© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0383000.1
CAAATACATCTGTGTCCATTTGTATTTTTGATTGTTTGTGTGTCTGCAACAACATCAAGGATGAAAAATCTAGTATCATCGCTTCAAAGCGACATGTATGATGTACCCCTTTTTATGCAAAAAAAAGAAGAGAAAAATAACTGAAGAAATCATGACAGCAACAGAGAAGAGAATGCAACTACCATCGCATACTTCACCATCAGACCCCATTCAGCCTGATCTCTTCACTGCCATTCACTCTATATTCTTCCTTGACCCTTAGAAGAGCATCAGTTTTTTTGATGCCTGGGTCTTTGTAGCAACATCATGCCTCCTTTACAGATTGCATTGAGGTTTGAGAACAAAACGAAAATTTTTCTTCAGTTTCAACAGCCGGCGTTTCACCGAGCATCGCTGCTGCCGCCGCCGCCGCTGTCGCCGCCCATCTTGCTCATGGAGAGTGTGAAGTAAAGCAGGATCAACGTTCCAACGCTTGACCTGCAGAAAAGCAGAAAACCTACATGAGCATTCACCATCTCTGAAGAGTGCAGTACTGATGAATGAAACGATTTCGTAAATTCAGAGTTCTACCTACAAGATCAACCAAACCAAACCAAAAAAAGGAGGGTTGATAAATGTGACGATGGCCGCTCCATTATCTGACTTACCGAATAGGTACACATTGATAAATCGCTCGATAACTAGTCAAGTTGAATAAAAAAATCAAACCAGAAGTCAAACTTTTTGGTAAAATTGTTCAACTTTATACTGTTTTCGTCAGTAAGGTTGAGTTTGCTAAAATTGTTCACCTCCATACTTAGGAACTACACCTTCTCGCACGAAAACAGTGTTACCCATTAATACGTGATTAATTAAGTGTTAATATAAGAAAATTTGAAATATAGATTAATATTATTTTTTAAGTAATTTTCTTATAATTCTTTTTTAAAAAACACATCATTCCATAACATGAGTGTGGAAAAAAAAAGGGTGAGTTGGCAAAGAAGGGGAAAGAACACATGTAACCAAGGGGTTATCACAGTTATCAACAAAATCGCTCGGAAGCAGTATTCAGTGACTTTTAAAGGTTCAGTAAACCTTGTCCAAAAGTCACTCAAAAAATGAAGGATTTTCTTTTCTAAAGCAAGGGTCATCATACTGTACACGAGAACGGTTGTTCGTCAGTCGCCGTCTTTTCTCCCGTATATCGCTGTAGCCAAACCGGAGCTGACAACTAAAACTAGTTCTGACACGTAGACTCGCCAACGAGAAACCCGGCCGCTCTTTGTGCTGCAAACTCCTGCACGCATCACCCATTCATTCATCCACCGGTCGCAGCGAACCTACTACGATCTGAAAAGGCTGCAGATTAATGCAGCCGCTAATACGAGGCCATGTTCCACATTTTTTTTGCGTTGTTGGGGACAACAGGACAATTAAACTCTTGTGCCCTACGGTTTAGGAAATTCGTCAATTATTTTTCTTTAAGTACCACGGTTTTCGCCTAATCACTAGCAAGAAATTAGCAAGAGTGTACTTGTAGCAGCTCAAAAGAAATGGTTCTACTTCTAGCTATTGGGAAACTGCACAACTCGTAAATATTTTATTCAGATATTTACCGTTTTGAACTTATTCTTTTTCTTATACTATCAGTATTATCACTTGTAAATGATTAGAGCAAGTACTATGGACTTCTTAGCTCTTGCATCAAGATACTATGAGATACTATGGATCACATGATGAGGTGGAAAAGATAAGTGGAAAAGAGAAGGGAAAAAAAGGAGAAGTCATCCGGACAAATTCTATACAAACTTACAGAGAAATAAGAGAAACAGACCAATGAATTAAGTGAAAACAAATAAAGAAAGAAATATTATGGTAAATTGGAGCAAGTGTATTAGAGATAATTTGTTGTATTAATTAATAATAAGTAAATGACGTGAACAAAATTAGAGATGAGTATCACCTCTGCTATAAAATTTGCTATAAGTGGCTATTGCCAGTTGACTTACAGTGTGGCGAAGAAGAAGACCACCCTCCGGGGATCGAGCCACGGCGCCGCCGGCTGCCGCCCGAGCCGCCGGGACTTCCCTCCCGGCGTGCCGGCCACCGGCGTGTGGACGAGCCGGCCGAGGCCGCCCATGTCGTCGGCGGCCGCCACATGCACGAAGAGCGGCGACAGCGGCGGCCTCTTGCCTGTCCCGGCGGCGCCATTGCCGTCGCCGTCGGCCGGCTTCCTTTCCCCCTTCCTCGACAGCGACCTCACCACCTTCTGTTGCGTCGCGTCCGCGGCATAACCACACAAAGAGGAAAGAATCAATCAAATCTTTGGAAACGAACGGAAGAAACGGAGGCTCGTATGTATGTACAATTGTACATCGCCGACGTCGCCATCGCCGCGCGCGCTCGCGTCTATCCAACTTACCGGTGTCCGTGGTGGCGCCGCCGTGGTGTCCGGGCCGTCGCCGGCGAGCGAGGAGAGGGCGCTGACGTCGAGGGCGATGAACCCGCCGCCGCCGACTGCTCCCGCGCCGGCGCCGGCGTCCAAGTTCGATTGGCCAAGATCGCTCGCCGCAAGAACAGGTTGGTTGGAGGCGGCGTCGCCCATGGTCGCGTGCTGCTGCTGCTTCTGATGATTCCTTTGCGTCTTCTCTTTTGTTGTATCCGGGGCTTCGGTTAGTTCGTTGGGAAGTGGTAATAGGAACAATGGAATACTACCAAAACGAGGAACCGGAGGGAAAAGCACTGCCACTTTGCTCTTTTTGAAGGGCAAAAAGATTCTATCTCACACGGGCACACTCAATCTGCCGCGAGCAAATGGAGAGCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0383000.1 | 7 | 20770779 | T | C |
