© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0378600.2
CAGGAAACATATTTTTTAAAGTTTGTAGCAAATAATGTGACAATAATAATCCGATGAAGTAGCTAAAAAGAAAATAAAAAGAGCCAAAATTCTGGTTTCTATGCTACGTGCCCTCGGTTATCTTTCTCAAACTCAAAGTAGGCAGACCAAGGTGACAGAAAAACAAGACAGGGCTTGGGTATCAGAGTATGCCACAGTGGACACCATAAGGCATGCTGCAAGGGAGACACCAGTATGAGTCATCAGATGGCCATAGGTTGTTTGAATTTGATGTCGCTTAGCTTGACTTCGAAACCAGGGTAGTAAAATAAATGTTCCCAGCATATCAGATGGCTTCTTCCTCATATGACCACATATGCTGCTAAAATTACATATTAAGATTACAACAGGTACTCTTCCACCATGGTTTCCTGGCACAGGAGTATAACTTTTAAGTTGCATGTGTTAAGAACCGTCTCCCGTGATGATGCTTGTCGTCATTTCTTCAATGGGAACTCAGGAATATTCTGACGAGGTGATCTTGATTCACGACGAGATCTTAATAACTCTAGGCAGGGCCAATAAGGTTTTTTATTTCTGCAAGGCAGTCATCGAGAGCTTTATACTCAGGGGTATGTAAGAAGTCTGAAGCCTGTTTTAAGGAGCTTTTAAGGTGCATCTCAGCTGAAAATAACTCTCTTTGGCTTCCAGTCGAAGAAGAAATTTCCATATAGATCTTGCAAAGCTGCAGGGAAGCTTGAGCATACTTAGTGAACTTCGTCTGGTCATGCCATAGTCCAGAACCCTGGAGAGACCGAACTTGCTTCAACATAGCTTCAGAGCATGCGATAAGGTTACCCTTCGTCTTATGCCACCTCGCATATAAACCCCATATCTCCGAATTGCTACCCCCACTTCGTACAATCTGCTGAAGGATATCACCAATTATATCTAACAACTGGTTGTACTTCCTGGTCTCTTGATTTGCATCATCTGAGGTGCTTCTGGAAGATTCAGCTTCTTGAGTATCAGAGAGATGTGTAGGTTGTTCTTCAAGCATGGCCATCACCTTTTCCAACAAATCAATGTTGAAACGTTTGTTCGAGGATAGGTTTAGTACCATTTTGACAGCCTCTAGTGTCTGTTGAATACTTCCTGTGTCCAAAAGAACCTTACTGTAATTATCCCAAACCTCCCAACTATTCCTCTTGAACTTTACAGCTTCTTTGAATGCTTGGACTGCTGCTTGGCTCCTTCCTCTAATCATGTGCAGGCAGGCTATGTTGTTCCATGCTTCTCCATTTTCAGGATCTATCTGCACAGAACGAGTAAAAGCGTCCACAGCTTTCTCAAGATCTTTATCCTTCCATGCCACTGTACCGTATGCAAACCAGCCATCTGGAAACAAAGAATTCAACGCCAATGCAGATTCCCAGAGCATTTTGGATGCATGGAAATCATTCCTGTTGTAAGCACTGCGAGCCAGTGAACGCAGAGCTCGAGCAGATTTGTTATTTGAGACTTCCAATGCTTTTTTGTAATGATCATCATTGTTAGTAACATCGCCAAGTGAACACCATAATCTCGGGTCATTGGGTGTAACAGAGATTCGAGCATTTATTAGACTAGTGGCATCAGCAACTTTACCTAATAATCGATAGCAGTAGATTAAATTATCCCACAATTCAAGGTCTTTAAAAATATCCAGTGCTTCTCCAACTATACCACAGCTTATCAAAAGCTCACCATATTCTTTTCTTAATGCAGGGATAGTTGGCATCTGAACTCCAAAAACCAGTTTGGCTCTCTGTGCAGCCACAGGGAAATCATTGCCAACATCTTCAACCATATTTTCCATCATCAATAGCGCCCTCTGCTTAGTCCGATTGCGGGTGGACTCCCATCTAATACGCAGAATATCACACAAGCTCCTGACCACAAAGTAGGAATCCTCCTGAGAATCAATTGACTCTATGAACGGTGCCATCTCCCACCCAGACATTTCATCATGCCGACTCCTTCGGCTCACATGCAAACATTCTGCTAGGACAGCAGCTTGTTGCATAGCCGTCAGTACTGCCTTTTTGCTTGGATCTTTCTTCTCGTCATTACCCGAATCATTATCATTTTCAACCAGCCTTGGCATTCTTAGTATATCACAAAATTCATCACTTTCACCAGGAACGGAACTCCTTGCATTTTTTAAAGCAGCAGCATCATCCTGAGTTCCTGTGAGTTCTGTTACTTGTCCCTCACCAGATGCTGGTCCACTTGTGTTTGCAACAAGTACCATTTGGGACTTTGCATCCACCTGATGTATTGTTCGAAAACCAAGCATCCCTGTGAGAGAGAGATGCAGCCCACATGCTTCTTGAGCACTATCCAGATGCAGCCTTGATTGATCAATTCTGCCATATTTATATTCCGCAATTCCAGCTTCTAAGAAAGCAGCTGAGACAAAATATGAGCCTTCTCCATCACACAACAAAGGACCCCAGTAGCTAAAAACATTTTCAAGTTCACCAAAGTGGGCCAATGTCTTATTCTTGTACTCTTGTACTTGATCAAACAAAGTGGATGATAACTCGTCTACAATGTTCTGTCGGACCATAGATAATCTACACAACCACCATGACACACTACAACAATCTGTGGGGTCCAGACTCTTTATAGAAGTTAACATAAGTTCTGCAAAGACAATGAACTGCATAAGTGAGAATTTCCCATGAACATGGGAACCAATAGAAGCTAACTGAGCAGAAGCCCATGCATCCCATTCATCTTCAAGATTACTATAACATCCTTCATCCAATGATGAAGTCCAGAAAGGGAAAGGGGAATACTTCCCTGGAGGCCCCGTCACGTTCTGCTGCGTGAACGCGAGAATCGCGGCCACCGCCGCCGACAGAACGACGGCGCACCTGCACTCGAACCCCTCGCCAGCCGCCGCCGCCCCGCCGTCGTCCCCGCGCAGGAACCCCTCGGCGGCGGCGGCGAGGTCGCCGTAGAACCGCGCCGCGGACCCCGGCGCGGCGGGGGCGGTGGGAGGGAGGAGGTGCGGGGCGGCGGAGGCGAGGGCGGCCGCGTAGTCGCCGGCGTCGACGGCGGCGACGGCGGAGGCGGCGACCGGGGCGAGCGGGTGGCGAGGGGGAGGCGAGGGCGGGGGAGGCAGGGTGGCCGGGGAGGGGAGCGTGCAGCGGAGGAGGCGGAGCTCGACCTCGCGGAGGAAGGTGGGGCCGGGAGGGGCCGGGGATGCCGCCATGGCGGTGCACGGCTGCGACGGCGAGGTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0378600.2 | 7 | 15782257 | A | G |
| Osa07LNT0378600.2 | 7 | 15768553 | C | T |
| Osa07LNT0378600.2 | 7 | 15768583 | T | G |
| Osa07LNT0378600.2 | 7 | 15769045 | A | G |
| Osa07LNT0378600.2 | 7 | 15769137 | A | G |
| Osa07LNT0378600.2 | 7 | 15769567 | T | G |
| Osa07LNT0378600.2 | 7 | 15769741 | C | A |
| Osa07LNT0378600.2 | 7 | 15770685 | T | G |
| Osa07LNT0378600.2 | 7 | 15770703 | A | G |
| Osa07LNT0378600.2 | 7 | 15771009 | A | G |
| Osa07LNT0378600.2 | 7 | 15771558 | G | A |
| Osa07LNT0378600.2 | 7 | 15771903 | A | G |
| Osa07LNT0378600.2 | 7 | 15772595 | A | G |
| Osa07LNT0378600.2 | 7 | 15773303 | A | G |
| Osa07LNT0378600.2 | 7 | 15773956 | A | C |
| Osa07LNT0378600.2 | 7 | 15773990 | A | C |
| Osa07LNT0378600.2 | 7 | 15774179 | T | A |
| Osa07LNT0378600.2 | 7 | 15775019 | C | G |
| Osa07LNT0378600.2 | 7 | 15775066 | C | T |
| Osa07LNT0378600.2 | 7 | 15775740 | C | A |
| Osa07LNT0378600.2 | 7 | 15776104 | C | A |
| Osa07LNT0378600.2 | 7 | 15776879 | A | T |
| Osa07LNT0378600.2 | 7 | 15777011 | C | T |
| Osa07LNT0378600.2 | 7 | 15777201 | T | C |
| Osa07LNT0378600.2 | 7 | 15777413 | G | C |
| Osa07LNT0378600.2 | 7 | 15777454 | A | C |
| Osa07LNT0378600.2 | 7 | 15778441 | A | G |
| Osa07LNT0378600.2 | 7 | 15778678 | T | C |
| Osa07LNT0378600.2 | 7 | 15779363 | C | T |
| Osa07LNT0378600.2 | 7 | 15779740 | A | G |
| Osa07LNT0378600.2 | 7 | 15770186 | T | A |
| Osa07LNT0378600.2 | 7 | 15780332 | A | G |
| Osa07LNT0378600.2 | 7 | 15780389 | A | C |
| Osa07LNT0378600.2 | 7 | 15780575 | A | G |
| Osa07LNT0378600.2 | 7 | 15780633 | A | G |
| Osa07LNT0378600.2 | 7 | 15780785 | T | A |
| Osa07LNT0378600.2 | 7 | 15781316 | C | T |
| Osa07LNT0378600.2 | 7 | 15781387 | A | C |
| Osa07LNT0378600.2 | 7 | 15781485 | A | G |
| Osa07LNT0378600.2 | 7 | 15781604 | A | G |
| Osa07LNT0378600.2 | 7 | 15781916 | T | C |
| Osa07LNT0378600.2 | 7 | 15782605 | C | T |
| Osa07LNT0378600.2 | 7 | 15783055 | T | C |
