© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0381800.1
AGTAGTAGAATACTCTGCTTGTACATTTGGCATCGCTGAATTGAAATCTTGTGTATCTCGCGCGATTAACAATTACATCGATCGAGTCGGATCGATCTTTTTTCCTTTTTTTTTTCGTGCTATCACAGAAATTACAGACACAATAGCAAGAGAGAAAAAGGAAGTAAAAAAGAATAGAGTAGTATATATAACAGCAGCAACCTCAGCAGCTCAAGCGAGGTGGATGGGATGAAGAAATGAGTTGATTGGATTTAGGCGAGGGCGTCGGCGCCGGCGACGATCTCGAGGATCTCGCCGGTGATCTTGGCCTGGCGCTGGCGGTTGTAGACCATGGAGAGGTTCTTCCGGAGCTCGATGGCGTTGTCGGTGGCGCTGCTCATGGCGCTCATCCTGGCGGCGAGCTCGCTGGCGAGCGACTCCTGGAGCGCGCGGAGGATCTGGCTGTTGAGGTAGAGCGGGAGGAGCGCGTCGAGGATCTGGACGGGGTCCTGCTCGAACTGCACCACGGGTGAGAAGGGCTGCGTCTCGATCTTCACCTTCTCCCGCTCCACGGTCAGCTTCCCTTCCTTGGTGGTGAGCCGGAACAGCTCGTCCTCGGTGGCGTCCACGCACACGCCGTTGATGTCGCAGATCTCCCCCTTGGGCGACATGGGGAGCAGCGTCTGGATGATGGGGTCGGAGCGGACGAGGGAGACGAACTTGGAGTAGAGGAGCTCCACCTTGTCCACCGCCTCGGACACGAACAGCGAGTAGACGAGGTCGCAGATGGACTGGGAGTCCTTCACGGTGGGGATGCCGTTCACCTCCAGCGTCCGCTCGGTGGGGATGAAGGGGCGGCGGATGAAGTAGGCGTTGCCCTTCTTGCCGACGCTGACGACGGTGTACTCGAGGCCGAGCTGCTTGAGCTCCTCGATGCGGGTCTCGGCCTTCTTGAGGACGTTGTTGTTGAAGCTGCCGCAGAGGCCGCGCTCGCCGGTGAGGACGACGAGGGCGACCTTCTTGACGGGGCGGATGCGGGTGAGGGGGAGGTCGATGTCCTCCGTCTGGATCTCCTGGTTCATGTTGTAGAGCACCTCCACCAGCGCCTCCGAGAAGGGGCGGGAGGACACCACCGCCTCCTGCGCCCGCCGCACCTTGGCCGCCGCCACCAGCTTCATCGCCTCCGTGATCTTCTGCGTGTTGCGCACCGAGTCGATGCGGCTCCGCAGCTCACGCAGCGAGCACCGCACCACCTGCAGGCGGCCGCTGCTGCCGCAGCTAGGAGCGGAGCGGCGGCGGGTGGCCAGGGCGGAGGAGGACCAGGCGGTGGAGAGGTGCGAGCACGACATGGCTGGCGGGTCACCGGCAACAGCGGCGGCGGCGGCGGCGGCGAGTGGAGGGAAAGATTTCGGATTGGGTTTGGGTGGAGGTGAGGCGAGGCGAGGCGAGGGGCCGAGGCTCTCCAGGCGGAAGTAGGGCAGGTGGGGTTTTCAAGGCGGGGTGAGTGGTGGAGGAGGCAGTGGTCGGATCATGTGGATGGATGTGCTGCTGCTTCTGCTGCTTCCATTTCACTCGAATCATTTTTTGGCTTGGCCCATCTGAAACTGAAAGAAATACTAGCATATTGGAAAAATGAAAAATAAAAGGAAAAGAGATACTAGTAACTCACACTGGCTGGGACTCAGGATCGTGCTGAGGATATCCTGGCATCCTGCAGTAGATATCAGATACTACCCAAAAAAATAAAAATTAACACAAGCTTTAGACATGATGGTTAGGTTAGCCAAGTTTAGTTCCCAACTTTTTCTTTAAACTTCTAACTTTTCCATCACATCAAAACTTTTCTACACACGTAAACTTCCAACTTTTTTATTCAAACTTCCAATTTTAGCGTGGAACTAAACACAGCCTTAGTACTTGTGCTTGTTGCTTTCAATTTTAGCAAGGAAATGATTTTATTTATTTTACCAGTTTTGCTGTAATTCTTCTGCATATATAGAATTGGTGAGCACAAAACTTCATGGCAGAGGGAACAAACAGATGTAACCCAGTTCTTTCCAGATGTAGAAACAAGGTAGTACATGAATATAGAAGGGCACAGTACAGGTACAAGGTTCAGGTTTAATGAAATGGAAGTAACTTCGAATGTAAACTAGAACCTCAGGGTACAACAGCAGCAGCAGCTAAAGTCTCGGATTGATCTGCAGCAGGAGGTTTCTTTGATGGCTTGTAGACACTGAAATCGCCAAAATCCCGCCGTCCACTGTGCTTTATATTCCAGCCCGAAGGCAAATAACGAGGGTGAAGAGAAGCTACGAAGACCTGCCTCCACCGTTGGCTGAACTGGTTAATGGCCTCCTCGCCACCGTTGGAAAGCAAAAGCTCCACGACCTGTTTACCGTGATGCCCATGACCTAACAGGGAGATCTTCTTGTCACCGTTTTGGGGAATGGCTTGGTTAGAATTGTTACTGCCGCATGGATCCCTGTCAAGATCACCGTTTGCAGGATTACCACCTAAGCTTGCTTGCTGCACGGTGTCTGCCTCAATGCTAGAGTCAGAAATGGGATTAGCCATACGGGGTGGATAGATTGTGCTTTCTTTGCTCAGAGTTGGACCATGTATCTTATTACCCCCAGAGCCTGGCTGACTGGTATGTTCATCAATACCTAGCTGATTGTTATTCTCATCAATGTCTGGATGACTGTTATTCTCAACTCCATTTTTAGAAAATTGCTCAGCATATCCATTTTCTGGATCATGTTCATTATTCTCAACAATGCCGTTGCTGTTGCTTTTTCTAATAACATTTTGAGCCTGGGATCGGTAAGAAAAACCATTTTTCTTTGAATGTCGCCTTCGCTCATTGGGACTCATGCCAACAAGTAATGCCATCTCAAGATCTTCAGGAGTCACATCCCTACCACCATAGTATGACTTCACAATCTGCATTAGCTCTTCATATCTCTTCAAAGGCATATTGGATCCATGTCTTAAAAGGGCCATTGCAGCAGTCCTCAGCTGCAAAGGAGACACACCTGTTCCATTTGATTTATCTTCAGATAATGATGCACCAGCTATTAAACTTATATCACCTGAGTTTAATATCTTCTGTACAAAAAGCGGCACCCCAAATTCTTTGGCTATTTGCCTCTTGTACTTCTCAGCTGCTGAATGAGCAATTTCATGGCAGTCTACGCAAAGAAGTACAATATCATGTGAACGATGGCTCTTCAGATGCTCTGGAAAATGCATCCTGTAGCACGATGGTATAATTCTATATCTGATATAGTGGCTCTTTTCTCCACATCCGACACAAATATTTTTCTTGCTCTGAATATAGAAGTCATTATCCTCATCCTCTGGGCGACCCTTAGGTTCAAACAAGAGCACAATTGCTGGAGGATTATCTTCTATTAATTTTGCTAAATTACGTTGAATATACCATTCCAACTTTTTACGGTCACAGTAGCAAAGCAGTCTTCCATCACTGGCGTAGATCCTGCAATTGTGATATACTGGGGACTTGCATGAAAACTTTTTAATGAATAATTCCCGGGAAGCCTTTTTGTTAGTTGGTGCCATCAACAACTTCTCCCCACTTGATGCAAAGGAGAACATATTTTTTTGCTTCAAACTCAGCTGTGATACAAGGTTATAATTAAAAACTGATAGTCGACATAATCTACTTGGATCTTTGTACTTCTCAAGCAAATTTTTAAAGATGGCATCCATGCTGACAGTGATGTCCTCAATCAGATAGCGAAGTTCTTCAGCGTGAGCAACAACAATAGGTGAAGGTGGCGGCAAGGAAGGATACACAGTTGAATTGCTTGTTTCAGTTTCTAATATGGCAGAACACACCTCAGTTGGACCTCTTGGAACACTAACAGCAAGGGAAGCTATAGCTTGGTCTGACAGGACATACCGTAAGCTCTCATCATGCATGCGAGCCATTAAATCCCTCCATGCACAAATTTTCCAAACAAGATCCTTCACTTCACTTGATTTATAGGAGTCAAGTCCATGGCTTTGCAAATTTTTTGACAAAATAGACGCCGCAGAGGATGCTCCTGGTGGACATTCAATTTCCTTTGCATACAGTTGCATACACACCATATTTGAGCGATGGCGTAAGTTTTTGCATGAAGCTCTGATGCCAAACAATTTGCAATGTACAACAGATAATGCGCATCACAACGGGCATACTGAATCATTTCTGGTGTTAGTGGGCGTAATCTCCAATCCTCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0381800.1 | 7 | 19657871 | C | T |
| Osa07LNT0381800.1 | 7 | 19657879 | A | T |
| Osa07LNT0381800.1 | 7 | 19657981 | A | G |
| Osa07LNT0381800.1 | 7 | 19657739 | A | G |
| Osa07LNT0381800.1 | 7 | 19658006 | G | A |
| Osa07LNT0381800.1 | 7 | 19658769 | T | G |
| Osa07LNT0381800.1 | 7 | 19658810 | C | A |
| Osa07LNT0381800.1 | 7 | 19658935 | A | G |
| Osa07LNT0381800.1 | 7 | 19659193 | G | A |
| Osa07LNT0381800.1 | 7 | 19659378 | A | T |
| Osa07LNT0381800.1 | 7 | 19659830 | C | T |
| Osa07LNT0381800.1 | 7 | 19660870 | A | G |
| Osa07LNT0381800.1 | 7 | 19660960 | A | T |
| Osa07LNT0381800.1 | 7 | 19661986 | C | G |
| Osa07LNT0381800.1 | 7 | 19662063 | C | T |
| Osa07LNT0381800.1 | 7 | 19662426 | T | C |
| Osa07LNT0381800.1 | 7 | 19662503 | T | C |
| Osa07LNT0381800.1 | 7 | 19662519 | T | C |
| Osa07LNT0381800.1 | 7 | 19662585 | G | A |
| Osa07LNT0381800.1 | 7 | 19662683 | A | G |
| Osa07LNT0381800.1 | 7 | 19656502 | T | C |
| Osa07LNT0381800.1 | 7 | 19657791 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0381800.1 | osa-miR5807 | Cleavage | 5.0 | 15.33 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR5817 | Translation | 5.0 | 18.402 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR5823 | Cleavage | 4.0 | 17.066 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR167e-3p | Cleavage | 5.0 | 19.227 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR167h-3p | Cleavage | 4.5 | 19.227 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR167i-3p | Cleavage | 5.0 | 19.227 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR169i-5p.2 | Translation | 4.5 | 12.131 | 1 | 22 |
| Osa07LNT0381800.1 | osa-miR171g | Cleavage | 4.5 | 9.66 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR1850.1 | Cleavage | 4.5 | 16.582 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR1850.1 | Cleavage | 5.0 | 5.972 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR1852 | Cleavage | 4.5 | 12.216 | 1 | 21 |
| Osa07LNT0381800.1 | osa-miR1861d | Cleavage | 4.5 | 21.329 | 1 | 22 |
| Osa07LNT0381800.1 | osa-miR1869 | Cleavage | 4.5 | 14.613 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR1869 | Translation | 5.0 | 15.089 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR2873a | Translation | 3.5 | 23.474 | 1 | 24 |
| Osa07LNT0381800.1 | osa-miR5524 | Translation | 4.0 | 12.8 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0381800.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0381800.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0381800.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0381800.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0381800.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0381800.1 | 7 | qNFGP-7-1 | Physiological trait | Source activity | RZ471 | RZ753 |
| Osa07LNT0381800.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0381800.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0381800.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0381800.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)