© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0379400.1
ATCCAGGGTACATTAGTATCTGTATCAAAAAAAAAAGAAAATATATTTGTATCTGTATCCACACAAAAAAATGTGAGAGCAAATAATTATTCTTTACATCTCTTCTCTAAGAAGATAGCTCCAAATAGAACATTTCCTAGTACTACATATCTGCTTGTTTGTTTGTCCAGATTTATAGTACTCTGAAATATCCTATTTGGTCCTAGGTTTTTATATTTTAGGACGGATGTAGTATCTTGAATAAAACAAAACAAAATCACTACCTTCTGGAGAGAGATACCTCATCTCATGAATTACTGGCAGCATTTATGTTCCTCGTTACGCCCTTTGTATGCTCCAGGTCCAGGATGTTGATCCTTGTTCAAATTCATGTATTCCAGTTTCCAGATGGGAACTGAAATTTTATTATGCAGCTCTTCTTGTGAAAGCTATAAGCACCGCAAAAATTATAGCTATGATTTACAATTAATCATGTGTAACAACGTTTGTAAACCACCAACTATATATCTTCACTGAATCAGTAAACTTGTCAACTATTCTATAATATCAACACCGGCTGCTGATTGTAATATCACTTCTGCCAGACTTTCTGATCTGGAGTGAAGTCTTACTTGTCAGTCTCTTACGACTCGCATCCATAGCGTAGAAAAGAAGCACGCAAGCCAACAGAACAATCTTCATTCTTTCTTGTAAAGGTATAATTAACTGACAAGACTATCTGACGATCCAGTATTATTGCAGCTTATGCCAAGTTGGATAAAGAAGCATCACTTGGCCTTAGTGAGAAGCAGACCATGGAAACATGACTTGCCAACATAAGTGAAAGATTTGATGTTCAAGATAAAACCATACTACGTACCAAATGATTTTATAGTAGATTTCACCAGCAAGCTGACAGTATGATGGTCCATTATATTCCAACCACGGCTGACCAGACAAAGGTAATAGCATGTCTAATGGCACCAAACCATCATATCACAGTGCTGAAGGTTTCCTAGCTCGGGTCAATGACGGTACATATATTCTGTAACGTTGTCAAGGATAAGGAGTGATAGCCTGCGAGCTCAGTCGAGCAATATCTGAAATTCAATTTCCTCATTTTGGATAAGACGTATCTAGTCTCTGTTGTTCGCTGAGGGGATCAAGATACCTCAAGTAGTTGAGCATTGCACTCCAGAATGTCTGCGCCACCAAAGTCGTGCTCTCCAGGATGTTTTGTCGCCTTTCGATAAGATGAACTAGTGCTATCATATATGTTCTGTCAGAAAGGCACAAATAATGAACAAAGGAGTACTCCAGTGTCAAGGGCAGAGATACTGTCGCTGCTGATATTTTACTAAGACCTTATCCAACTCCAGAAAGGCAGAGACCAACTGACAACAACTTCTGGCAGAAAATCACCTTGGATCACTTGCAGTTTCCATGAGGCAGCTGTCAACACTTTGCATTTCGCATGGAGCCATGGGCATTCTGAATTCCTTTGCAGCACAGATAACAAGTTATCAGAAATGTTCATCGGATGATAGGAGGGCAGTGGAATACTGGAACGAATTTCTGTCAGCATTGTTGACAAGGATGAAGGATAAGTTAACAGTCCCATTCCATCAATATACAGTATTTTGTATCCATCTTGCATTATATATCTTCAATTGATTGTCTCCAATCAGTATCATCCAGTTTCAGAGCCCAAAACAAAGACAACTTCACCTTGTGAGCATATCAGGTGATTGAGTGAACTGTATCAGCATCTCATTTCTTAACTGACTGATAAGCAAGAATATTGCTTTCATTTTCCCTGCAGGAAACCACAGTTTTATGTAGGGTAATATCATTGTTTTGGTGTCTGAGAAAGCCATTTGCACTTCTAAGACCTCCCGGCATTCCATATTCCCCATAGCAAGTTGTCAAATGGATGTAAGTAGCTGTGTCCGGTTTCAGCCCCAACTCATGCATCTGCATGAATAAACTGAAAGCTTTATCCACCTCCCCACAGGACGCATAAACTTTGAAGGCAACATTGCATGCACACTGATCTATTGTCAACACAGGCTTCATATATTTCTCGCAAATATTTAATGCTGCAGCATGCATGCCAGCTATCAAAAACAAGAAAGCGATTACAGCTTGACTAGAAGAGCTCCTGTTGTCATTATATGCTGATTGTAACTGTGAAACTTCCTCAGGTGCAATCTGGATTTTCTTCATTATAGAAAATATCATTCCAAACGTTGAGGCATCTGGCAAAATGTTGCCTTCCTGCATTTGTTGCACCAATTCTGCACATTCTCTTAGCTTGCCCTTGGCCACAAAACATGCCATAACAGCATTGTATGAAGCACAGTCGGATAGTAAGCCTGAATTCTGCAAGTCATGAGCAACCCTAACTGACTCATTAAGCAAGCCCATGTTCTTGTACAGGGATATCATGCTAGTATATGAAACATCATCGGCCTGATTATTTCTCCTCAAACAGTCAAATATTTCCTTAACCTTAGTGACCATCCCAAGATTTGCATAAAGGTTTAGCATGGAATTAGAGGCAACAATATCAGGGCCACCATCCATGCTCTTCATCCTTGAATACAAATCTTGCGCTTCCTTCCAGCAATTGGCTTTACTGTAGGCCTTGATAAGAGAAGTTAAAACAATTTGGTTAGGAGCAATTCCAGATTCTTCCATCAAGTTGTTATAATGCAATGCCTCCTCTAGTTGCCCTGTCTCAGCAAATGTATCAATCAGCACACCATAAACAACCACATTTGGCTCAACACCTGAGGCCTTCATTTCATTGTACAGATATATGGCTTCAGATACCAAATAGTTGCGGGAGAGAGTTGTAATAGCAGCAGCATATGTCTCGCACTTTGGTTTAAACCCTGCATATTTCATTTTACCTAACAGCTTCTTAGCCCTCTGTGGATATCCACCCGTAGCAAACATCTGAACTAAAGAGTTAAAGGTGCACTCATCTGGTGAAATACCAGACTCATTCATGTGCTCAAGTAGAGGAGAGACTCTATCATACCGTTTTGCTGCACCATAAGCCTTGACCATCACATTGTATTCAACTATGCCTCTTCTCCTAACTCCTCTATGAGAGTAGAAAACATGTTCGGCTTCCTCCCATAAACCCCTCTCTGCAAAAGCATCCATGATGGCAGCAAATGTCTTGGAAGAGACCTCATCACCTCTGCAATGTCTATCGAAGAATGCATTTGCTTTATCAAGCAACCCCTGATCAATATACATCTTCATGACAACAGGCAGAGACTGTTCAGGAACACAAGTCCCAGACCTCATAATCCCCACAATCACATCTTCTGCTTCATGTACCATCTTTCTCTCACATAACACCCGGAGAACAATCCCATAGCTCACAGTATCCGCAGATAAACCCATTTTCCCAATATGATAGTAGTGCTTCAAAACTCCCTCAACATCACCCTTGGATGCAAACAATGTCATCATCACATTAAACGTCTTAACATCTGGATTAGTTCCCCTAACTATCATGCTAGCAAACAGTGCCTCTGCCTCCTTCACATTACCACACGACCCGAATATGTTGATCAATGTATTGAAGGTACATGTATCCGCCGCAACCCCATAATCTGGCATACCCATAAACATGTCCATCGCATCCTTGAGCTTCCCGGCCTTCCCGTAAAGATCAATCATCGTGTTATATGTGACAGCAAGCTTCGGAATTCTAGCAACTCCCTGAATGCCAGATGCACCAGCATCGTCGACATTGCCATGGCACATCTCCTCAAGCAAGAACTGCATCGGTCCACCTGAATCGAGCGCGCTGTAGTCAAGATCAATGAACCCAACCTCGAACCTGCCGTTGCACCAGTTATCGAAAAGAGTGGCCGCGTCGGAGTAGCGGCCGACGTCCTTGAGGATGCGGACGAAGGTGCTCATGGAAACCTCGTCGGGAGCCACACCTCGGGCGCGCATGTGGCGGAGCAGCAGGAGGGAGTCCCGCGCATGGCCGGCCTTGGCGAGCGCGTCGGCGAGGGCGGCGTAGGCCTGGTTGGTGGGCGGGGGCGCGCCCTCGCGCGCCATCCGCGCCCACACGCGGCGGAGCTCGCCCCACCGGCGCGCGCCGGCGAGGTGGCGGAGGACGACGCCGTAGTGGATGGCGCTGGGCGCGTACCCCGGGAGCGCGCGCATGCGGTCGAGCAGGTCGCGGGCGCGGCGCCAGTGCCGCTGCCGCGACAGCAGCGCCGTCTGCTCGCGCGGGGACATGGTGGCGAGGTGCTCATCGGACGGATCAAGGTCAGCAGCCTCTCCTGCGCCGCCGCCGCCGGTCGGGGTGGGGACAGAGGGGTGGCTCCTGGAGGAGGACAGCGCAGGCGGAGCGGGGAGAAGGTGGGGCAGGTGGACGCGGGAGGCTGAGGGGAGGAGTCTGGACTGTGTTGCAGAGATCGATAGCTCGCCGGAGACGGCGACGGCGGCGGCGGCGGCGGTGGTAGGAGTCAACAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0379400.1 | 7 | 16945713 | T | C |
| Osa07LNT0379400.1 | 7 | 16942093 | T | C |
| Osa07LNT0379400.1 | 7 | 16942116 | A | G |
| Osa07LNT0379400.1 | 7 | 16943212 | T | C |
