>Osa07LNT0381300.1

GGCGGTTTATGCTTGCGGGAAGACTTTGTTTGGCGGGATATTTTCACGCCTCTCCACGTAGGCAGCCGGGAACCATCCTGCCACCCCCTTGCATTCTCCTTCGGCCCAACCATTCGGAGCAATCTGACGAACAACGACATAATCACCAACAATTAAACTCAACTCCTTTTCTGTGGTACCATTGAAGTTATGCACCGCCTGCAGCAACAAGAAGGTTCAATGCACATGACATGTAAAATATGGTATAATTGCTTGGTAATGTCAGTTACTCATGTTAACCTCAGCAAGGAAGTACTGGGCCTTCTCAGCACGCTTATGGGAATGAATAGTAGGCGGTGCAGATTCTCTCTTTTGCTTTTCAGAGGACATCTCAGCTTCAACATCATCAAGTATAGCAGCTAACCTCAAATGAAATAACTTTTCTGCTTCTACCATGCCAACCAGGCGCTGAAGAGTTATCCTTTGCTGCTGAGATTCAACAGCGGCAAGTGCAGCAGCAGCTTCCTTTCCTAACACAGCCATGCTTGCTTTGTGC

Explanation	CPC Score
noncoding	-1.08245

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0381300.1	7	19311242	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0381300.1	osa-miR6246	Translation	5.0	24.592	1	23
Osa07LNT0381300.1	osa-miR169b	Cleavage	4.5	24.015	1	21
Osa07LNT0381300.1	osa-miR169c	Cleavage	4.5	24.015	1	21
Osa07LNT0381300.1	osa-miR169e	Cleavage	5.0	24.015	1	21
Osa07LNT0381300.1	osa-miR172a	Translation	4.5	13.204	1	21
Osa07LNT0381300.1	osa-miR172b	Translation	4.5	13.204	1	21
Osa07LNT0381300.1	osa-miR172c	Translation	3.5	13.204	1	21
Osa07LNT0381300.1	osa-miR172d-3p	Translation	4.5	13.204	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0381300.1	7	QRl7	Morphological trait	Culm/leaf	CDO497	CDO385
Osa07LNT0381300.1	7	dth7.1	Physiological trait	Flowering	RM125	RM336
Osa07LNT0381300.1	7	sp2(t)	Morphological trait	Panicle/flower	nan	nan
Osa07LNT0381300.1	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59
Osa07LNT0381300.1	7	qHd-7	Physiological trait	Flowering	RM125	RM432
Osa07LNT0381300.1	7	qLTG-7	Physiological trait	Germination/dormancy	R1440	R1357
Osa07LNT0381300.1	7	qLTG-7	Resistance or Tolerance	Cold tolerance	R1440	R1357

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus