© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0380400.1
AAGTCACCAAAAAATACTTTCAGAACCATGATCTTTACAACGCTAAGCCAGCCACCTGTATTTTTTTTTACCAGCAAACAAATGCTACGGTAAGTGTCAACCTTGTACATCTCGTACCAAAACGAATATTTTCTCCAGAAGAGACAATGATAACGGATACTCGCTTCAAAAGGAAGCACCATAAATAAATTGATGTGGGGAAGTTTCCTCAGCTCTGGTGCCAAAATGTCTCAAGGTAGGGCGTCAGCACTTCCACAAGTGGGGAGGCAGGTAAGTATGCCATTGAAACTATGCCATTGGTTGTCGCCTCCTTTTTGGTCGGATGCGGTCCTCTTCAAAATCCATTATTCCTCCAGGTTCAGAGAGAAAGTCGTCATGCCCCCGTAAGTCGATGTCTGCCTTGATTGATTTTTTGGCTTCTTCTACCTTGTCTTCGAACTCTTTCTGGTGCTTCTTGTTCACTTCACTCATTGTATCAGCCCACTTAATTTTCTCCTGAATCTGATGCAATAAATTATCCGATGTTCCCAGCCAGTCAGATAATGTATCTATCATATTGTTCAGCTGATCAGGTGTAAGATCCCTTCCAGTTGCAAATTGTACCTCAAAACACCTCCGCAGCTGATCCAATTTGCCCCTGACAATACCCGAGTACATGCACTCATTGATGAGGAAATCTTCGAGTTCTCTTACATTGGAAACATCCAATTCTTGCATGAGTTGATCATATGGTAGCACCTTGGTTGACTCAGCCAAAGTTAGCACGCTGAGTTGCTTCAGCTTCCGGACTTGATCAGGTAACAATGCAGGGAGATTGCCAGAATTACTCTTGTAGTCCTTCAATGTCCCATAGGCGAAGAGGCGGAGCACGTCCAGAGACGACGCATACTGCGTTCCAGTGAGCTTGGAGAGGGCGGGGAGGGAGAGGAGCTCGGAGAAGGCGAAGAGGGCCGGGTGGGAGGTGGCCTCGAGCACGAGCGCCGCCAGCTGCGGCGCCGACGAGGAGAGGGCGGCCGCCTGCGCGGAGAACTGCTCGATCAGCTCCGCCTGCCGCCGCTCCGCGTCCATCGCCATCGCCGCCGGCGATTTGCCCGGGGGGCTAGTACGCGCTAGGGTTTGGGGGATCGGGGTTTCGCTTTCTTTTCGGTTTCGTTCGCCTCGGTGATATTCTCTGTGTTTTGTGGGATTGTAGTGGGGAGAGTGGGTTTCGGGTTCGGTTGGGCTCCACGGTGGTGGGTGGTGCTGGTGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0380400.1 | 7 | 18254469 | C | G |
| Osa07LNT0380400.1 | 7 | 18254055 | T | C |
| Osa07LNT0380400.1 | 7 | 18254213 | G | C |
| Osa07LNT0380400.1 | 7 | 18254338 | C | G |
| Osa07LNT0380400.1 | 7 | 18254598 | T | G |
| Osa07LNT0380400.1 | 7 | 18255324 | A | T |
| Osa07LNT0380400.1 | 7 | 18255360 | A | G |
| Osa07LNT0380400.1 | 7 | 18257557 | C | A |
| Osa07LNT0380400.1 | 7 | 18257598 | T | C |
| Osa07LNT0380400.1 | 7 | 18257805 | A | G |
| Osa07LNT0380400.1 | 7 | 18257941 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0380400.1 | osa-miR5543 | Cleavage | 5.0 | 15.951 | 1 | 21 |
| Osa07LNT0380400.1 | osa-miR1875 | Cleavage | 5.0 | 11.505 | 1 | 24 |
| Osa07LNT0380400.1 | osa-miR1846e | Cleavage | 5.0 | 20.652 | 1 | 20 |
| Osa07LNT0380400.1 | osa-miR1846e | Translation | 5.0 | 20.295 | 1 | 20 |
| Osa07LNT0380400.1 | osa-miR5496 | Cleavage | 3.5 | 19.785 | 1 | 21 |
| Osa07LNT0380400.1 | osa-miR7692-3p | Translation | 5.0 | 22.826 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0380400.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0380400.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0380400.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0380400.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0380400.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0380400.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)