© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0384500.1
GATGACATTTCATTTGATTCATGTCAATTTGTCCCTGAAAGTTGGAAGTTGAAACACTATGTAACAGCCAGAAAAATTTACACTTGGATTCATCATAAGCCTTGAGCATCATGATATAATATAGATACCGACTTGAGACTAAATAAAACCAAATACACGATGAGAACTATCACCTAAGTTTACAACAACCCAGTTGCACTTGCACCTATCACCCACATATGGTTGCTGCCAGCGCCAATACAAATTTTCAGGCTTGATACAACAAACAGGCCTGTAATTGCAGTACAGATTATTTTCTTGCCGGACAGTCCACCAATTCTCTTGAGAATTTTCACCATTTCAATTCGAATTTGTGCAAAAGGGTATATGCAATACAACTGCCAACTGCTATTATCCTACTGCTCTGGTAGATCTGATGGGACGAGTGGTTCATGCTCATTAGCACCATTTGATGTTCTGTCCATGCCACACACCTCAGGAGATTTTATAGGCACAAAAGAGGACTTGTGTAGAGCAGCAAAAGCCTTATTTCCTTCACCGTTGCTTCCTAAACAAATGGTATCACCCCGCCCATGCCAGACACCGCACTGGACATTATTTATCTCCAACGTCCGAGCCTCCTGGCATAGCGTACAGCAAGGACAAATGAGATGGAGAACACAGTCATCTAGACTGCTATCAGTGCCCCTGATATTGAACTGCTTCCTGATTCTTCTTCGGAAGTAACCAGTATAGATTGCTATCAAGAGAACAGAGCTAAGTCCCATATACAAATATATATTATGCCTTGTGACAGAAAAGGCGATTAGGCTAACCAGAATAGCCACTAAAGAAATTAAGTAAACCATGGCCTGAAGGAAGCAAGATCCAAGATTGGCTCTCCGCATGTTCTTGCCGAACCTGTAGCATGGGCAGCACGCGGCCTCGAGCGCGATTCGCCTGTCCTCCAAGCAATCCAGCACCACGTCCCCTTCCCACATCCTCTGCACCCCTCCTCCTCCTCCTCCGCCTCCTCCACCACCGGCCTCCACCGTGGCCGCCGCCGCCGCGGCCGAATCCTTCCTCCTCTCCGCCGCCAGCGCCACCGAGGCGCACAGCATGTCGAAGTCCAGCACCGCCATCACCTCCTCCTCCTCCCCCTCGCTCTCCTGCCGGCTCCTCGCCGCCGTCGACGCCTCCTCCTCCTCCCGCGCCGCCGCGGCCATTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCTTTCTCTCTCTAAAGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0384500.1 | 7 | 22057387 | T | C |
| Osa07LNT0384500.1 | 7 | 22058057 | A | T |
| Osa07LNT0384500.1 | 7 | 22058771 | C | T |
| Osa07LNT0384500.1 | 7 | 22058870 | A | G |
| Osa07LNT0384500.1 | 7 | 22058917 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0384500.1 | osa-miR5079b | Cleavage | 4.5 | 9.533 | 1 | 22 |
| Osa07LNT0384500.1 | osa-miR160d-3p | Cleavage | 4.5 | 16.903 | 1 | 21 |
| Osa07LNT0384500.1 | osa-miR394 | Cleavage | 4.0 | 21.051 | 1 | 20 |
| Osa07LNT0384500.1 | osa-miR444b.1 | Cleavage | 5.0 | 19.706 | 1 | 21 |
| Osa07LNT0384500.1 | osa-miR444c.1 | Cleavage | 5.0 | 19.706 | 1 | 21 |
| Osa07LNT0384500.1 | osa-miR1847.1 | Cleavage | 4.5 | 15.912 | 1 | 21 |
| Osa07LNT0384500.1 | osa-miR2919 | Cleavage | 3.5 | 1.622 | 1 | 19 |
| Osa07LNT0384500.1 | osa-miR5079a | Cleavage | 4.5 | 9.533 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0384500.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0384500.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0384500.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0384500.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0384500.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0384500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0384500.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0384500.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0384500.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)