© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0382100.1
GGTTCAAAGAGCAAAACATTTGTGTATATAATAAATGGAAATTACAATACCCTCAACGGTAAGTACATAATATAGTAACACCATGTTTTCCATCAAAATTCTCGACGTACGACTAGAATGACAGAATCTGGTACATTTCCAGATCCTATGCATATATCAACTCCCGGGGAACTAGACTAGCACTGATCAAAATTTCACTCTCCGGTTGCAGAGAGCTGCCTACATTAACATCACGCGGTACAAAACCATTAAATTAACTGTGCATTTTACTCAAAAGCTTCAGGGCCAACGCCTCCTGTTGAGCGAGAACATCCCCATCCTTCGCCGCATCTTTGCTGCCTTCTTCGTCATCGCTGTTGAAGTACCTCTTCTTACCCTTGGAGGCAGTCCTCTGGTCTCTGTCCGACTCCGAGCCACTGTTCTCTGACCCTGCGTCCATTTCCTCATTCCTCTTGCGCTTGAGCTTCAGCTTCTTCTGTAGCTTCTTCTCGCGCAAGATCCTCTTGTGTTCGAGCTTGTCCTCCTTGTCATGCTCCTGCATCTCTCTCAACATCTCTGCGTACCTCTGGGAAATTTTATCCTTGTCAATTACATCTCCTGAGCCCACTTCTTCAGCTATGGATGCAAAAGGAGGGATAGTGTGGCCTTCATCGTCAAATTTGACCCTTGTGCCCAATGGCCTATGCACGTTTATCTTCAGCTTCTTCTTTTTCACGGACTTATTTCCCAACTGTGTGACTTTCTCTGGTTCATTATTTGTATCTGCAGTGGACACCTTGGGATAAAGGACATCATCAAGACCATCAGCCATATTTACATCTGTTTGCTGCTCCTTGGGATAAAGGATATCATAATCTCCATCATCCTCAATTAAGTTACTTTTGGCCTGTGGATTAATTTCTATAACTTCAGGTTTGGAACTTCTTTTCATCCGTTTCACATCAATATCCCCCATATATTTCTTTGGCACATTCTTTTTGTGGCTAACAAAACGAATCTTTGGGGTAACAGGAAGACCAAGAGAAGCAGCATATGCGGCAAAATTCTCCATAGAGAACCTGCTCAGATCAAACACCTCTTTGTCGCTCTGGAGGTACACTGACTTCAGATAGGTGACAAAAGCCCTTTTACCCAGTTGCTGCAAATTGGGATATTGCACCAGCACTGACGCTATATTCTGAGATATCTGCTGCAGTTGTTCTGTGTTTGGCTTTTTAATATGTATAGGTATTTTACTTTCAGCTGCCTTCAATTTTTCAAGCATTTTCTCTTCCTCTGGACAAAGGAAGATAAGAGCTTTTCCTCTCTTGTTATAACGAGCTGTACGGCCAACTCTGTGGATGTACAGAGCAATGTTTTCTGGGCAATCAACTTGTACGACCCAATCAACATCCTCTATATCCAATCCTCTAGCAAATATATCAGTTGAGAATAGAACCGAGTGTCCCTCTTTGAACTCTGCTACTATGGCCTGCTGTACTTCGTATTTCATCCGTCCATGCATGCATCTCAAAGAAATACCAGGACGGAGCTTCTTGAAAACTTCATACACAAATTTTACCTGCTTGACACTGGATAAGAATACTAGTATTCTTGACTTTAGATGACGTTTGATGAAACTCCAGAGCATATTTAGCTTCTGTTCAAGAGGCACAATCATGGCATACTGCTCAAGGGTATCAGGAGTAGCTGTTGTAGCCTCCTCATGCACACTTATATATTCAGGATCCTTCAGGCTAACCCTTGCAAGGTCCTTAACTGATTTTGTTTGTGTGGCAGAGAACAGCAATGTTTGTCTAACTTTGGGAAGCTGAGAAACAACATTGTCAACTTGCTCTTGGAAATTTTTATCAAGAACTTGATCTGCCTCATCAATCACCAAAATCTGGATCTGTGAGCAATCAAAGTTTGTGGTCTCGCCCATGTGTTGAAGTAACCGCCCAGGCGTGCATACTAAGATATTCATGTTGTTTATGACTGCCTTCTCTTCATCAAGACCTTTGCGATTACCAACAATACAAGCAGCACTGAAGCCATGAAGCTTCCCTACCTTCTGGAAAACATTAAAAATTTGCCCAGCTAAATCCTTATTGGGAGAAAGAACAATGCAACCCACACCATCCTCGGGACCCCATCTCTCTCTGTACAGCTTCTCTAAAGCCGGGATGACGAAGGCAAGGGTCTTGCCGGAGCCGGTCTTGGCGGCGCCGAGCACGTCGCGGCCGCAGAGCGCGTGGGGCAGCGCGGCGCGCTGGATCTCGCTCATCTCCGTGTACCCGGCCTTCCGCAGCCCGTCCTTGGTCTTATTCGACAGCGGCAGCTCGTCGAACCGCGCGCAGGCGCCGTACTCCGGGTGCTCGCCGGCCGCCTTGCTGGGGACCCCTCCGGCCCCCTTGGCTCCCCGCTTGGCGGCGGCGGTGTCGGCGGGCGAGGAGGAGGACTTGGAGAGGGGAGGCGGCCTGGTGCCCCGGGCGGGCTTGCCGGCGTCGATCCAGGCCTCGAGTAACCGGATCTCGTCGGCCTCCCGGAGGCGCGTCTGCTTCGCCGCGCCGCGGCTCCGCGGGCGGCGCATGGCTCCGGGTGGGTGGCGGCGGCGGCGGCGGTGGTGCTAGGGTTTAAGGTTGCTTTTGGCGGCGGAGGGATTTTCTGGTGGCTCTGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0382100.1 | 7 | 19927409 | A | G |
