 7 | 15870337 | G | A |
| Osa07LNT0378500.1 | 7 | 15871225 | A | G |
| Osa07LNT0378500.1 | 7 | 15872551 | T | C |
| Osa07LNT0378500.1 | 7 | 15872654 | T | C |
| Osa07LNT0378500.1 | 7 | 15873885 | T | C |
| Osa07LNT0378500.1 | 7 | 15871831 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0378500.1 | osa-miR5791 | Translation | 5.0 | 5.533 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR5815 | Cleavage | 5.0 | 14.358 | 1 | 24 |
| Osa07LNT0378500.1 | osa-miR166c-5p | Cleavage | 4.5 | 13.076 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR396a-3p | Cleavage | 5.0 | 19.884 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR396b-3p | Cleavage | 5.0 | 19.884 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR396c-3p | Cleavage | 3.0 | 8.007 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR399h | Translation | 4.0 | 16.599 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR168b | Translation | 5.0 | 10.472 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR172c | Cleavage | 5.0 | 16.828 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR1854-5p | Translation | 4.5 | 8.201 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR2095-3p | Cleavage | 5.0 | 19.806 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR2095-3p | Cleavage | 5.0 | 15.745 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR2099-3p | Cleavage | 5.0 | 15.475 | 1 | 20 |
| Osa07LNT0378500.1 | osa-miR2879 | Cleavage | 4.5 | 16.745 | 1 | 24 |
| Osa07LNT0378500.1 | osa-miR2873b | Translation | 5.0 | 18.27 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR5148a | Cleavage | 4.0 | 13.192 | 1 | 24 |
| Osa07LNT0378500.1 | osa-miR5148b | Cleavage | 4.0 | 13.192 | 1 | 24 |
| Osa07LNT0378500.1 | osa-miR5148c | Cleavage | 4.0 | 13.192 | 1 | 24 |
| Osa07LNT0378500.1 | osa-miR5488 | Translation | 5.0 | 15.003 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR5488 | Cleavage | 4.5 | 22.323 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR5504 | Cleavage | 5.0 | 4.791 | 1 | 21 |
| Osa07LNT0378500.1 | osa-miR1854-5p | Translation | 4.5 | 11.099 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0378500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0378500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0378500.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0378500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0378500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0378500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0378500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)