© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0381100.1
CGACAGAACTCCAGGATAGTTCAGAGATGATAAACAAATAATGAATACAACTTGCATTCGTCGAAACAGACGAGGAGGACACTGACAGGGTGTCATCCTATTGTCGTTCATCGAACAGCACACACACACAGCACACAAACTGAATTTACAATAATGCAGTCAAGCATCAGCAGAACCCTAAAGGAGCATACACACGCCGTCAGCTGTGTTGACTGACTATATAACAGGATTGGATCGGCCTATTTATGTATTGGTCAGAAAGAATCGCTGCGAGAATTGGGGATGATCTTGACGTCAAGAACAGAAGAGAAAACAGCAGCAGCCAGTGGGTAACCGATAGACGACAACAAGATGAGCCGGAGAGTTGGATCATCTGATGAAGGCGTGCCTTCTTGCCCCTCTTTGGTCGACCTGAAGCTGTGGGGACTTCGGCCTCGTCACCTGCTTGGTTGATCTCTGGGGACGAAATGGTCTGTCAAACTTCGGGAGAGGCCGTGCTTGTGGCACCAAGGTCCTCCTGAGCTGCTTCAACGCTTTCTCTTCCTCAATCTTTTGTGCGAATTCATTTTCCTCTCGCAATCTCTTGTAAGTTATTTCCTTTTCCTTCACCATATTGTCAAATTCTGATCTTTGGACCGCCCTTTCATCAACATGTAACTTAAGTGGTTGAACTTCAGTGAGAGGCTTCCTCTCTTTCTCTGGAAGAGGAATGGGATCCTCTTTCATTATGGGGTGTGCCTTCACTACTCTCCTCTGGGCCTCTTCCCTCTCCATCCTCTCTCTTTCTTCCATTATCCTCTGTTGCTCCATCTCATGCCTCACCAAACTCTCTAACTGAAAGCCTTCTGGCCTCGTGCATGGTTTTGGTTCAGGCTTCGGTGGTATCACTGGATAGTCAGTTGTGTAGGGATAAGGATTAGCCTTCGGAATCCTGGCTTTCTCTTCCTGTAATTGCTTTTGCAGCAGTTGTGCAGCTAGCTGCCTCTCTTTCTCATGCCCTCTTTCATCTGTATGTAAATTGAAGGGGTTTGGTATTGTCAATCTGGGCACATCTTTCTTGCTATGATATGAAGATTCTGAGCAAAGAGAGAGCTTATCAAATAGATCCACAACTGCAGGAGGACCCAAGCGATCATCGGTAGAGAAATGGAATTCCTTGGGGGCTGTTGGTTGAGCCTTTAGATGTGGAAACACACCAATATCACCCTTGCTCTCGAGAATCTTTTTGTTCAGTGGCTTTGCCTTGAACTTGGGAGCCTTTTCTAATTCTTCTAGTTCCAATTCCTGAGAACTTTTCACCCTTGGTGGTCTAGCTCGTAATGCTGTCTCAAGTTGGGGTGGTTTTGGCGCTGTCAAGGTCAGTGGCTTACTGCTCTGACTCCTGATAGTCCCCACGGAAGAAGCTTCGGAACAGGTGTCTGCATGTCGTGTAGCTCTCTCCATCGTTTTAAGATGAAACTCATTAAATTCAGGAAGCTGTGGAGCTTTCCTTGGAAGAGGAGGAAATGAAGGGGCCTCCGCAATTTTTTTGTTAAACGGCCGTGCTCTGAACTTCGGAATTTTGGCTAGCATCTCCTCCTCTAGCTCAGCAGAGCTTTTCACTCTGACAGCACGGACCCTGTGGGAGGTCTGGAACTCAGGTTCCTTTGGCCTTGTTAGCATCAGCTTTGTTCTTCTTTGTAATGCGGTTGCTGCATCCTCATGAGAAAGCGATCTGTTGTGAGGGATGGCCAACTCTCTAGTCCCAGACTCGAACTTCTTTACCATCTCTGCTGCCGATATATAGTGAGTCACTTCCTTGAGAGAGTGTGAATCGTCACGGTGCTTCCTCATGGCCGACAGGCTCATCTCGGTGCTTCCTGCTAGACCACCTCCTCTCCCCTTGTGAGGCAGGGTCCTTGTCTTCACGTTCAGTATCTGTCTTGTCCTCCCATCATCAAGCTTCTGTCTCTTGACAGCTTGATTTTCTTGTGCGATTTCATTCGCAGCAGTAGCGGCCTTCCCAGCCAGCAACTCACGAGGGCATTTGATCACACTCCTCTTGACGCTCATCGACTGCTTCAAAGCAGATGGATGTGCCCTTGAGCCAGTCAAGGGTGCAAGACCTCTGGAGGAGTTCGTTGCCTGCACCTTCGGAGTGAAGGCTTCTGTCTTCACTGTCAGCTTGGGACAGGTAGGCACCGTAGTGACAGCTTTGACGGGTGGAGGCCTCTGAATCTTCGGTGTGCTAGAAGCAACATCTGATTTTGCATTGGAAGGGACAAACTCGAAGGATTTTGGCGATTCCTTCTCATCCTCCTCTGCTGGTGGCGACTCCAACATTGCATCACTTTCTTGGTGCTTATGATCGCCGTCAGTGACACAATTTTCACTGGGATTTGCTTCATGGACAAGTTTGATGGAGCCGTCCTTATTCTGTTGCACATTCCCATCAGAATTCTGCGAGGGATTGGCGGCGCTTCCTGCTGCCTCCTCCACTGCTACCTCCTTCGGAATCGGCTCCGCGTCGGTGAAGTCGCAGAGGCTCTCGATCTTGACCTCCGCCCTCGACTCCTTGATCCTCGGAGCGAACGGGGAAGGGGCGTGGCTGGCGGAGGCCTCGAACCAGCGCTCGGCGGCGCGGATTTCCTCCTCCGTCTCGTCGCAGACGAAGTCGAAGAACTTGGGCGCGCAGAACTCGTAGCCCTCGTCCACCAGTAACTGCGGCGGCGGCGCCGCCGCCTCCGGGTTCGCGTCCGTCGCCATCGGTGCTTGGCTGGATAGCGGGCGAGGCTTAGGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTGCGTGGTGATGGCGTCGAGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0381100.1 | 7 | 19255104 | T | C |
| Osa07LNT0381100.1 | 7 | 19255572 | T | C |
| Osa07LNT0381100.1 | 7 | 19255768 | A | G |
| Osa07LNT0381100.1 | 7 | 19256109 | A | C |
| Osa07LNT0381100.1 | 7 | 19256127 | C | T |
| Osa07LNT0381100.1 | 7 | 19257070 | A | C |
| Osa07LNT0381100.1 | 7 | 19257705 | A | G |
| Osa07LNT0381100.1 | 7 | 19257833 | T | C |
| Osa07LNT0381100.1 | 7 | 19257971 | G | A |
| Osa07LNT0381100.1 | 7 | 19253343 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0381100.1 | osa-miR396a-5p | Cleavage | 4.5 | 19.07 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR396b-5p | Cleavage | 4.5 | 19.07 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR396c-5p | Translation | 4.0 | 19.07 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR160f-3p | Cleavage | 3.5 | 17.921 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR171c-5p | Cleavage | 4.0 | 21.12 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR166g-5p | Translation | 4.5 | 9.631 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR172d-5p | Translation | 4.5 | 18.852 | 1 | 20 |
| Osa07LNT0381100.1 | osa-miR1846e | Cleavage | 5.0 | 15.293 | 1 | 20 |
| Osa07LNT0381100.1 | osa-miR2097-5p | Translation | 4.5 | 6.301 | 1 | 22 |
| Osa07LNT0381100.1 | osa-miR5080 | Translation | 5.0 | 23.29 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR5149 | Cleavage | 4.0 | 18.852 | 1 | 22 |
| Osa07LNT0381100.1 | osa-miR5510 | Cleavage | 4.5 | 19.098 | 1 | 21 |
| Osa07LNT0381100.1 | osa-miR5524 | Cleavage | 4.5 | 24.569 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0381100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0381100.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0381100.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0381100.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0381100.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0381100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0381100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)