© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0384100.1
TGCAAGTGTCATCATAATTCATAGTACCGAGTAATATGCTCCTGAAGTCCAAATGCTATTTTTACAAAATAACCAACGTATCCATAGTTGGTATCTTAGACAAAAGAAACAGTAGAAGCACATCACTAGTTATTATGTTGGAAATCTACTACCCCAGTCCCCAGGTAATCCAATGGAACTCCTGCTTGAGATTGCTGTTATGCACAATAAAATTCTGCTGAAAAATTCCAACTTGTTGGCCTACAGTACTTCAAAAGGTGCATACGAAAAGCCTGCCTAAGCACTCCCTGGTAATATATAGAAAAAAGATGACCATGATCAACTCACTGCAGGGAGCTGTATCGAAGAGCTAACTTTAACAAATTAGCAACTTCCAGTCTAGATTGAGGACTTCTGTTGAAAACCTAGGATTTGTTGGGAGCAACTTTAAAATGTCTTTCTGAAAATGTAGCAATTTATGCTGACAGCTGTTTGGTGGTAGTTAAAGCCAGATAGCCTTGACCTTCACTGACTTTTCCACACTAGGATTAATTGTTTTACTGGTTGCCAAATGGACCAAATCGCTGCCAAATATGCTCCATTAAGTCCCTTCTAAGTCGTGTATGTTTCGGTGGAGCACAAACAGAAGCATTTCTATGTAGCACTTCAGTAAAAGAATCAGCAGGCACAGTGTTGATGTCTGATAAAATAACAGCCAATGTCCCTGAAATTTCATCTGGGTCAAAACAAGCGCTGGCCATATCTTTCTCATCCTCAATTGTCATGTTGTGAAGTATAATGCAGGCTTGCATGATTTTTGCAAGAATCTCTTGTTGAAAGAAACGAGTTGGACCACGCACAATGGCAAAACGAGACTGTAGAAGTCGAAATGCTTCTTGGACGTCCTTCCTTGCTCCTTCTTGATGCCGTGCAAATATTCGATCCTTTTCGCTCTGAGGGAGGGATACTGTTTTAATGAAGACATTGCCTTCTGGGTATGTTCCATCAGCAAGATAGTAACCCGTATTGTATTGCTTCCCATTGACAGAGAATTGCACCTGAGTAACTTGGCCTTTCAACACCTCGGTAAACAACTGTTGTTGACTGATAATTTTCATCTCATTGTTGGACCCAATGACAGCAAAGAAAGCATGCCATATCCAGTGGTCATGTGAAGCAACCGCTTCAAGAATCATCGTAGCAGCACCATGATCGGTATGAGTAAGGTGACGTTTCCATTTAACTGGGCAATTTTTCCACTCCCAACGCATACAACCAGTACTTCCTAACATGCCAGGGAACCCCCGTGCCTCATTCACTTGTAGTATATGTTGCATATCCTCACTAGTGGGGCTTCGCAAATATTCTTCACCAAAATTGTCGATCACCCCTTCCACAAACCGCTCCAAACACTCTAGCTCTGTGCTCTTACCAATTTCTACGTATTTTTCATTGGCATCACCAAGGGAACCACATGCTAATATACGAATGGCTGCTGTGCATTTTTGCAAAGGTGAGAGTCCTTGACGACTGGAGGCATCTCTCCTGTTGGTGAAATAGGGAGACCATTCACCTAAGGCATGGACGATACGCAGAAAAATGGGTTTTCTCATCCGGTACCTTGCACGAAACTGTTTATCACTATAGATTGGATCTTGAGAGAAGTAATCTTTCACAAGTCGTTGATGGCCCCCTTCATGATTCCTGTTTAAAGATTTCCGTTCACCCCTTGGATGGTGAGATGTACCAGCCTTCTGAGCTTCAATCTTGGACTGAATTTTCACAGTGATCCGTTCAAGCAAATTGTCCATGATGCTTTGCTCAGAAATGAATTCTTCTATAGTGTATATGCTGGCTGGGTCGATGATGTTATCTTCAGAATCATCTGAACATGAAGGTGTGTCTGATTGCTGGGACATACCTCCTCCGTGCGACCGTGCGGGAGGGAGAGGGATCAATTGATCGGTGAAGGCCACTGTGGGGGGAAACCGTAGGTTTGAGGGCACAGTCACACAGGAGGTCTCGGCGTCTGTTCACGGCGAGGAGGGCAATCGGCGGAGGACGCGCGCTCGACGACTGACGGAGGAGATAGGGACATAGGGTTTGGCGTTGTTGTCGGTGCAGGAGGCGGCGACGGCGGCGCAACGCTAATACCAGAGGAACCGTACACAGGGCGGAAGGAAGGAGGAGGAGGAAATGGGCGGCGGCGGCGACGGTGGCCGCTGCGAAATCGGCCGGCGGCGAGCTAGGTCCGGCGGCCGCCAACGCGATGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0384100.1 | 7 | 21675023 | T | C |
| Osa07LNT0384100.1 | 7 | 21675340 | T | C |
| Osa07LNT0384100.1 | 7 | 21675684 | G | A |
| Osa07LNT0384100.1 | 7 | 21676599 | C | G |
| Osa07LNT0384100.1 | 7 | 21676800 | A | T |
| Osa07LNT0384100.1 | 7 | 21676808 | A | G |
| Osa07LNT0384100.1 | 7 | 21676881 | T | G |
| Osa07LNT0384100.1 | 7 | 21677414 | A | G |
| Osa07LNT0384100.1 | 7 | 21677699 | A | T |
| Osa07LNT0384100.1 | 7 | 21677912 | G | A |
| Osa07LNT0384100.1 | 7 | 21676624 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0384100.1 | osa-miR5542 | Translation | 4.0 | 11.309 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR6255 | Translation | 4.0 | 12.104 | 1 | 22 |
| Osa07LNT0384100.1 | osa-miR6256 | Translation | 5.0 | 10.636 | 1 | 22 |
| Osa07LNT0384100.1 | osa-miR1437b-5p | Translation | 4.5 | 11.731 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR1851 | Translation | 4.5 | 17.097 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR1866-3p | Translation | 5.0 | 18.28 | 1 | 22 |
| Osa07LNT0384100.1 | osa-miR2863b | Cleavage | 4.0 | 18.149 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR2871a-3p | Cleavage | 4.5 | 16.811 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR2871b | Cleavage | 4.5 | 16.811 | 1 | 21 |
| Osa07LNT0384100.1 | osa-miR2875 | Translation | 4.0 | 15.39 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0384100.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0384100.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0384100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0384100.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0384100.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0384100.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0384100.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0384100.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0384100.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)