© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0383100.1
TGGAGATTTTACATACAAAGCATGCCGAATTAAACACAAGATTCACCAAACTCGTGCCATCCCACCACGTTTGGAGTGATCAGCTCGGCATGCCGAATTAACACACGCAGGAACAGAAATGCAGGATGCAACTAAAACAATCTTAAAAACAAAAATGCACACAAGATTACAATGTTGCCATCAACACTGAATACACTGAATACATAAAAGTAGGAAGAACATGAAGGCCTTATTTCATCATCTTTTCATCTTTATTCATAGTAGAAGAAACTGTAATAGAAATACCATCTTTTCATCTTTATTCATAGTAGAAGCAACTGTACCATCTTTTCATCTTTATTCATAGTAGAAGCAACTGTACCATCTTTTCATCTTTATTCATAGTAGAAGCAACTGTAATAGAAATACCTCCCAAGTTCCTTTCATCTTTATTCATAGTAGAAGCACTGTAATAGAAATACCTCCCAAGCAGGAGGAGCAGCATCAACAATCCTTATCCTTGACGATCGAAGGTAATTTGAGCGTGAAAGTAATACCACCATTGTTGTGTTCACTGACTTTGATTCTCAGGTAGTTTGAGCGTGAAAGTAATACCATTGCTGTGTTCACTGACTTTTCTTTTCAGTTTTTCCAGATTCTGCGGGTTGCACGTTCCCCCCTTGAGTTCGAGGTGTGTGAGACTCTGCAGCTTACGGACCCCTGAAAGCTTCTCCATGTGAGTGAAGGACCAAACTATCTTTTCAAGCTTATCAGGGTTTCGGTAACCAAAGGTGACGCTGATAATAATATCATCTTCAATGATAAGGTCCATGAGATTCCCAAAACTCCAGAACCGGAGAGCGCCTTCTGCAAATGAATGGTAGCAAAGCCTGAGATAGCGTATGCCATCGAGCCTGCTAAGTACATCGAGGGCGCCCTGATTCAAAAAGGTGTCACGTAGAGTTATCTTGGCAAGGTGATGGAGCTCCTTGATCCTGGGAGGCAACCTGCTTCTGATGCTACAGATGTGTAGGCTCTCCAGAAGCTTTGGAGGTCTCAGTAAAATAGCATCAATAGCATCCCAGTTACCCGGTGGATCCATTCGGATTGACAAGGACAGAAGACCTCTATGGAGTTTGTCAACCTGAAGGAATAAATCTATCAAGCTAGCTTTCGTGCCAGATAGAACCACACCCAGCTTCTTCAGGTGCTCGAGTTTGTCACCAATGTTGTTCAGTTCTGTAGCACTGTTGGAAACTTTGACATGGGACAATATCTCCATCTTTTCCATAGTTGCAACAGCACGAGGCACGCAGACAGTGGAGAAGAATTCCTTGGACTTGACAATGTCTTTGCCTGGGCAGACAATAATGCACCCAGCAAGCAGGTGCTTTAGCATTGGCAGCGCTGTGTGGAACACCTGTACCCTTGTTCCTCGGATGTCAAGTGTCTCTAAGAGCCTCAGCTGACCTATTTGCTTGGGCAGTTGGGCAACATCTGTGTTCCGGAGACTTAGATACTTGAGTTTGTGAATCTTGCATACGGTATGGAGGTCGTTTGCCTTGAGGCCCTTACGACCTTCCAAATCGAGTACAGTCAGCAGCAACCTTGAAGTGCTGGAAAGTGAGTTCAAGAACCTTGTGATATTAGAGTTAGCCGGATGGAGTTGCATGCCGTTCCGGATTGAGTAGAGGAGATCCAAGTCAAGTGGCAACTGGTTGTTGAGCAATAGGTCCTCAACTGTCGAAGACTCCCTGTCTATCAAATCGGCAACCACAGGATGCACAGTGCAGCTCTTTACCTTACGTGCACCGCTGAGTCCAGAAGGAACAATAAGCTTCTGTCTGAGCATGGCTTCGAAACAGTGCCCAGCTTCAATCTCTGCACTCGACTGATCCACTTGGGTAATCAAGCCTTGGGCAACCCATCGTCTTAGTAAACTTGCTCTTCGGACGCCATCGGGCATGCTGATTCCACGGGTGAAAACGGTTGAATACCATAAGCAGTTCTTGTAATTATTTGGCAGTGCTTGGTAGCAGAAGGCCATTATTCTGTCCTGCCTCCCATGATCTGTATATTCTTTACCAAGGCTTGTATTCAGGACCTGCAACTGGTGTTCCGTCGTTTCAGGATTGTAGTAGAGGGCATGGAGGAACATCTTCATGCAGAAGACATCAGGGCAGCATTGGGTGAGGATATTGCACAAAATTCCTTTCAAGTGTCTGTCATCGTATCTGTGGGGAAGCAGGGCGAGCGCTCTGTTGAGGTAAATATCAACGAGAGAGTAGATTACCGGAGGCCCACATTTGGCAGAGTCACAGCAATATTTTGCCATCTTACTATCATTTGTGCAGAGTATTACTGCACTGTCAGAGCAACCCGTCGAGCTCAACAATTCCAGGACCTGATGCCATAACACTGGGTAATTCAAACCGGAAAGAACAAGCAGCACATTTTCATTGCTCAATTTCTTGGCAAGCCTCTGCCTGTCTTCTGCCTCATTGTCTGTCTCCCTTTCTTTCGGGTGTCTCAGCTTGTCAACCATGGCCTTTGTAATCTCCGAGAGAATCGGAGGTCGTTGGAGAGCAACGTGGAGCTCCTCATCAGTCCATGGATTACGCCAGTGACTCTTGTAACGCTTGAGCATGGTCTCTCCAACAGCAGCTTCATCCATGCCATCTTGCACACTGATTATGACGACCCTGATATGCTGCTGCTTGTTGCCACCGTCCGACTGGGGCAGCAGCGGCTGCTGGTCATCACCATCCGACTGGGGCAGTTGCTGCTGCTGCTTGATGCCGCCTCCCGACTGCAGAGGCGGCGGCTGCTCCTTGTCACCACCCTCCGACTGCAGAGGTGGCGGCTGCTCCTTGTCGCCACCCTCCGACTGCAGAGGCAGCGGCTGCTCCTTGTCACCACCCTCCGACTGCAGAGGCAGCGGCTGCTCCTTGTCACCACCCTCCGACTGCAGAGGCGGCGGCTGCTCCTTGTTGCCGCCATCTGACTGCAGTGGCAGTGGCTGGACCTTGTCATCCTGCTTGTCGCTGCCGTCAGACTGGAGTGGTGGCTGCAGCTTGACACAGCCTCCCGATTGCACAGGCGGCGGTGGCTGCTCCTTGTCATCATGCTTGTTGCCGCCATCCAACAGAGGCTGCGGCTGCTGCTTGTCGTCGCTGTTCAACTCCTCCGGTGGCTTCACCTCAACGTAAAGATATTCTGTGAACGGCTTGAGCCGCGAGAGAGCCTCATCCACGCTGCCGTAGTCGCCATACCAGCCATCCTCGAGTATGGCACGCCGGGAAGGATTGTTCCAGCTGCCAGCATTGGTGCGCCTCTGGTTGCGCGGCCTCACACTAGCATCCCTGGGCTCCATTGTGGTGGTCACCTCGACGGGAAGCTGGTGATGAGAAACGGCAATGCCGTACCTCGCCTGCCTCTCACTAATTTCGCGTGCCTGGATCTTGAGCTCGCGGATCCGGGTGACGACCCGGTGGCGAGCTACCATTTCCCAGGGCAGCCAACCGCAACGCGCGCTACCAGACTGCGTGTAGAGCTCAACGCAATTTCTGGAATCGAATGCAAGCTCCATGACCTGCTTCATCCACGGGCGGAGCTGGTAGTCACCGGCAGTGGTACTCCCCTTGTTGGCCACGATGTGGCGGAGCACGTTGTTCATGCTCTCCATCTCTTGCATGATGAACTGCAGGTCCTCACGGACCCTGCCAAGCAGCCGGGCCTCGTCCTGGATGAGGCCCAGCACCAAGTTGACAGCGCCAAATGCTATGTCGGCCATCTCTTCTTCTTAGCTCTAGCTAGCTTATCAATGATCCGCCTATCTTCCGATCGATCAACAGTGGCAGCTGGTAGCTGCTACCATCCGGCCATGGCATGCAATGCAATAGGAGGTAGGAGCAGGAAGCAATTCCCACGTATGGTTGATAACCCTCTCCTCTCGTCTCACGGCAGAACAAAACAGGACTGCTTTTGTTTCTTTGTCAGCAGGATACAATTCGTGTTCCAACATTATTCCAGCCTACGGGCCATTTGGAGTCCAGCCATCTCTCTTGTCGTAAGCTCCTTGTGCTATTGCCTGCATCTTCTCTGCCCCTTCTACAATCATTTTATGCTTTGCTTGTGATCTGCAAAAGAGCAATTCGGATGGTATCTAACAGCCGCCTGCCCCTGAAGCAAAAGCAGCTGCATTTCTTGCTTTCCAAAGATACCAGCTTACAGCTGAACACCCAACAGATAGCTAGTCCGGCCCATTTGGATATCTTCAATTAGAGGCAGAATCTTGAAATTTGATTAATGCTGGGATCAGTGTATTCTTTCTTCCAGCATTAGGCTGTGTTTAGTTCTGCACTAAAATTGGAAGTTTGACTGAAATTGGAAGTTTAAAGAAAAAAGTTGGAAGTTGGTGTGAGTAGAAAAGTTTTGATGTGATGGAAAAGTTGTAAGTTTGAAGAAAAAATTGGGAACTAAACAAGGCCTTAATCAAGTTCATTTGTATTAGTGTATCCCAGCATCAATCAAAATTCATCTGTATCTATTGACAGCTCACTCTCTCCTTCTATGTCTCAAGCTCCTCTCGTATTTATTTTCCAAGGAAAAGATGTTTTGCAAAGTGAGATTGGGTGTCAAAATCAGGGAAAGGCTCATACTAATTCTCATGCTAGCACTCTTTTACTCTTTTAGCTGTACCTTCCGTGAGGGAAGAGGGCATCTTCGCTCTTCTCTATTTTGATCTTCTCCACGAGGTCGCCACTGAAATGTCCACACAAGGAGGAGATGCATTTCCCTATTTGCGCCTCCTTGTGATTCCAAGCCTTGCATCTAGGTAAAGAACAAGCATCTCAATAAAAGGAGCATTCCACGCTGAGTCGCTGACTGACATCCCAACCGCTGCCTCTTACGTGCTGATTACCGAACAGCTTAGTACTCATGTTAATAACACCAAGGTGAGTTGGCTCCTCCAATTTTCATAGCTTGCACATTTGACAATTTGGTACCACGCCGTGAGGATTTCTCATCCGTTGAAGGACCTAAGAACTTCCTCTTAGATCCTCCATCTCCATGCCCCCTCGGTCCGCGCCATGGCCATGGGACAGTAGGAAGGCCGATGACGGGAGATGGGAGGGCCGGTCACCCCTCGTCGCTGGGCCGGCGCCCGGCGGAGGCCCACCGGAGGTGTGGAGGCGTGGAGAAGGACAGCAGAGCGAGCGACGGCGAGGGCGGCGGCGGCGACCGGCGAAGGCCTGCACGCCTGGATGCATGGATGGAATGCAACGCTAGGGGCTGAAGGCTAGCGGCGTCGCCGGAAGTCGTCGGGATGGCGGAACGGCCGAGCCGCCGCGCCGCCGAGGAGCGGCGCGGCCGCATTGCGTGTCGGCGGTACCAGTTGGCGAGCAGGTCGAGAGAGACGAGAAGTTCGCGAGCTGATAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0383100.1 | 7 | 20819168 | A | G |
| Osa07LNT0383100.1 | 7 | 20818400 | G | A |
| Osa07LNT0383100.1 | 7 | 20818610 | C | T |
| Osa07LNT0383100.1 | 7 | 20818376 | C | T |
| Osa07LNT0383100.1 | 7 | 20818566 | C | T |
| Osa07LNT0383100.1 | 7 | 20819222 | T | C |
| Osa07LNT0383100.1 | 7 | 20819773 | T | C |
| Osa07LNT0383100.1 | 7 | 20820807 | C | T |
| Osa07LNT0383100.1 | 7 | 20821038 | G | A |
| Osa07LNT0383100.1 | 7 | 20821266 | G | A |
| Osa07LNT0383100.1 | 7 | 20821530 | A | T |
| Osa07LNT0383100.1 | 7 | 20821761 | A | G |
| Osa07LNT0383100.1 | 7 | 20821836 | A | G |
| Osa07LNT0383100.1 | 7 | 20822170 | A | C |
| Osa07LNT0383100.1 | 7 | 20822267 | C | G |
| Osa07LNT0383100.1 | 7 | 20822276 | T | C |
| Osa07LNT0383100.1 | 7 | 20822806 | T | A |
| Osa07LNT0383100.1 | 7 | 20822965 | T | G |
| Osa07LNT0383100.1 | 7 | 20823121 | T | C |
| Osa07LNT0383100.1 | 7 | 20823211 | G | A |
| Osa07LNT0383100.1 | 7 | 20823303 | C | A |
| Osa07LNT0383100.1 | 7 | 20823573 | A | G |
| Osa07LNT0383100.1 | 7 | 20823819 | T | G |
| Osa07LNT0383100.1 | 7 | 20823873 | T | A |
| Osa07LNT0383100.1 | 7 | 20818507 | A | G |
| Osa07LNT0383100.1 | 7 | 20822540 | A | T |
| Osa07LNT0383100.1 | 7 | 20818611 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0383100.1 | osa-miR5801 | Cleavage | 5.0 | 13.744 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5804 | Cleavage | 5.0 | 16.427 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5806 | Cleavage | 3.5 | 19.297 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR812v | Cleavage | 2.5 | 14.238 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5821 | Cleavage | 4.5 | 15.855 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5823 | Translation | 4.5 | 17.501 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5830 | Cleavage | 5.0 | 9.018 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5830 | Cleavage | 5.0 | 9.746 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5830 | Cleavage | 5.0 | 9.534 | 1 | 24 |
