© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0383700.1
CTACAGTATCAGTGTGCAACAGTACAAACATGACTTCCGTTGATTTAAACAGGCTGATAACAGGAGATATTATTAAGCTCTAACAATTTCAAATTGATTTTATTGAGCCAAAAACTCGGTACCTAGCTAGCGCAGCTTAATAAGAGTTTGTTGTACAATTCCCGGTAAATGCAAGGAAGAGGAGGCCGAGGTTCTTTCAATTCTCATCCTACAATACTCATCTGGGCTCAAGTTCTGTGATCGGCGCTTCATTTTGCGACATTTTTCTTGAGTTGTGTGGGTTCTGCTCTGAATTTGCACCTTAGCTAGCAGTAGCACCAATCTCCTGGACCCAAAATGAAGGCCTGGACAAGCATGGGAGACGGACTGTACCAGTACTACTAAGCATGGCATTAACAGCTGACATCAATGGCCTATCAGCAGGTTTCGGTTGAACACAGAGTAGCCCAATGTGGATGCACTTCAGCACCTTATCAACTGGATAGTGGTTTCCCAATGATGGATCGATCAACTCGATGGCTTTATCGCTAGTCCAGTGCTCCCATGTAACATATATGAGATCAACCACATGGTCAGAACCGTAGGAGCCAAAGTTTCTTCTTCCTGTGATGATCTCTAAAACCAGGACACCGAAACTATACACGTCTAACTTCATTGAATATTGTCCGCGCATCGCATACTCTGGAGACATGTATCCACTGTAGCAAGAACATAACTTTTACTGCATGATCTATTGACTTCATTATTTTAAAGGATTGGCCATACTTACTAAGTCCCAGCGATACGGTGAGTGATAACTTGTGATTGATCCCTTTCGAATATCTTAGCTAGACCAAAGTCAGAAATCTTAGGATTATAAGCAGAATCCAAGAGAACATTGCTTGCTTTGAGGTCACGATGAACTATCTTCAGTTGAGAATCTTCGTGAAGATATTGCAATCCTCTAGCTATGCCATTTATGATCTTGAACCTCTGGCCCCAATCAAGCTCTTTGATTCTCTCTGCATCAAAAAGAATGGTATCGAGGCTTCTATTGGGCATATATTCATATGCAAGTATTTTCTCATTTTCTTCTAAGCAAACGCCAATAAGCCTGACAAGATTGTTGTGGTTCAGCTTAGCAACCAAAAGTAGTTCAGTTTTCAGCTCTTCAATTCCTTGTCTGGAAGTCTGTGCGAGCCTTTTCACCGCTATTTCCTGACCTTCTGGTAGATCTCCCTTGTAAACTACACCGAAGCCACCTTCACCAAGCCTTTTGTGTTCAGAAAAGTTATCTGTAGCAGTTCGTAGTGTTTGTAGATCAAGAACGAGTGAAGCAAAACTCTGCATCTCATCTTCGCTAGACTTTGGTCGTAATGTTTTTCTTGCTAGTCTCCGCCTCCTCCAACTCGTCGAACAGAACCATGCTGCAATAGTAGCTAATACTAGAGCAATTGTAGGCATTGAAATGGCTAGTATTGCACTTCTCTTGTTTTTCGATCTTTCTCCGGCTGCGGTCACCGGTGGCGCCGGTGAAGGCGACGGCCCCGGGAGTTGCAACAGAGAGCGGCCAGAGAAGAAAGGGTATACCTCAAACCATAAGTTGCATCGCACGCCCAAAACTCGCCCTCCCATCCTCCCAATCAAATTCCCAGATACCATCCTCCCAACTATATCCTCGAGGCAGCTCCGGCAAGCAGTCGCCGCCATGTCTGGCGTGCACTGCGCCAGCGAGTAGATCTTGGGAAAAGTTGTCTCGTCGAACGCCTCCTCCCCCGTGCCGAACCGCCTGACGGAGTCCGTTGCTGCGTAGTCGGCGGTGGTGTTGATGAGTCGGACGACGGCGGCCTCAAAAGCCGGAGCCACTGCCGCGCTGACATTTTGGGCTTTCCAAGCAACGACCATCCCTTGGCTATTGGAGGTAGGGCTGATCGGGAAGGCGTCGTTGGCGAAGCGGAGGATGCAGGTGTCGTCGTAGACGATTACGGTCTTGACGAGCGGGCAGAGTTCCTGGGCGCTCTGAATGGCCGCGGCAACGCAGGTAGCGCAGGAGGAAGAGTTGGTATCGCCACGACAGAGCGCGAGGGCGTAGATGGCATCGGGAACTGTGCCCGAGGAGCCGGAGGCGAAGAGGGAGGGGGAGGAGGAGGCGTACGATGGCAGGGAGGTGGCTAAGTACTGTATGTTTGCGTGATACGTGCCGTGCTCCGTGTAGTTGCCGCTGTCACCACACAAAGGCACCAGCGTCTGCGCATCGGTGAGGGGCGCGTGGAGCAGCAGCAAGGCGAGGCCGGCGGCTGCGGCGGCGAGGTAGTAGCAGGCCATGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0383700.1 | 7 | 21384898 | C | T |
| Osa07LNT0383700.1 | 7 | 21384812 | A | C |
| Osa07LNT0383700.1 | 7 | 21385114 | G | T |
| Osa07LNT0383700.1 | 7 | 21385122 | G | A |
| Osa07LNT0383700.1 | 7 | 21385142 | A | C |
| Osa07LNT0383700.1 | 7 | 21385224 | T | C |
| Osa07LNT0383700.1 | 7 | 21385447 | A | C |
| Osa07LNT0383700.1 | 7 | 21385733 | A | G |
| Osa07LNT0383700.1 | 7 | 21386029 | G | A |
| Osa07LNT0383700.1 | 7 | 21386073 | T | C |
| Osa07LNT0383700.1 | 7 | 21387277 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0383700.1 | osa-miR5544 | Translation | 4.5 | 8.545 | 1 | 22 |
| Osa07LNT0383700.1 | osa-miR5793 | Cleavage | 5.0 | 15.483 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR5804 | Translation | 4.0 | 16.845 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR5833 | Translation | 5.0 | 18.021 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR169e | Cleavage | 5.0 | 24.426 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR1424 | Cleavage | 4.5 | 10.283 | 1 | 19 |
| Osa07LNT0383700.1 | osa-miR1855 | Translation | 3.5 | 18.57 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR3980b-5p | Translation | 5.0 | 22.106 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR5486 | Cleavage | 5.0 | 13.588 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR393b-3p | Cleavage | 5.0 | 14.934 | 1 | 21 |
| Osa07LNT0383700.1 | osa-miR1881 | Cleavage | 4.5 | 16.933 | 1 | 24 |
| Osa07LNT0383700.1 | osa-miR3980a-5p | Translation | 5.0 | 22.106 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0383700.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0383700.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0383700.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0383700.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0383700.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0383700.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0383700.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0383700.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0383700.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0383700.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)