| Osa07LNT0382100.1 | 7 | 19926219 | C | T |
| Osa07LNT0382100.1 | 7 | 19926877 | A | G |
| Osa07LNT0382100.1 | 7 | 19927161 | C | G |
| Osa07LNT0382100.1 | 7 | 19927565 | G | A |
| Osa07LNT0382100.1 | 7 | 19927619 | T | G |
| Osa07LNT0382100.1 | 7 | 19928074 | T | C |
| Osa07LNT0382100.1 | 7 | 19928365 | A | G |
| Osa07LNT0382100.1 | 7 | 19928476 | C | T |
| Osa07LNT0382100.1 | 7 | 19929082 | A | G |
| Osa07LNT0382100.1 | 7 | 19929251 | A | G |
| Osa07LNT0382100.1 | 7 | 19929447 | A | G |
| Osa07LNT0382100.1 | 7 | 19929771 | T | C |
| Osa07LNT0382100.1 | 7 | 19930106 | A | T |
| Osa07LNT0382100.1 | 7 | 19931210 | G | A |
| Osa07LNT0382100.1 | 7 | 19931798 | G | T |
| Osa07LNT0382100.1 | 7 | 19930382 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0382100.1 | osa-miR5831 | Translation | 4.5 | 16.182 | 1 | 24 |
| Osa07LNT0382100.1 | osa-miR5834 | Cleavage | 4.0 | 11.122 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR5834 | Cleavage | 4.5 | 13.988 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR6252 | Translation | 3.5 | 19.741 | 1 | 23 |
| Osa07LNT0382100.1 | osa-miR6253 | Translation | 4.5 | 12.691 | 1 | 22 |
| Osa07LNT0382100.1 | osa-miR6255 | Cleavage | 4.0 | 12.668 | 1 | 22 |
| Osa07LNT0382100.1 | osa-miR395u | Cleavage | 4.0 | 12.121 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR408-5p | Translation | 4.5 | 14.319 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR815a | Cleavage | 3.0 | 13.741 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR815b | Cleavage | 3.0 | 13.741 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR815c | Cleavage | 3.0 | 13.741 | 1 | 21 |
| Osa07LNT0382100.1 | osa-miR2095-3p | Cleavage | 4.0 | 11.297 | 1 | 20 |
| Osa07LNT0382100.1 | osa-miR3979-3p | Cleavage | 4.5 | 17.985 | 1 | 20 |
| Osa07LNT0382100.1 | osa-miR5081 | Cleavage | 4.0 | 21.769 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0382100.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0382100.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0382100.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0382100.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0382100.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0382100.1 | 7 | qNFGP-7-1 | Physiological trait | Source activity | RZ471 | RZ753 |
| Osa07LNT0382100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0382100.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0382100.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0382100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)