© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0382300.1
CACGCCCTCGCGGAACAGCTTGTCATACAGGAGGCAGATGAACTGAGCCATGTACTCCTCATCATCGAAATCTTTGCTGCGATCGCCATTTTTCTCCATGTCGCTGTCTTCCCAGTCACTCGTAGGGCTAACAGGTTCCGCCTCAGACTCGGAAGCCTCATCATCGGCAATGACAAACTTCCCGTTCTCAAGGCTGCCATTTACTTCCATCCCATGGTATACTATAGACTGGGAATCTGGAGGCTCCATGGCCGACGAGATGACTGCTTTGGCACCAGAATCCATGAATGCTTTGACCAGGCCGTGAGCAAGGCCATACTTACCACTGCATACAATGATCCTCTCCCTCCATGCTCCAACCATCCATCGAACATCTTCAGGTGTCATATGAGCAGCAGGCACTGTCCTCCTGAACATATAGGCACCAATTTCTTGATTATCTTCCATTACTTGTGTTTGGCGCCCTATATAGCGGTGGTGAATCCCACCAATTTCAAACGACGGCCACTCTGCAACCAACTCAGACAAACATGAAATCTTTGACAAGGAATATGCACCCTTTCTCTTACATCCATGCAACATGGCTGACAAGCTAGTTTTCACACACTGGAGAAACCTGTCTGCAAGTTCCCCTGGTTCCGCAACTACAAACACATCATTCTGCCAGCTCAATATTGAGCCAGTTGAATCGTTTTGAAGTGCCATATGTATCACACCAACTTGAGGCATATTTTGCAACTTATCATATAGTGATTGAACATGTACAGATGGCTGCCATGACTTAAGAGGTGACGTTGGCGGCGAGGACTTTGCAGTTGGGTTGCCATCCAGGCTAAGCGGCGGAACCAGGTCAATTCGGCCAATTCTTTGGGTGCCCTCTGGACTATATAGAAGTGGACTAGATGGAAAACTGCCAGTAAATAAGGGAGAAGTAATTGGAGTCGGAAGTGTGGTAGCTGCCTTTCCAAACCCAGAAGCACTGTTCATTAGAGTAAGCCTGATACCATTCTGGGAGCAGAATGTTTCAAGCGAGCGGGCATGATTTACTTTCTTCCCAAAATCAGGACTATATGAAGCCTCTACAAGTAAAACCACACGCCTCCATCCTAAGGTAGGATTACTTTCACTAAAACCTGAATTTGATGGCTTGAATCTTGAAAACAACATTGATTTGGTAGTTTCAGATGACTTTTCTTCCTCTTGGTATCTTGGAACTAAAAGCTCACAAACATTCTTGAAATCTTGAAAGTTTTTCTGAATGTACTCATCAGTTGCAGCTTCCAACTTAAGCCAGACAGCAGGATCAGTCTCATCTAGTTCCATACCACACCGCTCATCAACTGGATTAAAGCGGAAATACTGCATTTCTGGGAGCATTGGTATCAGTGTATCCAAAGTTTCTTCAACTCTCTCTACAGAGCATGAACTTTCTATTAAAACTTGCCCTGTGTCCAAGTAGCGCCACCCACCTCTCCGACTCTTAGTTGGAACTGAACCACACCCTATTGAAACTAGACAATCTATTCTCGTATCAGGCCACAAAAGTTGTGCCTCTCTTATCGCAAAGATTGTGGGATTGTTGGCTACAATAGCTCCATCCTGCCAACGATTTACGTCATCAGAGAAATCATCCAGATAATATGGAGCTGCAGAAGATGCTCTTATGGCTTCCCATATGCGATGCTTGCAGCTACCCATGAAAGCACCACGTTTAATACCAACCGGTGCACCAGAAACAGCAGTTCCAACCGTGTTAATTGGTTTAATACCGACCGGGGCACCAGAAACGGGCGTTCCAGCTGAGCCAATTGATGGGCTTTCTGTCATGACTGATGATACTTCCACAGTGCCAGGTGGGTACTGGTAATTTCGGAATATATATGGTTGGGCAGGCATGACACTGACTAAAGTAGATACAGCAAAAACCTTCGGAATGCCTTTTACAGCAGACTCTATAAGGAGGTCACCATCTTCATCAGCACACATTTCCTTTAGTAACCTCTCAAATTGATCTGCACTGTGCTTTGATCCATGTACAACCACCCTAAAACTCTGTGATGAACTTTTAAAAAGCTGATCAATCTTCTCCTTCCACGTTGCAGCTTCATCCTTGGGGGCAGGTTCAGCAAAGACAAGTTTGCCAAGTTTTGTGTATATTTCTTCACATTGATCCAGAGTCATCTGCTTGACTCCAAGAGCCATCGCAAGCATGCCACCTGTCGATGTACCACATATGAGGTCAAACATTTCATGTATGCGTTTCCCAGTCCCTTGCTCTATCTGTTTAAGAATTTGGACAGTCGCAAGGCCTTTCATGCCACCACCATCCATTGATAGAATGCGCAGACCCTTCTTTGCAACTGGTCTTCCTCTTATTGCTCGACGCAAGTTCTCGTTCTCACCTAGAATTGCCAAAGCACGTGCAGCTGCCTTGCTGACACGCTTCTCTTGTGAAAGAGTTAAGCGAATTAAAAGGTCGCGCAAACTTTCAGAGTGCATGAGGGTGCGACGAGTCTCCAAGCAGAAAGCCAAATTGCCAACTGCAAATAGAGATAGACGTTGCACCTCAGAGTTCTTGTGTGCACAAAGTGTTTTCAGTGACTTCAGAACGTCTTTCGTCAACATTTTTTGAGCAACATGATCAGAAACAAAAGTTAAGGTGACTACAACTTGCAATACTGATTCTAATTCTTCTTCATTAAATGATTTCAGTACAGCTTCAATAGGCTTCATGATATCACACTTAATAAGTAGCATAGCTGATGAAATATCTGATCCCAGTGATGAAAGAGCAAGGCATGCTTGCTCAACCACATGACGATTATCACTGCTTATCATGCTTATAAGCTGCCTGACAGCATTTTCTTCTTTGCTAATTGCAACTTGGTTGCTACGATCTTCCATTATTTTGGCCAAAGCAGAGGCTAGCAAAGGGTGGTGACAGGAAGAGAACCGAAAAACAAGTGAAAAGAAGGCACTAAGTTTGTGCCTGGCCGCAACGAAGTAGGAATTATTTTCAGTCTCAATTTGTACAGTGACAGATCTAAGACTTTCCAGTGCTTCAATTCTAATATTTGCAAGTGTGAGATGCCTAAGGTTATGCAGTGGCAAAATTTCTGGGAGAAACTCTAGAGGATTTCCAAACAAGCGCAATACACGCAACTTAGGCATTGACCTGAAATCCAGTAATGGGCGGACAAGCTTATTATTCTCCAACGATAATTCCTCCAGCAAAACACACTGTCGCAGTTCTGCAGGTACAGAAACTAGCATGTTGTTGTCGACTGTCAGCACTATCAATTTCTTCAAATCACCAACTTCAGGTGGCAAAACTGACAATTTGTTGTTGTCAAGATGTAGCTTCTCAAGAAGTGCAAGGCGAGTTAATTCAACAGGAAGCATCAGCAAGCCGCAGTTGCAGAGGCTGAGCACGGCGACGGAGCGCCAGTGGTCGGCGAGCACGGGGACGCCCGTGGCAGCGGCACCGTCGACGGCCGGCGCGGGCGCGAGGTTGGATCTGATGAGCCGCGAGAGCACCCCGGCGCCGTCGCCGCTCCCGGCCGCGGACCCCGCGGCCCGCGCCACGCGCACCGACCGCAGCGCCTCCCGCCTCCTGACCACCCGCATCTCCACCGCCACCGCACCCTCCTCGCCGCCGTCGCCCTCCCCTCTCGGGGACAGATCGACGCAGACGGCGTCGTGCGGCGGGGGGAGCGCGACCATGAGCTGGGACTGGAGCCGCAGCGCGACCTGGTCCTCGTCGTCGCCCGCCGACCAGTCGAGCTCGATCCGGAACCCGAACTCGCCGCTGCCGCCGCTCCTCCTCGCCGTCGGCGAAGACGACGACGACGTCGGCGTGGAGCCCGCGCTGGATGGCGTGGGAGGGGAGCCCGGCTGCTGCGGCGGCGGCGGCTGCTGCTGGTGATGGTGAGGAGGTCCATCCGCGAGGTCCCCGTAGTCGAGGGTGAGGTGGAAGATCTCGGAGCTCCGCTTCCAGCCCAGCCCCCACGACGCCATGGCGGGCGCCCCCGCATCAAATGGCGAGGTGGCCTAGGGCTAGGGCGATGCGAGGAGGAAGACGAGGCGAGGTGAGGTGAGGACGAGGAGACGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0382300.1 | 7 | 20118556 | A | T |
| Osa07LNT0382300.1 | 7 | 20116262 | A | T |
| Osa07LNT0382300.1 | 7 | 20118624 | T | A |
| Osa07LNT0382300.1 | 7 | 20118627 | T | C |
| Osa07LNT0382300.1 | 7 | 20118642 | G | A |
| Osa07LNT0382300.1 | 7 | 20118977 | A | G |
| Osa07LNT0382300.1 | 7 | 20119390 | A | G |
| Osa07LNT0382300.1 | 7 | 20119621 | A | T |
| Osa07LNT0382300.1 | 7 | 20119700 | T | C |
| Osa07LNT0382300.1 | 7 | 20119751 | G | A |
| Osa07LNT0382300.1 | 7 | 20121715 | C | A |
| Osa07LNT0382300.1 | 7 | 20122192 | G | A |
| Osa07LNT0382300.1 | 7 | 20122603 | T | C |
| Osa07LNT0382300.1 | 7 | 20119109 | C | G |
| Osa07LNT0382300.1 | 7 | 20118729 | A | G |