| Osa07LNT0383100.1 | osa-miR5337b | Cleavage | 4.0 | 17.504 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR397a | Translation | 5.0 | 21.135 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR159f | Translation | 5.0 | 23.892 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR172c | Translation | 4.5 | 12.65 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR435 | Translation | 5.0 | 14.118 | 1 | 20 |
| Osa07LNT0383100.1 | osa-miR444b.1 | Translation | 5.0 | 21.776 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR444c.1 | Translation | 5.0 | 21.776 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR1853-3p | Cleavage | 4.0 | 14.954 | 1 | 22 |
| Osa07LNT0383100.1 | osa-miR2100-5p | Translation | 4.0 | 20.782 | 1 | 22 |
| Osa07LNT0383100.1 | osa-miR2864.1 | Translation | 4.0 | 19.771 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5487 | Translation | 4.5 | 19.719 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5498 | Translation | 4.5 | 15.543 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5508 | Cleavage | 4.5 | 14.069 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5510 | Translation | 4.5 | 17.035 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5510 | Translation | 5.0 | 20.482 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR5510 | Translation | 5.0 | 21.71 | 1 | 21 |
| Osa07LNT0383100.1 | osa-miR2931 | Cleavage | 5.0 | 13.433 | 1 | 20 |
| Osa07LNT0383100.1 | osa-miR435 | Translation | 4.5 | 14.201 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0383100.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0383100.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0383100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0383100.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0383100.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0383100.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0383100.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0383100.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0383100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)