© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0384700.1
GTTCTCGAGTAGATCAGTAGCTCTTATTAATGCTTAAGAAAAAAAAAGTCAATATAGATTACAACAAGAATCCAACTACAGGCCATCTACTGAAATTCGTAGCTGGAGGACGTGTCAATGGAGAGCAAGATCTTCAGGATGTAAGCAAGCAGTAAAGTGCGTGCTGATCATGGAATTTGTTGGGCTAATCATGATTAGAAGCTGCCAATTCTTGCATTAGGACATGAAGGTCGTTATCTTGAAATGGAGCCAAAGAGGCAAAGATGCAGACCTTTTGGGTGTCCTTTTCTTCGGCTTGAATTGGTGGCCAAACCGAAAGCATCCTGATTCACTGCATGGTGCACTGCTGTCAGATTGGTCCAAGTTTTCTCCTCCTCACAAGCTTCAGGTGTGTGTGGATGCTATGCAACCATGCAAACTTTCAGGATTATGCAACAGATTCACACATTGTGAAGGCAAAAGATTGTATAATTCTGCAAGCAATTTGGTGTTGGATGACTTAGACCAGCAACATATTTGCATGTATCTTCAGGTAATCAGGTACTATTGTTCATTGGGGAACAATGCCTTCTGTCATGTATATCTGTTGTGTTGTATGTTGTAATGATACTGGAAGTAATCTGAACATGTTTGCAAGGTTTCTCTCCCGAACGAGAGACCAAATACATTTTGATGGTTGATGAGGTAAAATGTTAACAAAAGAAAAATCTGTGTTATGTGCGCAGTTATGCAAAATTTGCCGCTACTTGTGATTTGCTGAGATCATTTCAACCAGCTTGCCGTGCAGAGCACCGTTGGTGACGAGAACACCACCTGAAGGGTAAATGTCTCTGCGCCCAGTTAGGTCAGCTGCAAGATCCAACGGTTTCCCACTCCAGTCACTAATCTGACCTCCAGCTTCCTGTACACAAATTACTCCGACAGCATGATCCCAAGACTTGAGATTTTTCGTCCGTGCTCGAAGTACAAAAACGGAGGCTCTCCCAGAAGCTACAGTTAGGTACTTGCACAAGCTGCCACAGTAAACAGATAAGAGGAGAATTTCATTCTCATCTCTAGGATTGGATTCATCCATTGTTGAGTTGAAGAGAACAGATAGCGGTATCATATTCCAGGTTTGGCTATCAGGAATGCAAAAGCGTGCCATGTTCACAACTGAACAAGAATCCACTAAGCATCTATTCCAAGTACTCTGTGCCGTAGTGAACTGGCCAATATCGACAGACAAATGCCTAGACCAAGTTCCACAGCCCACATGAGCAATCATAAGGATCCCATGATCAGGTTGGGCAGCAGCGCTGTCTTCTTTTCTGCTGGCTATGGTAGCATTAGACCAATTAGGACATCCCATCACTCCTGCTACTACCTTTTCATTTACCACAAGAGCCAGCCCCACCACATACAGAGCATCGTCCCCTCCCAAGAAACCTTTTGTGCCATCAATTGGATCAAGTACCCAATAACTAGCAGGATTTGAATCAAAGGATACAGCATTCTTGCCTCCTCTATCAATAGCTCTCAGCACATCATCATGAGTTAAAAGTGAATTGGCGTTACTCACTTTTTCTGCAACAGCACTTGAAATTGACTCAACAAGAACATTACTACTGTTATCATCAGTATTGGATGACCTCAGAGAAGCTGAATCCTCTTCTGCCACCAGAGGTATTGACGGAAACAATCGCTGGAGCTCTAAACTAATAAGAGCTTGTACTCCAAAATCTGCAACTGTGACAGGAGTTTGGTCATTCTTTTCAAGAATCTTCTTGTCACCCGAAAGCAGCGTTCTCTTCACGTCTACGCAGAGGCGGCAGGCGCGCTCGACGGCCGCGGCGGCCGCCGCGAGCTCCCGGTGGTGGGCGGCGCGCTCAGGAGGGAAGGGTAGCCCGTACGCCTCCGCCGCGGCCGCGGCCGCCGACGCCGCCGCCCTATCCAGAATACAAACACATGAGCCACTTAGGGCGGCGGCGGCGGCGGCTGTCGGAACTCAAACGAGCGGAGAATACGGTTAGGGTATCCAGGAGAGGGATCACCTGACGCGGACGAGGGAGCGGCGGCGAGCCGCCGGGAGGAGTAGGCGGCGGCGGCCGCCGCCGGCGAGGAGGAGGCGGTGCGGCGGCGGCGAGAGGTGGAGGAGCGGCATTCGCGCGTGTGGCGGGAGCGAGACGGCCCAATGCTGTCACCGGAATATTCGCAGGTATATTCGCGAATACGCCTCACGACGCGAGTATACCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0384700.1 | 7 | 22305486 | T | A |
| Osa07LNT0384700.1 | 7 | 22303867 | G | A |
| Osa07LNT0384700.1 | 7 | 22304034 | G | A |
| Osa07LNT0384700.1 | 7 | 22305329 | A | T |
| Osa07LNT0384700.1 | 7 | 22304264 | A | T |
| Osa07LNT0384700.1 | 7 | 22306116 | A | G |
| Osa07LNT0384700.1 | 7 | 22306389 | A | T |
| Osa07LNT0384700.1 | 7 | 22306457 | G | T |
| Osa07LNT0384700.1 | 7 | 22306807 | T | C |
| Osa07LNT0384700.1 | 7 | 22307269 | T | C |
| Osa07LNT0384700.1 | 7 | 22307478 | G | T |
| Osa07LNT0384700.1 | 7 | 22307819 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0384700.1 | osa-miR5530 | Translation | 4.0 | 16.011 | 1 | 21 |
| Osa07LNT0384700.1 | osa-miR5831 | Cleavage | 4.0 | 22.38 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882a | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882a | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882b | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882b | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882c | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882c | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882d | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882d | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882e-5p | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882e-5p | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882f | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882f | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882g | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882g | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882h | Cleavage | 3.5 | 13.453 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR1882h | Translation | 4.5 | 22.981 | 1 | 24 |
| Osa07LNT0384700.1 | osa-miR5517 | Translation | 4.5 | 15.386 | 1 | 21 |
| Osa07LNT0384700.1 | osa-miR435 | Cleavage | 5.0 | 13.189 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0384700.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0384700.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0384700.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0384700.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0384700.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0384700.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0384700.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0384700.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0384700.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)