© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0379000.1
TCTACACATCGCGCAGCCCCACCCCTCTCCTCGCGCCGCCCCCGATCTTTGCCGGGCGCCCGCCTCCGCGCCGCTACATCACCATCGCCCGGAGTTGCCAGGGTCGTCGTCCTCCGATCTCCTTCGCCCGAGCCGATCTCTCCACCGATTTGCTCCGCTCGTGCCGATCTCTCCCGTCCGCGTCGGCAGTGACGGCCGCCTCGCCGATCTCCTCCGTGCCACCGTCGGTACTCCCTCACCAATCTGCTCCGCCCGCGCCGATCTCTCCCATCCGCGTCGCCAGCGAGGGCCACCCCACCAATCTCCTCCGTGCCACCTCTGGAACACCCGCGCCCGCGTCGCCGACGACCTAGAATTAAGTAGTAGTTGCTAGCTCTGGTTGGCAGCACATACACATTTCATCGAGCACGTCTTGAGCGTTCTAGAATTCTTGAGTGCTCTATATTGTGGTTAGATCAACAAGATGAGAGGCCTCCTGTGATTTACCTGTAGGATCATGTGAGAATACACCAATCTGCAGGAAAAAAAAGTTTAGATTGTCGAAGCAAAGCTGACCGGACACCATGCCAATTGCTATTGTTTACTGCACAATCAAGGAGATTTTTGGCTGATTCTACTAAATTTCTGTTTGGTAAAGCTTATTAATTTGCATAGGATTACAAATGATTCCGAGCGCCACAGTCAGTCCTACAAGATCAGCGTCGGCAGTCCTCTCTGCCCTGATTAAGGAGTGCATGAACAAGGTTTCCTAAACGGTGTTTTTCCTCGCTCATCCTGAAAGCCCTGATCCTGAAGGTTCATTCCTTCTATTACTGACATCATAACTGAAGCTTGCAACAGTTTATGTGTCATATTAATGCCATTGGTATTCAATCCATTTCCTGATAATATAGAATTGCTCTTATTTTCCTTGTAAAATTATGTGCAAGCAGTAAGATTTTAAATTGGTTATTGTCTTCATGATCATTGGATCTTTTTTTTTCCAATGAAGTGTATCAAACTAGAGCAAACTGTTACTCTGAACATGTCAAATTGGTCATTTATCTGAATTTATAAAATAGCGTTAACTTCCTTTTTCGTTCACAAATTTCTTGCTTTGCAATCAATATAAATTCAGACAAATTTACAAGCTGTTAATATATCAATGACCACTACATATCCTATAGCAACTAATTAAAGCTTCTAATAATGGAGATATTTACTAAAAATAAGATGGTGTTACTTATTTCAGATTCAGCACATGATTTATATTTTAGATTTTGTATATAACTCAGTTTAAAGTTCAGAATGTAAATAGGCACAATATTTAGTTGAATCATTTGGAAATAAAACATGCTTATGCTGAACTGCTGGTATCCCTATAGACTGAACAGCTAGAAAAACATGCGTACACTGAACTGCTGATAAGACAGTTTAAGTTCAAACATTTATTAAGTATACTGAATCATTGGGAATTCCTGTAGATTGCTTCCCCATTTGAATTTTACTGACATTACCCATGACTGTATCAATGTTAAATTTTGGTTGCATCAATAAATCTTCTACTTGTTACCAGCATCCTTATCGCACCTACTTAATTTGTTTGATATAACAAAATGAACAAGGATGTGAACTACAGTTGGTACACTGAATTGCTAAGAGAAATGCTTGTAACAACATGTATATTGTTGATAATATTAAGGTGCTTTCAGTGAATTTCACATTTGCTATTTACAGCTCAGGTACTTTCAGTGAACAGGAAGCTTACTCATAAGGAATCAAACCAATCGTGAAGATAGCGGGTACTCTGAGAATTGACAGAGATGAGAGTCTGGCTAAATAGTCAGCCATGTGAAATGCCTTAATGAACTCTCTATTTCGATAGATGAGATATGTGAAATGCCTTAATGAACTCTGTATTTCGATAGATGAGATAGCTCATTTAGGCAGTACATACATGACGTGGGTTCTTCGATCCATTCAACTCTGTAGTGCTGATCCATTTATAGATATTTCTCCCTTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0379000.1 | 7 | 16427342 | G | C |
| Osa07LNT0379000.1 | 7 | 16429702 | A | G |
| Osa07LNT0379000.1 | 7 | 16427168 | G | C |
| Osa07LNT0379000.1 | 7 | 16427310 | T | C |
| Osa07LNT0379000.1 | 7 | 16427648 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0379000.1 | osa-miR168a-5p | Translation | 4.0 | 21.546 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR169f.2 | Translation | 4.0 | 19.091 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR535-5p | Translation | 4.5 | 19.274 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR1854-3p | Cleavage | 5.0 | 10.183 | 1 | 22 |
| Osa07LNT0379000.1 | osa-miR1866-5p | Cleavage | 5.0 | 12.039 | 1 | 24 |
| Osa07LNT0379000.1 | osa-miR2099-5p | Translation | 4.5 | 11.147 | 1 | 22 |
| Osa07LNT0379000.1 | osa-miR2873a | Cleavage | 4.5 | 13.72 | 1 | 24 |
| Osa07LNT0379000.1 | osa-miR395x | Cleavage | 4.5 | 9.92 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR5338 | Translation | 3.5 | 8.633 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR5487 | Cleavage | 5.0 | 11.759 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR5508 | Cleavage | 4.5 | 14.272 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR5509 | Cleavage | 4.5 | 14.966 | 1 | 21 |
| Osa07LNT0379000.1 | osa-miR444a-5p | Cleavage | 4.0 | 18.96 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0379000.1 | 7 | nan | Resistance or Tolerance | Other disease resistance | C1226 | R1440 |
| Osa07LNT0379000.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0379000.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0379000.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0379000.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0379000.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0379000.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0379000.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0379000.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)