| Osa07LNT0383000.1 | 7 | 20769356 | C | T |
| Osa07LNT0383000.1 | 7 | 20769667 | C | T |
| Osa07LNT0383000.1 | 7 | 20769915 | T | C |
| Osa07LNT0383000.1 | 7 | 20769976 | A | G |
| Osa07LNT0383000.1 | 7 | 20770518 | T | G |
| Osa07LNT0383000.1 | 7 | 20771225 | T | G |
| Osa07LNT0383000.1 | 7 | 20771264 | A | C |
| Osa07LNT0383000.1 | 7 | 20772273 | A | T |
| Osa07LNT0383000.1 | 7 | 20772303 | T | G |
| Osa07LNT0383000.1 | 7 | 20771639 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0383000.1 | osa-miR5542 | Translation | 4.0 | 20.793 | 1 | 21 |
| Osa07LNT0383000.1 | osa-miR156l-5p | Cleavage | 4.0 | 19.789 | 1 | 21 |
| Osa07LNT0383000.1 | osa-miR535-5p | Cleavage | 5.0 | 19.563 | 1 | 21 |
| Osa07LNT0383000.1 | osa-miR1430 | Translation | 4.5 | 24.991 | 1 | 21 |
| Osa07LNT0383000.1 | osa-miR1861b | Translation | 5.0 | 16.296 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861b | Translation | 5.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861c | Cleavage | 3.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861d | Translation | 4.5 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861e | Cleavage | 4.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861f | Translation | 5.0 | 16.296 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861f | Translation | 5.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861i | Translation | 5.0 | 16.296 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861i | Translation | 5.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861k | Cleavage | 4.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861l | Translation | 5.0 | 16.296 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861l | Translation | 5.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861m | Cleavage | 4.0 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861n | Translation | 5.0 | 16.296 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR1861n | Cleavage | 4.5 | 13.542 | 1 | 22 |
| Osa07LNT0383000.1 | osa-miR5144-3p | Cleavage | 4.5 | 17.153 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0383000.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0383000.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0383000.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0383000.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0383000.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0383000.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0383000.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0383000.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0383000.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)