© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0034800.1
GCCGTATATCTTTAAAAAACCAGCCAACCACAACCATTATTCTATACCAGCAGAGCGATGCGATTCATTTTCTTTAATCATTTACAACACATGTACAGCTTCACTAATTATAGCAAAACCTCCTAAGCTCTATGCTTACACAAAGGCGTTTTGCCCCTTGGCCCCTTAGTATACAAGCCCAAAAAGAATTGCAAAGAAACAATGCAAGGAAAAAGTGAACACAAATATACAACCAACGAACCAATCAATAAAAATCAGAAACCTATAACCTCCCCTAGCAATCTACTCTTCAATGGCCTGCTATCTGGTATAAAAATGAATTATGCGAACTGTACACCCTATCCTACGGATAGGAACAACTGATTTATCCACAACTTGCAAGGCTCCATGGTGAGAAAAGTTAACTGTTCCCCCTTTGCAATAAAAACGCAAAGCTTGGGTTTTCACGAACAAAAGGTAGCAAATCATCTTCAGCCACCTCAATGATTGGCATTGTCTTTGCAATATCATCAAGTGAAAAAGGTATGCATGAATCATCATCTAGCAGTATGGAAAAGGTTGTGACTGTATTTGATTCCTCGCGTACTGCACTTTTCAAGCTTGATGTGAACTCTGCTGAGATAGCGTTTGAACCATTGATGTCATCCCAGTACATACTAACTATGCGCTCAAGCTGTTGTATGCTGAGTGCAGGGCACACATCAGTGCGTATCTCTTTCAGTGTCCTCATTGGTTTGAGGGAAATCACCAAGAAATCAACAGCCTGTCTGATATGCTTCAGTGCATCCCAGGCTGAACCTGCAAACTCTCGAGTAGCATTGTCTGACCAATGTTTTAGTTCAGCTAGTCCAACTTTCACATATTCCCCATTGCTAAATGAACAACACTCCCGCCGCAAAAGGAGTCTGTTAAATAGTTGAACATCAATCAGCGAAAATATCTGTGTGAATAGCTTGTGCACCAAAATTGATGGAACATGGTTTGCCCTTAGAACATCCAAATAGTTGGTGAGGACCTTTACAATGGCCAACCAATGTCCAAGCTGATTTTTTTGCCCCAAGCCATTCGCATGTCCTTTTGCTGGACTGTGAGAAGTTCGTGGATCCTGGATACACAATTCAAGCAATGGATTTAGTTCCTTCTTCACACTGTCACTTATCATACCATAAACCTTCTCAATTAGATCCACAAGCTGTTGCTTGAAGAGCAAAGCTGGATATTTTGCCTCAACTTGGGGTAATCCAGCAGCTCCAACAACTGGTTGGCCACTGAGATAAGCAAGCCCAGCATTTGAAGTTTGACTTGCATGAAAGATCCTCTCAGATGAAAATCTTCGCCTTTGTGGGGTTGAGATTGCTGTCCTAGTAGTTTTGAATGATCGCTGGAGGAGAACTGTTAATGTAGACAAGTTGGATAACCAATAGGCCAATGCTCTTGTATCATTTTGGGCCTTCAAGGGAGGGAAAGCTACCATCAGGACATTGCATGATGTAGACTTGCAAGGAAGATATACTACATAAGTTATTGCGATGTGATTCATTTTCCTTTTGTTTTCATGTTTTGCCAACATTTCAACGTTTCCACAGTAACTGTGAATTAATCTTACCTCTCCTGAATTTTATGTACATGTTAGATGTTGTAAACTATGAAATTGGATAGATAAGATTCTCTGTAGTTCTGTAGAAATTTGCAACACAAAAGTGTGCTCTATGAAAATCAGTACTATATGAGAAAGATAAGGATACTATAAAATTTAAAAACTAAGTGCTAGGAACCTCGGTTGCTGAATTTATAGCCTGTAGGATGCTGTCAAAGACACCAGTCTTCATTGCTTCAAATGATCTCCAATGAGAGAGACATTGATATATAAGAAGCGCAGCAACAGGCTTGCTCCCGAAAAATCCAAGATATTGTGAAATGCAAGTGAGTAACCACTGCTGATCGTCCTGAGGCTGCTGACTCTGAGGAGACTGGTATTTCTGATTAAGTACTTTTTGTAGTTTCTCTCCTTGTTCAACATGTTTTTCATTATTCAAGTCAGGAGGATTGCCTATTGAAGGTATCGTTTCTGATGTGCCAGTTGAGGGCTTTATTTCAGCTTGTCTTGTGTCACCATTCAAGATATGTCCATTCTCTGGGCTTCTATGAATCCTAGTGATCTTTGAGCGTGAAGCTGAAGATTTGGCTGTTGATGGTGGAGTTGCAGTTGCTTGTTGACGGAGAACTTGGTTCTCAGCTTCTAAGTTCGTTGATTTTCCTTCCAACCTTTGTAAGGTCTCTTGAAGTTGAGTAATAGTTTTGCTAGACTCTTCAATTTTCTTAATCAAGTCATCATTCCGTTTGAGGAGGTCCTCATTTCTCTTCAGTAGATCTTCGTTTCTTTCACGAGCTTCAGTAAGAGCTCTCTTGGCCGCATCACTTTCTTGTTTTTCCATAACAAAGGAAGACAATCTTGAAATGGCATCAACTTGAAGCTTTTGTGCTGTGTCTTGGAGTAGGTGGATCCTGTATTCATTATCACTAATTTTCCTGAGTAACTCTTCATTTTTCTCTTGAGCTTCAGCAAGAGATTTCCTGATTGTGTCGTTTTCTTCCCTTGCAGCTTCCAAAGAAATATCTTTTGCTTCTATATCTCCTTCAAGCTTGATTATGGCATTCTGAAGATGTTCGATTTTTTTATCAGTGTCTTCAATTTTCATTATTAACTCTTCATTTCTCTCTCCAGCTTCAACAAGTTCTTTCTTAATTGCATCCTTCTCTTGTCTCTCTGATAGCAACAAAGCATCCTTTATCGTTGAATTTTCTCCGATCCTTTCTATGGTATCTTGAAGAAGATCAATTTTCCTGTCAACATCCACAAATCTCTTTAGTAATTGTTCATTTCTTTCTTGACTCTCAATCTGAGCCTTTGTTGTTGCATCATTTTGTTCCCTTTCTCTCAACAACAAGTTCTCTTTTGCAGCTGTATTTTCTTCAAGCCTCTGTATAGTAAACTGAAGCTCAAGTATATGTTTATCATCATCATGAATTTTCTTGAGGAGTTCCTCATTTTTTTCCAAAGCTTCAGTGAGAGTCATCCTTGTTGCCTCATGTGCTTGCTTTTCTGTTAATAGTAAAGCCTCCTTGGCAATCCCATCTTCTTCAAGCCTCTGTAAAGAATCTTGAAGCTGATTGTTTCTCCTATCAGCATCTTCAAGGTTTCTTTGTAGCTCCCCAATTTCTACCTGAGCATCAGCTAGTTGTTTCATGATTGCACCATTATGCTGTCTCTCAGCTTTCAATGAATTCTCTACTGCTGTCACATTTTCCTCAAGTCTTTGGGTGGTGTCGTGATAGTGAGCAATGCTTTTATCAGCATCTTCAATTTTTTTGAGTAGTTCCTCATTTTTATACTGTGCTTCGCTTAGTAATTTCTTAGTTGCTTCAGTTTCTTGCCTTTCTGTAGTCAATAAAGCATCCTTCTCTGTTAAACTTTCTTCAAGCCTTTGTATAGTAGTCTCAAGTTGAGTAGATTTTTCATCAGTATCCCCAGCTTCTCTCAGAAGTTCATCAATTTTAGCTTGTGCTTCAGCTAATTGTACCACAGTTTCCTCATGTTGTTGCTTTTCAATAGTCACTGAAGATTGTAATTTTGTAATGGCCTCCTCAAATCTTTGAACTGTTTCCTGAAGCAGATCGATTTGTTTCTCAGCATCTTCAAGCTTGCTTGCAAATGCTTCATTTCTTGCTTGAGATTCAGCTATTACGGCACTAGCTTCTTCCTTTTCCTGTCTTTCTGCTAGCAAAAGGGCCTCCCTTTCTTGTATAGTCTCCTCTAGTCTCTGCACAGTATCGCTAAGCTGCTTGATTTTTCCATCTGCATCCTCGACTTCCTTGCTCAATTCTTCATTTCTTTCTTGAGCATTAGCATGTGCTTTCTTAGTTAAATCATTTTCCTCTTGTTCTGCTACTAGAAGCGCCTTGAGTCCTTCGATTTCAGAAGTCAATGAACTGATCTTTTCTCTTTCTTGCTCAAGAGCTTCCTCAACAGCCTTTTTAGCTGATTCTCTTTCCTGCATTGCTGTGACGTCTTGCATTCGCTGTTCCATTTCATTAAGAGCGGCCTGCAATTTAGAAACTTCTGCTACTTTGGACTTCTCCAGATCTGTCCTTAATTTCTTTTCCAGGCCCAACCGGTTTGTTAGCTCCTCCACACGTTCCTCCAATTTCTCTTTTGCCACCTTAAGAGCTTGTGTATCTCTTGCAGCCATTCTGAGCTGTCTCAGCTCCCTTCTGGCAACCCTTCTTCTCCAAGCACATTGATAAGTCAATGCTGCTCTCTTCAGTTTTAGATAGTTAGAGTTATCTCTGTGGCAACGCCACTGGGTCTGGATATGGGTAGTAGCCTTGTTTTGCTTTCTAAACATGAATTCCTTGAGAGCTGCCATGGTTCTTAACCCTGTCTGCAATGTAATGGCTGACAAACGCAGTTGAGAATAAGTTCTCCATGCAAAATAACAGCGGATATTTTTCTGAATTTTTATTGCTGCTGCTTCTCGTCTCAGGCATTCATGCAGTTTACAAGCCAATCTTGCTCTAACAAAGGATTGCAAGCAAACAGATGCATTACGCAGTATCAGGAACTGCTCACGAGCAACATGAGTACGAAACTGACCCTGAACACCTCTTGCTGCATTATTCCGCACCTCTGTTCTTCTAGCATCTAATTCAGCCATCTGACCAGCTCTCAGGAATACTTTGGTTCTTCCAATCTGGTAACCCTGCAGCCCCATTTTATCCAAAACCTTTTGGCAGGTGACCTTTTCATCATTTTTCTCTTTCACAATTTCAGAAGCAAGAATGCGAAAGCGATGAAGAAAATCATGAAATAATTTCCTTGTGGGATATCCAGCACAGCTGATTCTAATCGCTTCAAGAACACCCGAACATCGAAGTTGCTGCAGAACATTCGTGTTCTCAAATATAGCAGGTTTAAGAACACTATTTGGTTTTACACATCTAATGTAATGAGGCTCTGTAGAGCTCAACGTCTCCATCAGTTCATGAAGTTGCACCTTAAAGCGAGTGGCAATTGAGGACTTTGATGATTTTGTGTTCTCTTCTGATGCCGGGGGGAACAATGCAGACACAAAAGAGCATCTGGAAGCATTCAGTAATTCCTGATGCTCTGCTACCACGTAATCTTTGTTTTTGTCCAGAAAATGATCAGATTGATATATCACATCTCCAGCATAATGTTGGATAGTAAACGCAGTACGAGAAAGTTTTGGTTTGGTAAATCTTTTGTGATTCTTGAACTTTTCGTACAGCTTCTGGGAAAATGTCTCGTGTGTCGACTTTGGGAACATGCAAGCTTCATCAAGAAGTGCAATAATGCCACCTGGTTTGTTGGTTTTATTCGATACTATTGAATTGCATGCACCGACCAGTTCAACCCCAAAGCTTAAGCTGATGAGGAAAGGCAGACAATTCACTTGTACTCCAACACTCCCCTCCCGCAAGCCCCAAGCGTGGAATAGAAGTGGCTGCAATTTTTTATTTGATTGCGTGCCAGCCTGGATTCGAACTCGAGAACTCTAGCTCTGGCACCAACCAGTTCAATCCAAAAGCTTAAGCTGATGAGGAAAGACATACAATTCACTTATACTCCAACAAATACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0034800.1 | 1 | 29655789 | T | C |
| Osa01LNT0034800.1 | 1 | 29654883 | T | C |
| Osa01LNT0034800.1 | 1 | 29667613 | A | G |
| Osa01LNT0034800.1 | 1 | 29653914 | T | C |
| Osa01LNT0034800.1 | 1 | 29654185 | T | C |
| Osa01LNT0034800.1 | 1 | 29654325 | C | G |
