© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0380500.1
AGAAAACGTTTTATTGCAGGTTTATTTTTTTAAAAAAAATGGACCAAATTATATACAAAGCTCATTTTATACCACTAGGCACTAGCGTACAAGGATCATCGCAAAAACAAGAGGCAATGATCACATAACCCGTACTCAATCCATCCCATAAAGTACATAGCTAGAAGTTGATATTTTTTTTACAAGACGGAGGATGTACGTTGCATGAGGGATGTGACTGAGTCTCCCATAGCTGGTTATTTTGTGGGCCGAGCCAGATTCCCCAAAGAGAAGGCCCGGTTCGTTTCTTGGTTGGCCCTTGTGGCCCAAGAACAGCCTGGTAATGTAACAAGACGTTTGCTCTAACCACACCATGTCCACGGGAAAAGTACATCGATATGTACAGCATGTACAGTTAATATGAGGAACTTTCACCAGCGTTGCTGTATATATGGTCCCAATTCTGAGACTGAGCTTGAAATCATGTGTCCCCTGCAGGTTCAAGCAGTGAAAAGTCATAGAGATTTGTACTTCTCGATAAGATGCGACGCGTGCAGGCGAGACGTGGGTGTGATGGTGCACCCCAGGTTCCGGAGGTACGATATCTGCTTAGGTGTAGGTTCTGAGGAACCCATGGAGTTCTCTATCCTCTGCTTTTGGAAATGTTCCTGTCTCTCTCTCATCAAATGGCTCCGCTTGTCGATAGGAATCTGTTCCCACTTGATAACATATTGTGCATAACCAAACGCTTCATCACCACTTAAGAATGATTTCAGCTTGCACAATACATCCTTGCGCTTGTATCCTTTACCTCGTAAACGTTCATCAATAACAAAACCAATCTTATCAAGCAGCCTTTTTGGATTTTGAAATGCCTGTTTCTTCGCCCATTGATGAAATATATGTGAAATTATTGCTCTATCCTCAATTTCAAACCTCTTCAAGAAATCATTAGCAAGACATGGCTGATCCATTTCTGGGAAAGGTGAAGTTTCATTCCGTACCACCATAGGCCTTTCAACTGATGTATCTCCTTCAGGTTGATCAAATGGAATGTTCACCGGCTGTTCAGGAGTTCTTCTCACAGTTCCCTCACCCTGTACCTCAAGAAGGTGAGCAGGAATCTCCCTGAGGAAGCGTGAAGGTTGCAGCAGCTGGCGATTAGAGTCAACCGTGACATGTAAGATGTACAGTTTCTTTCGAGCTCGTGTCATTGCAACATAGAATAGCCTTCTCTCCTCCTCCAGTGTGCTTCCAGCTTCTTTCACAGTGCCATTGTACTCATGCAACAAAGGAATTTCTGAATCATTTGCCTGCACGATAAACACAACATCCCACTCTAAACCTTTTGACTGGTGGATAGTTGTTAATGTGATAGAGTTTTTATTTTCCTCCTTTCGTGATCTGAAGTTTTCAGTTTCTCTCAAAGAGATATAATCAATAAAGGCTTTAAGTGTAGAAGCACAGCCTTTCTCCTCAGTCTTGCTTGTATCCACTGAACTAGAAAAATGTGTTGATAAGAAGTCAGACACATCATCCATTAAAAACTGAAGGACTGATCTGATGTCATTATCTTCATTTAATAATTTACCCCCATCAGCATCAACAATCGCACGCTTTTCAAGTAGGTATTTCTGAGGTAGCATATCTCCAGCAGAAGAAATGACCACTGAAACTGATTGTTCCCTTTCAACAAGTTTTGATAGGCTATCCAAGGCTGATAAAACCTTTCTTCCTTGAGTAATCTGGGCCCTTTTGAAGGTACCAGAGACCTTTGCACTGAAGATGTCAGTAGCAGCCGATATGAAGCTACACTTTCTAGCCAATGAAATCTTTTCAATATGATGTATAATCTTCTTTTTTTCTTCCTTGTCACCAGGAAGAATGGCCTTGAAGGCTTGATGCCATGGGGCATCATCATCACAGCCTGGTAATGTAGTTTTAAGTATGGCCATAATTGCTTTGATAACCTTTTTCCTGTAGAAAGCCACACCATGAATATTAAAAGGAATTTTTCTGTTGCGGAATGACGCCTGGAATGCTTTGCCAGTGATCTGTCTGCGATATAGGACAGCAATTTTGCCAAAATGACATCCTTCAACTGAACTAGATGTGGTTTCAATAATCTTGTCAATAACAAATGCACATTGTGAATCTTCACTGTGGCACTCCTTAACAATGATCTTATTCCCAGAGGGATTGTCGGTCTCAGCAAGTTTGTGGCTTTGCCGTTTAGTGTTGTTGTGAATTAAAGCTGTTGCTGCTTCAACAATTGCCCGTGTAGAGCGATAGTTCTTGCTCAATCTGACCTCTTTGTGATTTGGAAAATCTCTACGAAATGAATCAAAGCCAGAGACATCAGCACCATTGAAACTGAAGATGGACTGATCTTCGTCACCAACAATAGTTATGCGGTTGTGGGATGCTAGTGTCTTTAAAAGATAATATTGCATAGCACTTGTATCCTGAAACTCATCAACTACTATTGCCTGCCATGTATTTCGGCACTCGTCGTATACTTCAGGAAACTTTGTGAGAAGGGTTATCGATGAATTAATAAAATCATGGTAATCAAGAGCATTACAAGACCTTAATATTTCATTGTAGTGCCGAAGAATTGAAGCTCCTGTCAAATCCCCCTTCTTTTCATACTCCTCGGGAGTCCTACCAGAAGCTTTTGCCTGTGTAACAAACTTCTGCCATTTCTTAGCTTTGTCCTTGAAAGAATTTTTAATATCTCCATCGCAATTCTTATTTGCATCTCCTAGACCATTATTTTTGTCACTTTCCAATAGACGCTCTGCCTCAATAACAGCCCTCCTCTGCTGCCCATTTCCATAGATTATGAATTCAGATGTGCGGCCTAGCTTTTCAGCATGGGTCCTGCAAAGCTGCAAGCAGAATGAGTGAAATGTGCTTATTACAATCTCCTTGGCAACTGCCTTCCCCACCACTGTCCCAATTCGATCCCGCATTTCAGAAGCAGCAGCAGTTGTGAATGTCATAGCAAGAATGTTTGATGGTGGAAATTCCTCTTTGAGCAGTGTGAGCACCCGACCAACCATTGTTGATGTCTTTCCACTTCCTGGACCAGCAACTATCATTAGTGGAATAGTCACATCACTACATGCAGCTTCCCTCTGCCTGTCATTCAGGGACTGCAAATATTCGTAGTACTTCTTTGGAACACACCCTTCATTTTCCTCAATTTCTAGTTCCGTTTCCTGTGGCTCCTCCTGGCCCTTGGTAGCATCACCCTGATGGATAGCATCAAGATCCTCCAAGAATGCATCGACAAGCTAAATATTCCCCAAGAGAAAAGGAATTAAACACATTTTTCTTGATTCCAAAGCAAACCTAGTAATTCAATTTTTAGTTTCCCAGTTCACCTTCCGAGAATGAGGAAACATGAATTAGCCACCACCGAACAACTGTTCATCATTTATTTGTCGAAAGTTAAGAAATGAAGCAAATAAGCCATACCTCTCCTTCCCGCTCTTCATGGCAAATTACTGAGGGAACTGAAGGACCATCGCTATTTTTTCCGTCCATATCCTCCTGGCACTTGGCAGAAGAGCCTGTATGGTGCACCTCCTCAGTAATGTCACTGATGTTCCAGAATGCATCCTCAAACTCTCCACCCCCTGTGGCAATTGAAATGGCCGGTGGAAGTGAATCATCACCAAACCACAGTTCACAGATTTCTTCTTCATCCGCATCCTCCATTTCTTCCTGGCTCGTGGCTAAAGGCTGAGCATCACCCTCCTCACCAATGGCATTCTCCTCCTTCCGGAATGCATCTCCAGACACTCCGCTCTCCGGTTCGGAGGGGATCGATGGCGGCGCTTCGCCGGCCTCCTTATCCTTCCTGGCCGAGGACCGCTCGTGCTCCTCGCAAATGGCGTCCACCTCCCGCAGGAACGCCTCGTCCATGCCTTCGTCGTCGTCGAGAAGGAACCTGCAGGAGGGCCTGGGCGCCTTCGGGGCGGGGGTGCTGTACCCGTACCCGCATCCTCCCCCTCCGGATCCCCGCTGCCGCAGGGCGTTGCCGGTGACGTCGGCGAGCGGGCGGCGCGGCGGCGGGCACGGGGGCTGCGGAGGGGGCGGGGATGGGGGAGGGCGCTTGCGGGGGAGGAGGGAGGAGGAGCCGCCGGGGTGGAGGGGGAGAGGGGAGGCGTTCTCCTTCCAGCGCGACATTGCCCCCCAGCGACCGCCGCGGCGATCGACGGCGGTGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0380500.1 | 7 | 18338247 | A | T |
| Osa07LNT0380500.1 | 7 | 18339281 | G | A |
| Osa07LNT0380500.1 | 7 | 18339559 | G | A |
| Osa07LNT0380500.1 | 7 | 18339784 | G | A |
| Osa07LNT0380500.1 | 7 | 18340346 | A | C |
| Osa07LNT0380500.1 | 7 | 18340388 | C | T |
| Osa07LNT0380500.1 | 7 | 18340948 | A | T |
| Osa07LNT0380500.1 | 7 | 18341507 | A | C |
| Osa07LNT0380500.1 | 7 | 18341584 | T | A |
| Osa07LNT0380500.1 | 7 | 18342632 | G | A |
| Osa07LNT0380500.1 | 7 | 18342642 | T | C |
| Osa07LNT0380500.1 | 7 | 18343102 | C | A |
| Osa07LNT0380500.1 | 7 | 18343284 | T | C |
| Osa07LNT0380500.1 | 7 | 18344279 | C | T |
| Osa07LNT0380500.1 | 7 | 18344528 | T | C |
| Osa07LNT0380500.1 | 7 | 18344944 | G | C |
| Osa07LNT0380500.1 | 7 | 18345066 | A | G |
| Osa07LNT0380500.1 | 7 | 18345539 | A | C |
| Osa07LNT0380500.1 | 7 | 18346428 | T | G |