| Osa07LNT0379400.1 | 7 | 16944793 | A | G |
| Osa07LNT0379400.1 | 7 | 16945856 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0379400.1 | osa-miR5533 | Translation | 5.0 | 18.715 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR5788 | Translation | 4.5 | 9.189 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR5789 | Cleavage | 4.5 | 13.323 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR171c-5p | Cleavage | 5.0 | 18.152 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR171d-5p | Cleavage | 5.0 | 18.617 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR171f-5p | Cleavage | 4.5 | 18.617 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR172c | Cleavage | 4.0 | 11.189 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR166h-5p | Cleavage | 5.0 | 14.993 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR417 | Cleavage | 3.5 | 13.961 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR418 | Cleavage | 3.0 | 6.8 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR443 | Translation | 5.0 | 24.209 | 1 | 22 |
| Osa07LNT0379400.1 | osa-miR528-3p | Translation | 3.0 | 20.833 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR1864 | Translation | 4.5 | 16.0 | 1 | 24 |
| Osa07LNT0379400.1 | osa-miR1872 | Cleavage | 5.0 | 21.041 | 1 | 24 |
| Osa07LNT0379400.1 | osa-miR2867-3p | Cleavage | 4.5 | 17.345 | 1 | 20 |
| Osa07LNT0379400.1 | osa-miR2869 | Translation | 5.0 | 19.149 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR2863b | Cleavage | 4.5 | 9.515 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR2928 | Cleavage | 4.5 | 17.931 | 1 | 20 |
| Osa07LNT0379400.1 | osa-miR3981-5p | Translation | 5.0 | 22.433 | 1 | 21 |
| Osa07LNT0379400.1 | osa-miR5497 | Translation | 4.5 | 21.208 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0379400.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0379400.1 | 7 | nan | Resistance or Tolerance | Other disease resistance | C1226 | R1440 |
| Osa07LNT0379400.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0379400.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0379400.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0379400.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0379400.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0379400.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0379400.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)