© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0383400.1
GAGTAATTAAGTTTCTTATTCATTTCAACACGAGTGAACGATACATTTATTACTTACTTAAAATTCCAAACCGGAATACATACAATGTCGTCCTTATTTTTATTTGACCATAATATGGACTTATTCCTTTCTTAGAGAATATGGACTTATTCTTCAATCCCATCCTCTTACTGCCGAGTCTTCTGTACATTCAAGAGTTGTTTGGTGAGAGTACGCAGTTTCCAATCTTTGGTTGTTGTGTGACAATGGTAGCAGCGCCGTTAAAATCACATGACCCACTGGCACGACCGGTAGTCTGATAATAGTCGTTGAATGCATAGGTTGCATGCGCTACCTTGGTGTCAGGGTCAAAGCATTGCGCACCACGCTGGATAGCGCTGCAATCTGCGCAGCTACCGCATGCATAGTCTAGCGCATTCTGCAAACGTGTGTCCCCAACCTCCGGTTTCGCAATGCACCAGCTTGGGTTCGGGTCGCAGATACTTGGTGAAGGCTTGTAGACAATAAAAGCAGCACCAGAGAAGTCACATGTACCGCTAGCTTGGCTCTTACGTTGGTAGTAGTCATTAAACGCGTAAGATGCGTGTGCGACCAAGGTGTTTGGTGCAAAGCATGTCTTGCCTGGTTGGATAGCACCACAATCTGCACCATTACTGCAAGCCCAATCCAACGCTGCTTGCAGCCGGGTGCTCCCAACTGCTGAATTTGCCACACACCAACTTGCTTTTGTAGGGCAAACATTACCACCACCACCATTGTGAAAGTCAACTTGGTAAACCTCCGTCCCGTCTGGGTAGAATAAGCCAAAGTTTTGTTCTACAGATGCTCCGCCCTTCAAATTCTCGTTGAAAAGAGCAAAGATGTATACGGAGACATCAGGCATACCGGTGGCTCCGAATAGTGCACGACTGATAAGACCATTGTTAAAAGCTTGGGCGTTGGCTTTTGTAGCCACGTCTACTTGAACATCATCTAGTGTGGACAACTGAGGGAGCCGACCACCAGAGGGATGCCCACATTCTGAACATTTCACGGGTATCCTTGGAGACGGGCGCCCCCGTCTTGCTTGGGCCATTGAGACTCTCACACTACCACCTGAAACATGGTCTATAGCGAAGTAAACAGCATCTAGCTGAGCATCAAAGAGGCTATGGTATGTGATGCCACTTGCTTGATCGACCACAGGAGAGGCGTTGGGGCCAAATACAGCATAATCACGAGAGATTTGGCCATTAGAATTAGCCCAGGCAATATATGGGTAGAAATTAACCATGAGATAGGAGTTGGTTTGTTGCAAGAAGTCGATCATGGGACTCATCACCGACTGGGCGATGTTATCTTGGAACACACCTGCGGATGGCGGGAATGACACCTTGACTGAATCAAAACTAATGGGTGTTGATACCTTTATTGCGTCGGCGAGGCCCAGCCTCGCCAGCGCCGCCTGCACATTCCTCATGGCCGATACCAGCTGTGAGGTCAGGTCAGGTGCTTGCTGAAACACCTCGTTCCCCACGGCCACGCCGTTAATTTGTGAGGAACGGTAGTACGGCAACACGTAGTTTTTCACCCAACTGAGCGCACTATTGAAATCCTTGGCGGAGCCAGCTACTAGATCTCTATTGGACATCGCCACCATCACCTTGATGTTTTGGTTGGCCAGCGCGTTTAGCACGGTCGGGTCGGCGTCGTAGATCCTCACCATGGTGATACCCTTTGCCTTGAGAAGGCTAACCACGGACGGTGGATCTATCAGATTATTCCCATCCCTCCCGTAGCACACGCCCACCTCGCCCCCATCTGCACGTGAGAGGAAGAGCAGCGGCAATGCGGCGGCAAGGATGAGGTGAGCGAGAGCGAGCGCCATATGGCCTCTTGTCCTGCGAGCCGTGGCGATCGAGTGGCAGAGGAAAGCAGGGTAAAATATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0383400.1 | 7 | 21282240 | A | G |
| Osa07LNT0383400.1 | 7 | 21280410 | T | C |
| Osa07LNT0383400.1 | 7 | 21280458 | T | G |
| Osa07LNT0383400.1 | 7 | 21280681 | A | G |
| Osa07LNT0383400.1 | 7 | 21280715 | A | G |
| Osa07LNT0383400.1 | 7 | 21280977 | A | G |
| Osa07LNT0383400.1 | 7 | 21281433 | A | G |
| Osa07LNT0383400.1 | 7 | 21281463 | C | T |
| Osa07LNT0383400.1 | 7 | 21281566 | T | C |
| Osa07LNT0383400.1 | 7 | 21281775 | G | A |
| Osa07LNT0383400.1 | 7 | 21281874 | A | G |
| Osa07LNT0383400.1 | 7 | 21282009 | T | C |
| Osa07LNT0383400.1 | 7 | 21282396 | G | A |
| Osa07LNT0383400.1 | 7 | 21282415 | T | C |
| Osa07LNT0383400.1 | 7 | 21282459 | T | C |
| Osa07LNT0383400.1 | 7 | 21282545 | A | G |
| Osa07LNT0383400.1 | 7 | 21282087 | A | G |
| Osa07LNT0383400.1 | 7 | 21282050 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0383400.1 | osa-miR6256 | Cleavage | 4.5 | 22.643 | 1 | 22 |
| Osa07LNT0383400.1 | osa-miR528-3p | Translation | 5.0 | 17.111 | 1 | 21 |
| Osa07LNT0383400.1 | osa-miR395x | Cleavage | 5.0 | 23.291 | 1 | 21 |
| Osa07LNT0383400.1 | osa-miR5152-5p | Translation | 4.0 | 24.043 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0383400.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0383400.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0383400.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0383400.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0383400.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0383400.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0383400.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0383400.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0383400.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0383400.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)