© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0380600.1
ATTCCAGTTTTCAATTGTTTCAATCGATCTCTAGATCTTGATGGTACTAACAACCCATTCAATATAACTTGATTGTTTCTAGGAAGGGATGATCATGGACGTAAGTAATACATACACTTGATTGTGAATCAATGAGAGTTTCTTTTGTTGAACGACTGAAAAATTTCTACTGCACTTTTGAGTGAAATGATGGCGAAAAGAACACAGTGAAATCAAGAACGGCCTGCTGCTCACCGAGTCAAGGAGGATGTTGGATGCCTTGAAGACGCTAGATGACCGGTGTGTCGGCGTAGTGAAGGAAGGCGAGCCCCTTCACCGCACCAATGGCAGTCTACATCCTCCTCATCCATGGTACAGGACTATCGAGACCTCTCTCCTGAACCCCAGTTGTTCTCTTATTTGCTGCTGGACCAATGCATTCCATTCATTCCAGTTATTGCATCAACTTCTGCTACAGGATCACTAACAAATTTCACAATTCCATAAACCTATTAACACACCCTTAACTGAAAGGCAATGGACCCTAAATGCCTCTTGTAGCATGTAGTCTGCAATATCTGCAGCCAGATCCCAACTACAATGGCCCAATTCAATCGAAAGACCATCTCAACATTCAGCATCATTTGTGCAGTGTCCACTATATGTCTGATGAAGAACTTGATCAGCAGCTGCCTGCAACGCTTGTAATCTCAACAAAGTCATAACCCTGAAGTTGTCCACTTTGTTTATCCCAGATAAGCTTCACAGATTGAACACTATACAGAGTGCGGGATGAGCTCGCGCAATCTTTTAGCCCCAGCTAAAGCCCACAAGCTGGCCTCCTCTTTGATTTTTGCTAGGAGAACACCTGTCTGCAAACTTAGCACCCATGTGGAAACATGTGGAAACAATAGATAAGTAGAAACAATCAAACAAAACCTTCCAAAGCCCATAAATTAGAGGAAGTAACCTGTTCATATTTCATGGGCACAGCTCTAGAAAAAAATAATCAGAGATCAGATTGAACAAATATCTGCTGCTGCTAACAGGTCAACATCTATCTAGCCAAAAGCAAAAGGGTTGCAATAAAGTTAAGTGGAACCTGTATCATAAAGATTATTTATTCTTCGTTAAGCAAAATATAAAATGCAACTATTGAATTGCAGTGTGATAAGACACTGCGCATGTTATGAATAAATTAGACTTTGTACACCTTTGCAATCAGTATTATTATGATCAAATCCTTTCCAAATTGCTCTAAAAAAATTGTATCTCATCAGTATTGCTCCGATAGAAATATATTTCCAATCAGCATTGCTCCTATCAAAATTAATTGAGATACATGCCCTGAAAAAGTATATAATCACATCCAAAGTTTAATTACAACGATAATATAATCATGTGTTTGCAGAAACCTCAAAAATATGGATTATACATAAATTGAGCTGTAAGAAGCATGCATGAACTAAAAGTAAAAATATAGTTAGAATATGTATGCCTATTGCAAACTAAAATGCAATCTTAAAAATAAAATCATGTTTACCTTGAAGCCAATGTCACATGGATTGAAATTCAATCTTTAAGCTCAAAATAGGGTGGTAGGCTGAGGCGAGGAGATGATTGACCTAAATACCTACAGGCGCACAACTCAAATAACTCCCACCTTAGTACCTGATAATATCACTGGCTTATTTGGAGCAGCACACATCTGTTCTACTTCCTCCGTTTCACAATGTAAGTCATTCTAACATTTTCCACATTCATATTAATGTTAATAAATCTAGATAGATATATATGTCTAGATTCATTATCATTAATATGAATGTGAGAAATGCTAGAATGACTTACATTATGAAACGGAGGGAGTAACTTCTAAATCACCTTGCGGTGGCTGTCATTAATCAACCCAGTAATATTACCCTCCACTTTAAGTGTTTACTTCCAGAGGCTCACATGAAGTAGTCACATTCAAAAATAAATATAAACATTACTTAACTGAACCTAACAAACACGTTCACATATTTTACTGTTCACCAAAAGAAAATGCAATTATTTTGCCTGGTGATGTTACAAAGAGTGCAGAAGACAAGGAAAAATCTGAAACTAAATAAGCAAATATCTGCTACTGCTACTAACATGTGACATCAATTCACTCAAAAGGAAAAGATTAGACATTAAGTGGGATTGGAAATTTTTACTACATGTGTTCGTAACGATTTAAATGCCAATACTAAAAATTAAACTTTGATGAAAAAACTTTAAAATTAAGTTTTAAAATTTAAATTTTGGCAGCGGCTGATTTTGTATAGAGGAAACGAGGGGAGAGTGTTCGGATCACCTTTTGGTTTTACTTTTATTGGGACTTGCATGTTGTTCTGGAACTGAATTTGGCAAGGGCACTAATTGGGTCAGATATATGAACCAAAATTAGATAAAGCCTTTATCTCAGCATGACACGACAATGAATCAACAGCTTCGCAGTCCTGGCCGGGAGCAACTCAATGAGACCCTGCTCCTACCTACCCGCTGGCAGATTTACTGCTCCACAAGCTTCATACTGCAGGCCAAACAATTGTCCGGCTGGAACTCAACATAAATTCACCTTTGTCTTAGACAGGAGCAGCGAGGGAGACGTGATCCGGATGAGTTTGCGTAGGGGGGGCAGCGAGGAATCGCGGTGGCGGCGCAGTGGACACCGGACATCGAGGGATCGACGGCGACCGGACAGCAGGAGATCCGGTGCCGGCGCGAGGCTAATGCGGGGATCGACGATGGCCGGACTGCGTGGGATCGACGGCGAGGTGCGATGCAGACACAAGGGCGAAGCGGCTCGACGGAGACTAGATGACGATATATCGACGGCGCCCTGACAGCGGGGATCCGGCAACGGCGCGAGGCGGCGAGGGAGAGGCAGCGGGGTGGTGCTGGGAGGATCCAACACTTCGTATAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0380600.1 | 7 | 18467174 | C | T |
| Osa07LNT0380600.1 | 7 | 18466813 | A | G |
| Osa07LNT0380600.1 | 7 | 18470316 | A | G |
| Osa07LNT0380600.1 | 7 | 18470842 | G | A |
| Osa07LNT0380600.1 | 7 | 18468879 | C | A |
| Osa07LNT0380600.1 | 7 | 18466807 | T | G |
| Osa07LNT0380600.1 | 7 | 18469233 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0380600.1 | osa-miR2873c | Cleavage | 4.0 | 11.231 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR5837.1 | Cleavage | 3.0 | 23.424 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR5337b | Cleavage | 4.0 | 13.693 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1861o | Translation | 4.0 | 14.246 | 1 | 22 |
| Osa07LNT0380600.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 15.761 | 1 | 20 |
| Osa07LNT0380600.1 | osa-miR319b | Cleavage | 5.0 | 15.761 | 1 | 20 |
| Osa07LNT0380600.1 | osa-miR169f.2 | Cleavage | 5.0 | 15.761 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR171c-5p | Cleavage | 5.0 | 12.978 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR426 | Cleavage | 5.0 | 22.118 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR426 | Translation | 5.0 | 19.035 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR444a-3p.1 | Translation | 5.0 | 23.234 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1428a-3p | Translation | 4.5 | 16.441 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR444d.1 | Translation | 5.0 | 23.234 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1436 | Cleavage | 3.0 | 10.778 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1439 | Cleavage | 3.5 | 11.823 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1861a | Translation | 4.0 | 14.246 | 1 | 22 |
| Osa07LNT0380600.1 | osa-miR2120 | Cleavage | 5.0 | 14.531 | 1 | 24 |
| Osa07LNT0380600.1 | osa-miR2918 | Translation | 5.0 | 20.792 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR5073 | Cleavage | 4.5 | 8.838 | 1 | 23 |
| Osa07LNT0380600.1 | osa-miR5150-5p | Cleavage | 4.5 | 20.474 | 1 | 24 |
| Osa07LNT0380600.1 | osa-miR5486 | Cleavage | 5.0 | 13.326 | 1 | 21 |
| Osa07LNT0380600.1 | osa-miR1861c | Cleavage | 5.0 | 14.246 | 1 | 22 |
| Osa07LNT0380600.1 | osa-miR1861n | Cleavage | 3.5 | 14.246 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0380600.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0380600.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0380600.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0380600.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0380600.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0380600.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)