| Osa01LNT0034800.1 | 1 | 29655196 | G | A |
| Osa01LNT0034800.1 | 1 | 29655920 | T | A |
| Osa01LNT0034800.1 | 1 | 29656791 | A | G |
| Osa01LNT0034800.1 | 1 | 29657294 | A | C |
| Osa01LNT0034800.1 | 1 | 29657732 | G | A |
| Osa01LNT0034800.1 | 1 | 29657974 | G | A |
| Osa01LNT0034800.1 | 1 | 29661717 | A | G |
| Osa01LNT0034800.1 | 1 | 29661917 | G | A |
| Osa01LNT0034800.1 | 1 | 29662241 | C | T |
| Osa01LNT0034800.1 | 1 | 29662530 | G | C |
| Osa01LNT0034800.1 | 1 | 29658641 | G | A |
| Osa01LNT0034800.1 | 1 | 29658836 | T | C |
| Osa01LNT0034800.1 | 1 | 29658908 | T | C |
| Osa01LNT0034800.1 | 1 | 29659075 | C | T |
| Osa01LNT0034800.1 | 1 | 29659376 | A | G |
| Osa01LNT0034800.1 | 1 | 29660054 | A | G |
| Osa01LNT0034800.1 | 1 | 29660115 | C | T |
| Osa01LNT0034800.1 | 1 | 29660188 | T | C |
| Osa01LNT0034800.1 | 1 | 29660200 | T | A |
| Osa01LNT0034800.1 | 1 | 29660494 | A | G |
| Osa01LNT0034800.1 | 1 | 29661000 | G | A |
| Osa01LNT0034800.1 | 1 | 29661037 | A | G |
| Osa01LNT0034800.1 | 1 | 29661522 | T | C |
| Osa01LNT0034800.1 | 1 | 29662613 | A | G |
| Osa01LNT0034800.1 | 1 | 29663602 | A | G |
| Osa01LNT0034800.1 | 1 | 29664406 | A | G |
| Osa01LNT0034800.1 | 1 | 29664588 | A | G |
| Osa01LNT0034800.1 | 1 | 29665600 | C | T |
| Osa01LNT0034800.1 | 1 | 29666349 | A | G |
| Osa01LNT0034800.1 | 1 | 29666433 | T | C |
| Osa01LNT0034800.1 | 1 | 29667431 | T | C |
| Osa01LNT0034800.1 | 1 | 29668459 | T | A |
| Osa01LNT0034800.1 | 1 | 29660166 | T | C |
| Osa01LNT0034800.1 | 1 | 29656989 | A | G |
| Osa01LNT0034800.1 | 1 | 29664531 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0034800.1 | osa-miR5792 | Cleavage | 3.0 | 18.903 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR5794 | Translation | 4.5 | 19.135 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR5831 | Cleavage | 5.0 | 14.822 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR5512b | Translation | 5.0 | 14.223 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR6255 | Translation | 4.5 | 13.11 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR6255 | Cleavage | 4.0 | 13.751 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR395t | Cleavage | 5.0 | 13.838 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR164e | Translation | 4.5 | 16.921 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR164e | Cleavage | 5.0 | 19.044 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR169i-5p.2 | Cleavage | 4.5 | 21.638 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR172b | Translation | 5.0 | 20.76 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR172d-3p | Translation | 4.0 | 15.664 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815a | Cleavage | 4.0 | 13.37 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815a | Cleavage | 5.0 | 12.086 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815b | Cleavage | 4.0 | 13.37 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815b | Cleavage | 5.0 | 12.086 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815c | Cleavage | 4.0 | 