| Osa07LNT0378600.2 | 7 | 15783070 | C | T |
| Osa07LNT0378600.2 | 7 | 15783077 | A | C |
| Osa07LNT0378600.2 | 7 | 15783766 | G | A |
| Osa07LNT0378600.2 | 7 | 15783790 | G | A |
| Osa07LNT0378600.2 | 7 | 15784127 | C | T |
| Osa07LNT0378600.2 | 7 | 15784675 | A | C |
| Osa07LNT0378600.2 | 7 | 15784700 | A | G |
| Osa07LNT0378600.2 | 7 | 15784912 | A | T |
| Osa07LNT0378600.2 | 7 | 15785485 | T | C |
| Osa07LNT0378600.2 | 7 | 15780245 | A | G |
| Osa07LNT0378600.2 | 7 | 15785582 | T | C |
| Osa07LNT0378600.2 | 7 | 15769503 | C | T |
| Osa07LNT0378600.2 | 7 | 15769969 | C | A |
| Osa07LNT0378600.2 | 7 | 15777163 | A | C |
| Osa07LNT0378600.2 | 7 | 15781642 | G | A |
| Osa07LNT0378600.2 | 7 | 15768727 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0378600.2 | osa-miR408-3p | Translation | 5.0 | 16.388 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR390-5p | Cleavage | 4.5 | 6.089 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR812a | Translation | 4.0 | 14.642 | 1 | 22 |
| Osa07LNT0378600.2 | osa-miR812b | Translation | 4.0 | 14.642 | 1 | 22 |
| Osa07LNT0378600.2 | osa-miR812c | Translation | 4.0 | 14.642 | 1 | 22 |
| Osa07LNT0378600.2 | osa-miR812d | Translation | 4.0 | 14.642 | 1 | 22 |
| Osa07LNT0378600.2 | osa-miR812e | Translation | 4.0 | 14.642 | 1 | 22 |
| Osa07LNT0378600.2 | osa-miR1850.1 | Cleavage | 5.0 | 7.59 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR1865-5p | Cleavage | 4.0 | 15.614 | 1 | 24 |
| Osa07LNT0378600.2 | osa-miR1862d | Cleavage | 4.5 | 11.328 | 1 | 24 |
| Osa07LNT0378600.2 | osa-miR2864.1 | Cleavage | 2.5 | 14.347 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR2924 | Cleavage | 2.5 | 22.553 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR2924 | Cleavage | 5.0 | 15.833 | 1 | 21 |
| Osa07LNT0378600.2 | osa-miR5073 | Cleavage | 4.5 | 9.538 | 1 | 23 |
| Osa07LNT0378600.2 | osa-miR5150-3p | Translation | 3.5 | 19.924 | 1 | 24 |
| Osa07LNT0378600.2 | osa-miR5484 | Cleavage | 4.5 | 10.916 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0378600.2 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0378600.2 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0378600.2 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0378600.2 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0378600.2 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0378600.2 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378600.2 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0378600.2 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378600.2 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0378600.2 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)