© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0380100.1
AATCAATTTTTCTCTTAACACCCTTAGATTTTGGTGTAGTCAGCAGTTACTACAGAATAAGATAATAAATTGCCTATATAAGCCACTGATCTATGCTTTCTGTTGCCGTTTAGTGAACAGTTGTTCTGCTGCACACACCATTAACCCGACTCCAGTAGAGAACGCGACCAGTTTGATCCATGTTCAGTGAAGTCCTCCAGCCGCTTGGCATAATTATCTTCTGTCGTCAACCCATGCAATGTACAATTATATTTACGGCATCGTATATGTTTTCTTTCTGAAAATGCGGTTATCAGGCGAATGCTAAAAACACTCGCAAAACCCTGAATGTTGTTAGACTCATGCAAGTTTGTCGCGGCTCTTCAATGATCTGATTATACTCGTCAAGAACTGCTTTTCACCACGGTATATCTCGAGTGATGAGAAACCCAGGCACATTATGCCTATCGCCATGTGAATGGGAAGGGTCTGCTTGAACCTGTTTCTATTCAGAAACATCCTTTCAGAGAAAGCTGTGGTCAGGCCAGAAATGAGCAACACACCCCAGCCTGCCGGCAAGCAGTGGCGGAAAGAGAATGAGCCCTTGAAATAGTCTTTAATGAATGCCGCTGAATATGTGATTCGCAGCAGCATATTGATGGAATTTGCAGCAATCAACCCAACTGCACCAGCAGATTTAATCAGGACAACATTTAGCACAATGTAAATTGCCGAGAACAGGAGCAACATATCATTTGACTGCTTAAGCTTGTCTTCATTTGCAACAGCATGAAGGAAAGCTTCAGATGTGCCATTCATTGCTAAGCATATGACGTAGAAACAATAGTAACGAAGAATAACTGTAGCATCTCCATCACTGTATCTTGCCCCATAAAGTAGTCTAAGAAGGGTATATGAATAACTTGGACCAAATGAGATGACCACCAAGCCTATCAGCATAATAAGCTTAAGAGCTCCGAGCAAAGAACCTTCCAAATTGGATATATTCTGGGGATTTTGTCCTGATGCCAACTGTGCAAATGTAGCATAAGAACTCTCCTCGAATGGCAGGAAAACTATTCTAACAACCAGACTCCCTAATTTATCCACAAGACCATAGGCAGCCTGGTTATATGGAGTATCAAACCAAACAAGAACAAACTTTTCGCCTTCTTGGAGCATCAGTTTCCTGAAAGTCTGTCCTGTAAACAACATGCACATGTGCAACAACTGTTTATCGCAGTCCATCATGGCTGACAACCTGAATGGAAGGAGATCGGAAATTTTGGTATTTGTAAATATAAGAAAATAGGTCCAATATCCAAAGAAAATGCAAGCTGCATAGACAACCTGTGACAAAGCAAATACAACCAACTTTTCCATTTTAGAATGTCCTTTTGTTATGAAGATAAAAGTTGTTAAACAACGCAGCAGAGTAGCCACAGGTTCAGTATACACTCTTATTTGATAGTATTTCTTCCTCTGGGAGAGAATATACAGAGGTTCTGCCAGTAGCTCCAGTACGCAAGCAAATGCGATAATTAATGTAGCTTTAGCATAGGTATCGGATAACCGCAATTTCTTTACCCTCAACACAAATAAGCTGCTGATAAAGGAAACTAAGATGCCAAATGGGACAATCATCCAAGCTACCTTTAGTATCTCTTCATCACTTATCGCATTGCCACTGTCAGAATCATTACGCAAGCATGCACGCCGAAACCCCTCCCGGCTTAAAAATAGGACGCAGTTGATGAAGAGAGGAAGCTGTAACGCGTATGCCGCGCAGTCGTCGGCGCTGAGCTGGCGCACGAACCAGCTGTTGTAGAGGAAGGGGGTGACCCTGGATAGGAACTGCGCCGCGAAGTTGTACTTGAAGACTCCCATGACGGCGGCACCGGCGGCGCCCGGAGGAGATAACGCCGCGGCGGCCTCAGCACCCGTGGCCATACCGGCGGCGGCGGCGGCAATGCGAGATGGCAGCGCCGCTCGGGGGCGGGACGGCCGCGGAAATCGGGGCACAACGGGGGTCCGGCCGGCACAGAAGCTGCGGCGGAGTGGGGAACTTGGGAGTTGGGAGGGCCAAGGAGACCTCTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0380100.1 | 7 | 17887628 | A | G |
| Osa07LNT0380100.1 | 7 | 17886743 | G | T |
| Osa07LNT0380100.1 | 7 | 17881337 | A | G |
| Osa07LNT0380100.1 | 7 | 17881538 | A | T |
| Osa07LNT0380100.1 | 7 | 17881631 | C | A |
| Osa07LNT0380100.1 | 7 | 17881887 | C | T |
| Osa07LNT0380100.1 | 7 | 17883099 | T | C |
| Osa07LNT0380100.1 | 7 | 17884125 | T | G |
| Osa07LNT0380100.1 | 7 | 17885332 | C | T |
| Osa07LNT0380100.1 | 7 | 17885571 | G | A |
| Osa07LNT0380100.1 | 7 | 17885633 | G | A |
| Osa07LNT0380100.1 | 7 | 17886030 | A | C |
| Osa07LNT0380100.1 | 7 | 17886483 | C | A |
| Osa07LNT0380100.1 | 7 | 17886527 | C | T |
| Osa07LNT0380100.1 | 7 | 17886689 | C | G |
| Osa07LNT0380100.1 | 7 | 17883632 | T | C |
| Osa07LNT0380100.1 | 7 | 17881592 | A | G |
| Osa07LNT0380100.1 | 7 | 17882774 | A | T |
| Osa07LNT0380100.1 | 7 | 17883293 | A | T |
| Osa07LNT0380100.1 | 7 | 17883180 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0380100.1 | osa-miR5539a | Translation | 4.5 | 13.436 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR5832 | Cleavage | 4.5 | 20.801 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR2873c | Translation | 3.5 | 17.864 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR7693-5p | Cleavage | 3.0 | 21.974 | 1 | 24 |
| Osa07LNT0380100.1 | osa-miR7693-5p | Cleavage | 4.0 | 17.915 | 1 | 24 |
| Osa07LNT0380100.1 | osa-miR5539b | Translation | 4.5 | 13.436 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR156b-3p | Cleavage | 3.5 | 17.164 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR156f-3p | Cleavage | 4.0 | 17.164 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR156h-3p | Cleavage | 4.0 | 17.164 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR156l-3p | Cleavage | 4.0 | 17.164 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR435 | Cleavage | 5.0 | 15.241 | 1 | 20 |
| Osa07LNT0380100.1 | osa-miR1857-3p | Cleavage | 4.5 | 11.319 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR2871a-3p | Cleavage | 4.0 | 17.323 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR2871b | Cleavage | 4.0 | 17.323 | 1 | 21 |
| Osa07LNT0380100.1 | osa-miR5149 | Cleavage | 4.5 | 12.371 | 1 | 22 |
| Osa07LNT0380100.1 | osa-miR5492 | Cleavage | 3.5 | 12.448 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0380100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0380100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0380100.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0380100.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0380100.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0380100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)