© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0035000.1
GGCACTGTCTCGACTCTCGAGTCGACGAAAGCAAGATCCATTATGTAACATATATTTAGGTATACATACACATGAAACACGACGGCACTACTAGCCCCACAAGCGGCCTCTAGTTTGTCGAGCAAACAAACACGCAACCAGGGGCTTTTTCTTCGCTGCCTTTCAGACTATAAACAAAGCAACCAAAGCCCACAGCTTCCTCCTGAAGCTGAACCTTACGGAAATTTCGGGATGAGAACTCCTGATCCCGAAAGGGTTTCTTCTTCATTATCATCTTCATCTTTCTTCTTTTCACAGGGAGTTATGTGTCAGTAACATCGCACAAGTTATGTGCAGCACAGGCCTTCAGGTACGACCTGACGCCTTCAGGCAATTCATGAAGTTAAAAGTGCTTGCTTCTTCTGCCAATACTGCTCGAATCTCTGCCTTGCATACTCCTTGTAGTCGAAGTCAATATCATTGACATGATCCGATATTATTCCCCAGAGGCCCCAAACTAGATGACTGGCGAGCGTGTATTTCTCAATGCTTTGGAGAAGGTTCTCCACCTCTTCCGCATCAGGTTCTTCACTTACAGAATTGCTTAGGTACGTCTTCACAAAACGCTTCTGCTCATCAGTGTCTGGATATTTACTGTAGTCCAGTCTATGTGGCTTCTCTGAATGATAGTCTGCTGCCATCTCGCAGAAATGATTAGCGATGTCATACGCAACTGGATTGAAGCTGGCATATTCATAATCGATGATAGTCAACATGTTGGTGTCTTCATCAATCATGATGTTGCCATACTGAAGATCGTTGTGGCAAAAACCAATCCCGTGGTAATCCCCTGAAAATTCTTTCTCCAATGCAGCAATCTCGTTCTCCAGGCTACCCAGCCGAAATTTCTTGGATTCATCAGATGAGCACAGGTTCCTTGCAGTTTTGAGCCAGTTTTTCAGTCGGTCCCAAATGAGTACAGATTTCGGGCCAGGCATGTCAAGGTTGTGGAATTCCCTCAGTTTTGACGCCACCAGAGCTGAAATTTCAGGATCACGAAGGTCTGCTGCAGATAGTGTCTGAAAGAAAGTAATTGCATTAATTTTTGTATATGCTTGAGTTGCTGACGTAACAGGTTGGACAGTTATTCCATCGTGATAACATTTCATTATCACCAGAAAACTTGAGGAGAAAAATCTGATAGTAGGAGTATTGCACGAAATTTCGTTCTTTTTTTCCTTTTGTTCGTCCAAGAAAACAACACAAGATATCCCTTTTATGAGAGTGACACATGTATTAAAGCAAAATGAAGAATCCAGAAAGTGCTTCGACTCGCAATTTAACAGCTATAGCCTAATTCACTTTCTAAAAGAGATTCCGCAAGAGAAATAGACCATGTATGGTCTAGATTTACTCCATTCAGTCCTTACTTTACACCAGTTTAGTCAGCTATCTTGCTTTTCTCAAGTCCAATAAATTGTTTTCAATCAACAGCTTCTCTGAAAGAGACATCTCCTGTTGTCGAATGGACAATTATCAATTCTAGCTGACTAATTCAAACGAAAGAAAAAAAAATCTTTCAAACGAGTTATTAATAGCTTCACCGACTATTGACTTTGTATCACAATTTTACTGACAATACAGGAAAGAGTGCAAAGAAAACTAAATTCCAGCTGTTGACAATACCCTTAAAAATAAGATTGTACGCCTCATGCCACAGAGGCAAATAATTTTGGGAGATAATTGGTGTGGGCATAAACAATTCCTGTTAAGTAGGAGAGATATTTGACTAGGGCATGAAGAGAGATTTTATGAACTGATAGATAAGAAAGGTCTAAGGAATTGCAGATTCCCACGGCAGAACCTTTTAGAAAACGATAACCAGACTGCAATAAATAAGTCGGAATAGTGCCTGTAGAATCTTTAAAGTATCAAGAAGAACGTTAAAGCCCAAATTGCTACGAGTTCAGCTAAAAAAATTATCAGTATGCAAGAACAAACTCCAAAATCTGCCTAATTTTGGTGCTAATAAACTTAGGAAAATAACTTTTCACTAACGCGGTAAAATCAACAAAGATTTATTCGTCCAAAGCACAAAAGGTACCACCAAAATCCCCTAAAAATCCCTACCCAATTTAATAGTTCAAGAGAGTCGAAGATAAACAGAGGAAAACTAAAGGGAAAAAACGGGAGGAGAAAACACAATCCGTGGCGCGAGGAAGGCTAGACAGTTTGGCTACAGCAGCGCGGAATCATATCATATTCATGTGCACCTACCCTTGCGTGGATGAACTCCTCGACGCGGCCGTTGGTGAACCGGCCGAGGAGGCGGGGGCCTTGGCCATGGCGAGACATGCACTCGAAGGTGCGCACCTCGTCCTCGCGGTCGAAGAAGAGCTCCACGCCGTCGCCGTATATCCGCACGAGGACCTTCCTCACCTCCCTCTCCCTTGCGGCCGCCTCCGCCTCCACCTCGCCGCCGTCGGCGGTGGCCGGGGCGCCGTTGAGCCAGCGCACCTGGTACACCTCGTTGGTCATGGCGCCCTTGAGCGGAATCACCTGCAGCGCCCGGCAGTCGGCAACGTCCGCCCACGACGCCGCCATCTCGTGCAGTAGCCGCCGCGCCTCCCTGGGGATCCGTGGCTGCGCCGCCGCCTCCGCCGCCCGCTGGCCCTGGCTCTGGTTCTCGATCGCCACCATCCTTGCTAATCACGTCCTTTTACCGTTTTTTTTTCTCTCTCCCTTTTTGCTCGCGATCAAGAAAGAAGAAAAGCTGAAGCGAAGTGGCTAGAGATGAGAAGAGGAATGGCTAATCACGCTTTCTAATTTTTTTTTCTTTTTCTTCGATTTGGATATCTTTCCGAAGCAAGATTAGAGAAAGAGTTGCAAGTAACAAGCGTACTAGCGAGTTTTCCTCCAATCTGATCCGCTATCGCTACGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0035000.1 | 1 | 29842922 | T | C |
| Osa01LNT0035000.1 | 1 | 29843495 | A | C |
| Osa01LNT0035000.1 | 1 | 29843814 | T | C |