13.37 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR815c | Cleavage | 5.0 | 12.086 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1426 | Cleavage | 4.5 | 19.491 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1428a-3p | Cleavage | 4.5 | 18.567 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR444d.3 | Cleavage | 4.0 | 17.333 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR810b.2 | Cleavage | 5.0 | 17.324 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1435 | Cleavage | 5.0 | 16.518 | 1 | 20 |
| Osa01LNT0034800.1 | osa-miR1435 | Translation | 5.0 | 19.129 | 1 | 20 |
| Osa01LNT0034800.1 | osa-miR1442 | Translation | 5.0 | 16.49 | 1 | 20 |
| Osa01LNT0034800.1 | osa-miR1860-5p | Cleavage | 4.5 | 19.974 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1860-5p | Cleavage | 5.0 | 22.934 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1865-3p | Translation | 4.5 | 24.98 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR1877 | Cleavage | 5.0 | 17.174 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR2099-5p | Translation | 4.5 | 19.838 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR2100-3p | Cleavage | 4.5 | 18.585 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR2105 | Cleavage | 4.0 | 8.235 | 1 | 20 |
| Osa01LNT0034800.1 | osa-miR2923 | Cleavage | 4.5 | 23.325 | 1 | 22 |
| Osa01LNT0034800.1 | osa-miR3979-5p | Cleavage | 3.0 | 18.793 | 1 | 20 |
| Osa01LNT0034800.1 | osa-miR5146 | Translation | 5.0 | 16.034 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR5157a-3p | Cleavage | 5.0 | 15.065 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR5157b-3p | Cleavage | 5.0 | 15.065 | 1 | 24 |
| Osa01LNT0034800.1 | osa-miR5487 | Cleavage | 5.0 | 15.533 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR5492 | Translation | 4.5 | 13.909 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR5506 | Translation | 4.5 | 8.619 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR5512a | Translation | 5.0 | 14.223 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR172a | Translation | 4.0 | 15.664 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR172b | Translation | 3.0 | 15.664 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR1426 | Translation | 5.0 | 15.664 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR172c | Translation | 4.0 | 15.664 | 1 | 21 |
| Osa01LNT0034800.1 | osa-miR2101-5p | Translation | 4.0 | 21.205 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0034800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0034800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0034800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0034800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0034800.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0034800.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0034800.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0034800.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0034800.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)