| Osa07LNT0382300.1 | 7 | 20115713 | A | G |
| Osa07LNT0382300.1 | 7 | 20115776 | T | G |
| Osa07LNT0382300.1 | 7 | 20116465 | C | T |
| Osa07LNT0382300.1 | 7 | 20117332 | A | G |
| Osa07LNT0382300.1 | 7 | 20117797 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0382300.1 | osa-miR5808 | Translation | 5.0 | 20.339 | 1 | 24 |
| Osa07LNT0382300.1 | osa-miR820a | Cleavage | 3.5 | 24.432 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR820b | Cleavage | 3.5 | 24.432 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR820c | Cleavage | 3.5 | 24.432 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR1850.3 | Cleavage | 4.0 | 17.226 | 1 | 22 |
| Osa07LNT0382300.1 | osa-miR1846a-5p | Cleavage | 5.0 | 11.999 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR1846b-5p | Cleavage | 5.0 | 11.999 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR1846c-5p | Cleavage | 5.0 | 11.999 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR2092-5p | Translation | 4.5 | 14.169 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR1863b.2 | Translation | 5.0 | 22.168 | 1 | 23 |
| Osa07LNT0382300.1 | osa-miR2929 | Cleavage | 4.0 | 14.856 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR5081 | Translation | 4.5 | 13.888 | 1 | 22 |
| Osa07LNT0382300.1 | osa-miR5148a | Cleavage | 3.5 | 15.356 | 1 | 24 |
| Osa07LNT0382300.1 | osa-miR5148b | Cleavage | 3.5 | 15.356 | 1 | 24 |
| Osa07LNT0382300.1 | osa-miR5148c | Cleavage | 3.5 | 15.356 | 1 | 24 |
| Osa07LNT0382300.1 | osa-miR5486 | Translation | 5.0 | 12.526 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR1863c | Translation | 5.0 | 22.054 | 1 | 24 |
| Osa07LNT0382300.1 | osa-miR5487 | Translation | 4.5 | 17.448 | 1 | 21 |
| Osa07LNT0382300.1 | osa-miR5514 | Translation | 4.5 | 24.084 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0382300.1 | 7 | qNFGP-7-1 | Physiological trait | Source activity | RZ471 | RZ753 |
| Osa07LNT0382300.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0382300.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0382300.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0382300.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0382300.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0382300.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0382300.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0382300.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0382300.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)