| Osa01LNT0035000.1 | 1 | 29844148 | T | C |
| Osa01LNT0035000.1 | 1 | 29844417 | T | G |
| Osa01LNT0035000.1 | 1 | 29845208 | G | C |
| Osa01LNT0035000.1 | 1 | 29845796 | A | C |
| Osa01LNT0035000.1 | 1 | 29846056 | G | A |
| Osa01LNT0035000.1 | 1 | 29846614 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0035000.1 | osa-miR5824 | Translation | 4.5 | 11.823 | 1 | 24 |
| Osa01LNT0035000.1 | osa-miR5827 | Cleavage | 4.5 | 10.766 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR5337b | Cleavage | 5.0 | 18.539 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR156a | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156b-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156c-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156d | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156e | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156f-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156g-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156h-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156i | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR156j-5p | Translation | 4.5 | 13.109 | 1 | 20 |
| Osa01LNT0035000.1 | osa-miR167a-5p | Cleavage | 5.0 | 15.966 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR167b | Cleavage | 5.0 | 15.966 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR167c-5p | Cleavage | 5.0 | 15.966 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR417 | Cleavage | 5.0 | 16.53 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR820a | Cleavage | 5.0 | 20.506 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR820b | Cleavage | 5.0 | 20.506 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR820c | Cleavage | 5.0 | 20.506 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR1431 | Cleavage | 4.5 | 10.991 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR396f-5p | Translation | 5.0 | 15.551 | 1 | 22 |
| Osa01LNT0035000.1 | osa-miR2907a | Translation | 5.0 | 12.58 | 1 | 22 |
| Osa01LNT0035000.1 | osa-miR2907b | Translation | 5.0 | 12.58 | 1 | 22 |
| Osa01LNT0035000.1 | osa-miR2907c | Translation | 5.0 | 12.58 | 1 | 22 |
| Osa01LNT0035000.1 | osa-miR2907d | Translation | 5.0 | 12.58 | 1 | 22 |
| Osa01LNT0035000.1 | osa-miR2919 | Cleavage | 3.5 | 12.714 | 1 | 19 |
| Osa01LNT0035000.1 | osa-miR2919 | Cleavage | 4.5 | 19.892 | 1 | 19 |
| Osa01LNT0035000.1 | osa-miR2863c | Cleavage | 5.0 | 13.328 | 1 | 24 |
| Osa01LNT0035000.1 | osa-miR5508 | Cleavage | 3.5 | 11.222 | 1 | 21 |
| Osa01LNT0035000.1 | osa-miR2275c | Cleavage | 4.0 | 21.745 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0035000.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0035000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0035000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0035000.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0035000.1 | 1 | dgl1 | Morphological trait | Dwarf | nan | nan |
| Osa01LNT0035000.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0035000.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0035000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0035000.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)