© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0383900.1
CAAAATGACAATATATACAGTTTCAAGTTCCAACTCGAAACAAAAACAAGCAACAAGCCAACTACACTAGCGATGGCAAGCTCTGCTTTAGGCCCTGCTACCTGGGAGACAATTGTGTCACGGTTTGAGAATAACCAGAGCTTCCATCGGAGAAAGATGCTACTGGAATATGAACTACAGGGGCCGGCAGAGTGCTAGTAGCATCGCTATTAAGTAAAACCATGACATCGGCCATTGTTGGACGATCTATAGGGTTCTGCTGGACACACAGGAGACCAATGTTAACACATTTTAGCACCTCGCCTTCAGGGTAGTTTCTTCCCAAGGAGTGATCTATGATCTCCTTAATGTTTCCCTCTGCCCAGTGCCTCCATACTATGCTTATTATATCTTCGTTTGGCTCAAAGAAATAGGGCCCGTTGTTCCTTCTCCGGCCCGTCACGATCTCTATGACGAGAATGCCGAAGCTGAACACATCTGATTTCGTGGAGTACTGCCCATGCGTCACGTACTCAGGAGACATGTACCCAAATGTCCCAACGATGCGGTTTGTAATCTCTCGAGTCTGGTCTTGTCCGAAGAGCCTAGCAAGTCCAAAGTCCCCAATCTTTGGGTTCATGTCTGCGTCTAGCAAGATGTTGCTCGCCTTCATGTCTCGGTGTACGATCTTTTTCTGGGAGTCCTGATGGAGATATTGAAGGCCCCGAGCAATGCCTTCAATGATCCTAAATCGTGTAGTCCAATCTAGCTGTCTCCTTTTCTCTTCATCAAAAAGAAAGGTGTCGAGACTTTTGTTGGGCATGTACTCGTAGACGAGCATCCTCTCTCCCTCTTCTAGGCAAAACCCCACAAGCTGCACAAGATTCTTGTGATGAAGTTTGGCCACCAAAACTAGCTCGTTTTTCACCTCTTCCAACCCTTGGTTTGAACCCTTCGCTAGCCTCTTCACTGCTACGTCTTGTCTGAAAAGAAGCCCCTTATAAACAGCACCGAATCCCCCTTCGCCGAGTTTCATGCTTTCATTGAAATTATCCGTCGCTACTTGCAGTGATGCCAGAGATAGCAGGGTTGACTTGACACTTTCGAAGTCCTCAGCTGCATCAGGTCCGGTGAAATGCTCTGCTTTCCCTCGTCTTCTCTTCTTGCGTATATTCCACAAGAGGATGGAAACTGCAGCTACGATTGCAACTGCCACTATCGGCAAGACGATTTCCAGAATTTTGTTTGCTGAATTATTCTTGACTGCATTTTGGAGGGAAAATAATCAGTTCAAGTATTCAAAACAGAGCACCTGTTTTCTTGTCTGAGCAGCTGATTATTGAGCTACCAGCTGCTCAACGAACAAAATTGACTTTCTCTTCGCAGTGGCGGATCCTTCATGGGTCTATGGGGGTCTCGAGCCCTCCATTACCCGTGTCGTAACCATAGGAGCCCCCACGAAGACCCCACTAAAATTTTTTATCATACATTAATTAGAAGATGGGTTTATAATTTTTGTATAGTTTGTTCAGACCCTCATATTAATTCTTTCTGGATCCGTCTCTGTCTCTTCGTGTGCCAATTTATGATTTTTCTAAGACTCAATGAAAACAATGAGCTATGAAGATAGTCATCGTTAATTGACATACTACTAATATATATACGTGACATGATGTAATACAGCATTTGCCATGCTAAACTATGGGTCTTGACTGTCTGCGCGGTGATTATCTGACATAACACCAAGAATGTGACGAGTAACAAAAGTCAGACTTATCAGTTCAAAAGTAATCCGGTATAACATAAACAATGCAGAAATCCATGAACCATAAAAAAGTATAATGACTTATATTTTCTCATATTTGCAGTAAATTTGAACCCAGCAAATTTTCAAATATCATGTTTAAAAATTAACGATATCTTATATTTAAAAATGGAGGGAGTATATGTTATCGAAATGACGCGGTATTGTCACCTCCCGTAGTGCCCGGCGCAGCATCCGGCGACGCCGCCGCCGCCGCCGGCGAGAGGCCGTCGGCCCACAGCTTCAGCATCGGGGCTCCGGTGTAGAACTTGTCCTGGGATACCTCCGACCTCAAGCTGCACCTCGTGCCGACGATCCTCGCCCCCACCGTGGTCCGCGGGAACGTCTTCCACCACCTGGCGACGAGGTCCTCGAGGCAGCTCCGGCACAGCGCCGGCGACAGGTCCGGCGTGCACTGCGCCGCCGAGTAGATGTTCGGGAACCCCGGGTCGGCGCCCACCCGCTGCCCCGTGGCGAACAGCCTCGTGGTGTTCACTACCGCGTACATCAGGGTGGCGCTGAGGAGTTCCGTGACGGCGCGGTCGTAGCCGGCGACGTCGGCGGTGGTGACGTTGTCGCTGTTCATGAGCGGCGCCTGGCCGGAGTTGTTGGCGGAGGCGAGGAAGTCGCCGGCCGCCGAGAAGCGGGTGTAGCACTGGTTGTAGACGAGGATGGCGTCCCTGGTGCGGTTGCACGCCGGGGCGACGTCCTGGCCGGCCCTGGTGCCGCAGTCGTAGCAGTCGGAGGAGCTCACGTCGCCGCGGCAGAGGATGAGGCCGTAGACGGCGTCCGGGGCGGCGCCGAGCGCGCCGGCGGCGAAGAGAGTGGGCGACGTGGAGGCGTTCTGCTGGAGGGCGGCGATGAGGCTCTGGAGGTTGGTGTCGTAGGTGCTGTTCGCCGTGTACGTGCCGCCGCCGCCGCCTCCGCGGCGGCCGCAGAGCTGCCACGGCTGGCCGGCGGCGAGCGGGAGCGCGGCGGCCGCGAAGAGGAGAACGGCGAACGTGGAGCGCCGCCGCATGGCGCCCGTGGACGCAGCTGTCACAGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0383900.1 | 7 | 21408172 | T | A |
