© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0382200.1
GTAAAAATTGAGATCCTCCAAATTATAAATAGGAAAGCCAACACAGGTTATGAGGTAAACAATATCAACATCATATTTCCCCGTACAACACCAATCCATGTCAACACAGTTCCACTCAAAGGTTCTGTCAAACCTAATACTTATAGCCCTAATAGCAAGATATATAGAGAAAAAATAGGCAGAAATGAACAAATGAAATTAACTCATGTCAACAACCGATGGCCCTAACTGATAAGCTGCTGCAGATCAATCCGCCATGATGAAGCTAGCTGCTTCATTATCTGAACCGGCGTCGCCCCCTCCCAATCATCAGGCAACTCAATGGCAGTAGCTTCGTGTAATCCCAGTAAGAGGTCGTTCTTCGCATCTAGGGGGATTCCAAGATAACCGGATCCGTTGTCCATTACCAGATCAGTCAACTGCTGTCCAGACAGAACCTTAATTATTATTGGTATTGTTGAGCAAACAAAGAACATAAACAACTATCCAACAAACAGAAGGCCATTTGATCATTGAAGATAGCATCAAATATCCTTCACATACTTCACAATCATTTTTTCTTCAACCTTGTAGCAATCCAGTAAAAGTGAGAGGCCTTCATTCTAGACCAAATGAAAAGCCAGGATTCTGTTTGAGAGGGCAAAGGACCAAGCGTAAATCAGTCAAAATTCTAGTCTCCATCCAAATGGACTTTTTTACCAAGACATCTTAAGAGTGCTTCAGTTACTTCAATTGGATAAGCATATAGCTAATGAAAAATTAATTTATTGTGGTTGCCATTCCTTGTTTCTCCATTCTTGTTACTAAAGAAAATAGCATTCTTTAATAACTCAAAACCTTTCAAAGCTCTTTTTTGTTTGCTGAATTATAAGGGACGAAACCAAATTGAACTCACAAATCAAGAGTGGAGCCAAATGATAATGCAAGGAATGTGTAAAACTATAGACACAAACACTGTCTGAAAACTGGCGAGTATACTAAGCAGAAATTGGAAATTGAAGAAACACCCGGTATCAGTATCAGATGTTTTCAGCCTTACAAAACTTCCGATCACCATCACATGCTACAGATAATCCTATTTGCAAATGCAATGCTAATCATATGTATCATGAATGGCTGGCTTTGAACCAGGAAGGGGAACCAGAGCAGTAGTGCTAAAATAGCATGCAACTGTCAAAATATGTTTAAATCCATTCCTAAGCAATTTAGAGCATTCTACTCTTTTAACACAGAATGTCATTTTTATTATATCAACACCAGTTTTAGTCTGAACACAGGTTAACATTTTCCATGATATTGTTGTCAGAGTAAACACCTGTCTCTTCAGAACTTTTATATTCCTACAATGGAACATACTACTTTACCTGCTGAAGCCAGCTCAAAGCTATATCATAGAAGCTTTCTTCCACAAGAAATTGTCCAACAGCATGTAGGACTTCGTTTGCAACTTCATTTGAAAGTTGATCAACTACTGGTCCAGTTTGCTCCATTAATTTTACAAGTAATTCAGCATCCCCAGTTGAAAGAACCTCAGCATAAGCCGAATCCATATCACCAACATGTATCGCATCCATTGCACGAGTCCAAGACTCCCAAATTGGTCCTCTTTCATCCCCTTGATTATCATCATTCAAAGTTTCCCCATCCAATTCACGGATAGCAACTCTCGCAGCTGCCCTAGAAGTTCCATTATCTTCACCAGCAACCCTAATAGCTTCCAGTGTCGCTTCATCTTTGGAGGCTCGCCATGCACTTCGAGCAGAAGGACCCTCCCCAAACCTAAATGGACCCTGTCCTTTGTCCCATCCTCGCCTAGGTCCTGCTTGATCATTGCTTCGTTCATTTCTAGGCACCCTGTTATCAGATGAAACAGAGTCCAACCCTCTCCTGGCATTCATACCACTTCTTGATCCAGAATAAGCATACGAGTCCCATGGTTCAGAGCTTCTTACACCAGAAGACATACCATCTCCAGAAAAGTACCTTTCTGCAAATCCCACCCGTCCATCACGATCCCTCCCAAATTTTGAATTAGAATATTCATGAAAACCATTGTATTTCATAGATGATCTACCAGGAGATGAATCAAAGCCCAGCATGGGGCCACCACCTCTCCTGCCTGATGATAGTGATATATCCCTGGCCATTTCCTCAACAACTCTCTCAAGACCACGCACTCGGTTCTCTAAAGTAACCATACTGTCATGAGATCCTCCCATGAAATCCTGCAGCATGTTCATTAGACTAGTCTGCTGTCTATCCAAGTGGGACAACTGCCTCTGTATCGCCAACCAGTTTGTTTTATTATTTAAGGAAGGCCCTTCTCCAGGAACATTCATTGCTGCTGAAGCAGAATCTTTTGCACTAGATTCATTCCTATCTTCAACATCAGATGCCCTAACCTTTGCATCTTTGTTTCTACTTCCTCTCTGGCCAGCCCATCTATCTCGAATATTTTGAAAATTAGAGCTAGAACGCAGTTGAGTCAAATTTGCTTCATCATCTGCTGATCCATTGCTGTTAGCTGGACCAACAGGATCGCCATCTGCATCTTCTGGTTCCTCTTCACTTTGTAAATGAGATTGTAAAGTTTTGCGGGGTACAACCACCTCAACAGCTAATTCATCTGTGATTCTTGTCTCGAGCTTTTGAAAAAATTCAGGGTTCAATTCCCTATCGGTTAATGTAGGTCTTTTCTTTAAGAGAACTGCTGCTTTTTCAGCCATGCTACTGCCCTTCACTTTGTCATTGTTATTAGGTGAATCCATTTTCCCTTCATTATCAGCTGATTCCTTATTTTTACCATCGTTCGAATCATCTCCTGCCATTTTTTTCCATAGCTGCACTGCATCAGCCATGCTATCTCTGACAGGTTTTACCTTATCGAAGCGACAAGCTTCAAGAGCAGCTATTGTTGGAGCTGTTCCATCACCTATCAATCGGCCTGAATATGTGGCCAGGACACACAATGTATCAGCTGCAGCTTTTCTAGTAGCCCAATCACTGTTCTCGAGACAGTCACGAATGCTTTGCAATGTTTGAGGCATATTCTGAGGACTGATTGCTCCAACCTGAGACAAGCTCCCGATGATGGTGAGAAGTGCCCCTTTAGCCTGTACTCCCTGTCCACCAAGCAATTTGCAAACCCTCGGACCAATCTTCCCAAACATCCCTACCACGCCAGGTCCAGGCCCCGCGCCCTCCACCGTCTTTGCCAGGCAGGCCGCCGCCCCACCCTGCACTGCCTTGCTCTGCTCCCCCATCGCCTCAAACAGTGGCTTCACGAACAGTGTGACAGTCGCATTGCCCGCTTCAGCGGCAGCCGAGGCCGCCAGGGGTCGGAGGTACACCTCCGAGAGCTGGCCGGCGGCATCGCGGCACGCGTCGCGCACGGAGGAGTCCGAGTTGGTGTCCTTGAGCCTCCGCGCGAGGTGCGCCATCACCTTCTGCAGGTAGGGCGCGGCGGCGTCGGGGTGCGCCGCGCAGAGCGTGGCGAGGAGGCGCAGCGACTCCCGCCGCGCGGGGGACGCGAGGCCCGGCGAGTCCGACGCCAGCGCGTGCACCAGCATGGGCACGGCGTCGGGCGACGGCAGCGAGCGGATGATGCGGTCGAGGTCCTCGACGGCGATGTGGTGCGTGTCCCTGTCGGAGAGCTTCGCGAGCGCCCCGAGCACCCTCGACTTGAGCTCCGCCATCGCCGCGTTCTTCGACGGCGTCGCCCCCGCGGGCCCCATACCCACTCCACCGCCCCCGCCCCCCGCCGCCGCCCCCGCCGCGGAGCCGTTGTTCGGCGGCTGCGCGGTGGTGGGCGACCTGGGGTGCGGCTTAGCCGCCGACTTCGACACCGCCGTCGCCATCCCCGTCGGATCCGCGCCAACGGCGAGCTCAGATTTGAATTCCGCCGCCTCGAGCTCGACGCATCCAGCGGCTGATTCGGGGCGAACGAATTCGAGCGCGGGATTGGCTCCTCCCTCGGATCGATCGGAGGGTTTGGGGGGTGGGGGTTTTGGGGCGGATTGGGGAATGGCGGCGGCGGCGAGATCTCGCCTCGGGAGCGGAGGAGGTGGAGGTGGGGGAGAAAGGCGAGGAGGGCGGAGGCGAGAGAGAGAGAGAGGGCGAAAGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0382200.1 | 7 | 20087617 | C | T |
| Osa07LNT0382200.1 | 7 | 20090103 | C | T |
| Osa07LNT0382200.1 | 7 | 20090144 | T | C |
| Osa07LNT0382200.1 | 7 | 20090273 | G | C |
| Osa07LNT0382200.1 | 7 | 20090280 | G | A |
| Osa07LNT0382200.1 | 7 | 20090366 | A | G |
| Osa07LNT0382200.1 | 7 | 20091122 | G | A |
| Osa07LNT0382200.1 | 7 | 20091273 | T | A |
| Osa07LNT0382200.1 | 7 | 20092430 | T | C |
| Osa07LNT0382200.1 | 7 | 20092598 | C | G |
| Osa07LNT0382200.1 | 7 | 20092664 | A | G |
| Osa07LNT0382200.1 | 7 | 20092703 | A | G |
| Osa07LNT0382200.1 | 7 | 20093341 | T | G |
| Osa07LNT0382200.1 | 7 | 20088016 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0382200.1 | osa-miR5821 | Cleavage | 5.0 | 16.486 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR5825 | Cleavage | 4.0 | 10.667 | 1 | 24 |
| Osa07LNT0382200.1 | osa-miR171a | Translation | 4.5 | 23.431 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395b | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395b | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395d | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395d | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395e | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395e | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395g | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395g | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395h | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395h | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395i | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395i | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395j | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395j | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395k | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395k | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395l | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395l | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395s | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395s | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395t | Translation | 3.5 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395c | Translation | 4.0 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395c | Translation | 5.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395a | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395f | Translation | 2.5 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395f | Cleavage | 4.5 | 13.614 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR167d-3p | Cleavage | 5.0 | 15.538 | 1 | 22 |
| Osa07LNT0382200.1 | osa-miR395m | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395m | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395n | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395n | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395p | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395p | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395q | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395q | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395w | Translation | 3.5 | 10.665 | 1 | 22 |
| Osa07LNT0382200.1 | osa-miR395r | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395r | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR1853-3p | Cleavage | 3.5 | 9.363 | 1 | 22 |
| Osa07LNT0382200.1 | osa-miR1866-3p | Translation | 5.0 | 12.004 | 1 | 22 |
| Osa07LNT0382200.1 | osa-miR2863a | Translation | 4.5 | 10.965 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395y | Translation | 4.0 | 8.156 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR395y | Translation | 4.5 | 10.665 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR5340 | Cleavage | 4.5 | 11.261 | 1 | 23 |
| Osa07LNT0382200.1 | osa-miR5499 | Cleavage | 4.0 | 9.679 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR5508 | Cleavage | 5.0 | 15.627 | 1 | 21 |
| Osa07LNT0382200.1 | osa-miR2275d | Cleavage | 4.5 | 7.092 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0382200.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0382200.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0382200.1 | 7 | qNFGP-7-1 | Physiological trait | Source activity | RZ471 | RZ753 |
| Osa07LNT0382200.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0382200.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0382200.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0382200.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0382200.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0382200.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0382200.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)