| Osa07LNT0380500.1 | 7 | 18346521 | T | C |
| Osa07LNT0380500.1 | 7 | 18346740 | T | C |
| Osa07LNT0380500.1 | 7 | 18347029 | A | T |
| Osa07LNT0380500.1 | 7 | 18347126 | A | T |
| Osa07LNT0380500.1 | 7 | 18347455 | A | G |
| Osa07LNT0380500.1 | 7 | 18347629 | C | T |
| Osa07LNT0380500.1 | 7 | 18347762 | T | A |
| Osa07LNT0380500.1 | 7 | 18347874 | G | A |
| Osa07LNT0380500.1 | 7 | 18349211 | C | T |
| Osa07LNT0380500.1 | 7 | 18349299 | A | G |
| Osa07LNT0380500.1 | 7 | 18349335 | A | C |
| Osa07LNT0380500.1 | 7 | 18349463 | C | T |
| Osa07LNT0380500.1 | 7 | 18349527 | T | C |
| Osa07LNT0380500.1 | 7 | 18349909 | G | A |
| Osa07LNT0380500.1 | 7 | 18350179 | T | C |
| Osa07LNT0380500.1 | 7 | 18350367 | A | G |
| Osa07LNT0380500.1 | 7 | 18350508 | A | C |
| Osa07LNT0380500.1 | 7 | 18338440 | T | C |
| Osa07LNT0380500.1 | 7 | 18345907 | T | A |
| Osa07LNT0380500.1 | 7 | 18338641 | T | G |
| Osa07LNT0380500.1 | 7 | 18344160 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0380500.1 | osa-miR5534b | Translation | 4.5 | 13.092 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR812v | Cleavage | 4.5 | 9.775 | 1 | 24 |
| Osa07LNT0380500.1 | osa-miR5834 | Cleavage | 4.5 | 11.521 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR5837.1 | Cleavage | 4.0 | 14.297 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR7692-5p | Translation | 4.0 | 15.335 | 1 | 24 |
| Osa07LNT0380500.1 | osa-miR171i-5p | Cleavage | 4.5 | 20.974 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR528-5p | Cleavage | 5.0 | 9.461 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR810b.2 | Translation | 5.0 | 14.185 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR1866-5p | Translation | 5.0 | 15.99 | 1 | 24 |
| Osa07LNT0380500.1 | osa-miR5076 | Cleavage | 3.0 | 9.364 | 1 | 22 |
| Osa07LNT0380500.1 | osa-miR5145 | Translation | 4.5 | 20.441 | 1 | 24 |
| Osa07LNT0380500.1 | osa-miR5151 | Cleavage | 5.0 | 13.092 | 1 | 22 |
| Osa07LNT0380500.1 | osa-miR5338 | Translation | 4.5 | 19.547 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR5488 | Translation | 5.0 | 20.947 | 1 | 21 |
| Osa07LNT0380500.1 | osa-miR5498 | Translation | 5.0 | 17.766 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0380500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0380500.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0380500.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0380500.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0380500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0380500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)