| Osa07LNT0383900.1 | 7 | 21409616 | T | C |
| Osa07LNT0383900.1 | 7 | 21408007 | C | A |
| Osa07LNT0383900.1 | 7 | 21408040 | T | C |
| Osa07LNT0383900.1 | 7 | 21408109 | G | A |
| Osa07LNT0383900.1 | 7 | 21408560 | T | G |
| Osa07LNT0383900.1 | 7 | 21408782 | A | G |
| Osa07LNT0383900.1 | 7 | 21409085 | A | G |
| Osa07LNT0383900.1 | 7 | 21409183 | T | C |
| Osa07LNT0383900.1 | 7 | 21409419 | C | T |
| Osa07LNT0383900.1 | 7 | 21409575 | A | T |
| Osa07LNT0383900.1 | 7 | 21409655 | T | A |
| Osa07LNT0383900.1 | 7 | 21409669 | A | G |
| Osa07LNT0383900.1 | 7 | 21409737 | A | G |
| Osa07LNT0383900.1 | 7 | 21410220 | A | G |
| Osa07LNT0383900.1 | 7 | 21410255 | T | C |
| Osa07LNT0383900.1 | 7 | 21410264 | T | C |
| Osa07LNT0383900.1 | 7 | 21410281 | T | C |
| Osa07LNT0383900.1 | 7 | 21410297 | A | G |
| Osa07LNT0383900.1 | 7 | 21410300 | A | G |
| Osa07LNT0383900.1 | 7 | 21410302 | T | C |
| Osa07LNT0383900.1 | 7 | 21410375 | T | C |
| Osa07LNT0383900.1 | 7 | 21410400 | C | T |
| Osa07LNT0383900.1 | 7 | 21410564 | G | A |
| Osa07LNT0383900.1 | 7 | 21410829 | T | C |
| Osa07LNT0383900.1 | 7 | 21410969 | A | C |
| Osa07LNT0383900.1 | 7 | 21409635 | G | A |
| Osa07LNT0383900.1 | 7 | 21411039 | T | C |
| Osa07LNT0383900.1 | 7 | 21410233 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0383900.1 | osa-miR5798 | Translation | 5.0 | 18.51 | 1 | 21 |
| Osa07LNT0383900.1 | osa-miR5820 | Translation | 4.5 | 14.349 | 1 | 21 |
| Osa07LNT0383900.1 | osa-miR6253 | Translation | 3.5 | 13.581 | 1 | 22 |
| Osa07LNT0383900.1 | osa-miR394 | Cleavage | 4.5 | 22.286 | 1 | 20 |
| Osa07LNT0383900.1 | osa-miR168b | Cleavage | 4.0 | 16.824 | 1 | 21 |
| Osa07LNT0383900.1 | osa-miR2093-3p | Translation | 3.0 | 12.19 | 1 | 20 |
| Osa07LNT0383900.1 | osa-miR5080 | Translation | 5.0 | 18.847 | 1 | 21 |
| Osa07LNT0383900.1 | osa-miR5488 | Translation | 4.5 | 18.768 | 1 | 21 |
| Osa07LNT0383900.1 | osa-miR5517 | Translation | 4.5 | 13.007 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0383900.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0383900.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0383900.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0383900.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0383900.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0383900.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0383900.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0383900.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0383900.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)