© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0384800.1
GAGTAAAAACGCCTTGCAAATTCGATGATTTCCTTGCTGTACACATATTACAGAGCTGGTGTTGCATTATCTCTATTCGCTCATGGCGGATAATCTGTATTTAATTACCCTTCCATATCTCAGGTTCATCTCTCTACATACAAGATGGCATACATACACTGACAACAAAGAACTAATATACATGTACAGACTTCTTGCTTTCACCTATATAAATCTTTTCTCTGATAAGCTGGACACCGGACGATCGAGTGCCAGCACCACCGCCATTGATGATGGAGCTCATCATCGTCATCAACAACATCACCATCATCTCGTCAGGCTTGCGATGAAGAGGAGAGAACCTCGAAGCCTTGTTTTTCACCTCCCAGTCTCTTCCATTGTCTCTTCTTGGATGCAGTAGCAGGGAATGTAGGGAAATGCACTTGGATTCAGATTGAATGCATTCACTTTGAGCTCTTCTTCCCCCACCATCTTTTCCGGGATTTCTCCTCACCAACCTTCTGAAGATTTACCTTGGTCTCCTTCAACCGAGACTTGTAGTCTTTCTTCCATGTCGCGAATCGGTCCTTGAGCTTTCGGAGTTCATCGTCTGGGTTCATGTTTGAACCAACTTGTCCGGACTTCACGGCAACAAGGAAGCCAGCATCGTCTTCAAACACCTGCCGCCTGTCCTCAAACTCCTTGGCTAGGTGGTTCACCGCGTTTATCCGCCTATCTGAATTCGGTGCTGCCACTCTAGCCTCAGAGTTGTGGTTTTGATATTTGAACTCTGTCCCTTCAGGGGTATGGGTCCCGGTCGACGTATCTTCAGAATCATAATGAGCATGCATTGGAGCAGCGTCGGTTCGAGCTGCTCGGCTGGCCACATCTTCTGCAGTTAGGCTCTTCTTGGCAGCCACAAGGCTCAACTGCAGAGAGGAGAGCTGCTTCTTCCATGCCTCTTCCATAGATTTCATTTTGGCCTCATATTCTGACCATTTCTTCTCATATTGATCCAATTGTTGCTTTAGCATTTCGTTTTCTTCCTCCTTATCTCGCAATGCAGCCTCAGCTTTTGAAACACGTCCCTGGAGTTCCGTGATAACTGGTTGCCGAGGATAATCTCCATTCGTTTCATGATACATCCGCGCTTGTGAAACATTATTCCTTACATGTATAACTTTTCTGTGACTAGCCTTTGAGTCCTTCTCTTCCTTCAGGCACTTATATTTCTTCCTGGCCAAGCACCCACGCATCACTGATTGTAGAAGAACAACATATTTGAGCTGATCAATAAACATGGTAGCTGCAATTCGACGCCTAGCATACTTCTGTATGAGAACAGATGCCTTCCATCTCTTTACAAGATGATCAAAGTGAACTCTTGCCTTTTCACCTCTTATAAATGATTGCAAAGTCATTGCTCCTTTCTTCAGTCCCTGGTATTCTTGTCTAGTACACAACCCACGGAAGTTCTTCTGAATCCGAAGGGCTCCATGGAGCATCCGATTCTTAGCATTTTCCAGTGCAGCAACCTGTCCTGTACGAAGAAACAATTTTGTATAGCCAACTTGATACATTTCTGGTGGAATATTGAACTGTTGTAATACAGCAACCGAAATACTAAGAGGATCCTGCGATGCAATGGAACGCAGGAGAAGACACCCATATCTTTCAGCAAACTGTTGGTGAGTCATCCTAGTTGGATAGCCTGCTCTTGATATCCGCACAACTTCGAGCACCCCACAACACTTAAGCTGGTGTGAAACAAGATCATGCTCAAATAGCATGGGACGTTGTTTGCTATTTGGCTGGATGCATCGAATGAAATGAGGAGTTGTGTTCTCCAATTGCTGCATCAGCTTGAACAGTTGAGCCTTAAATTTGGTCACGACACTTTGCTTTTGTGAATCAACAGCTGAGTGCCATGACAAGGTTGATTTATTCTGAGAATCAGCAACCATGACAGAGGCAAAGTATTTTGGGAGTTCAGATTTACATGATGAGAGTAGTTGAATTAACTCAGAGTTCAACGGATCTCTGTTCTTCTCCAAGAAACCAGTTGTATCATACGTCACCTCTCCAGCATAATGGCAAATCTTAAAAGCACCTTCTTGTTCACCCCTGAAGGCAGAGTTTCCCCTCAAGTGCTGCTTAAGCTTGTTAGCAAAAGAAAAGTCTGTTGCCTTTGGGAATGTAGACTCTTCATCCAGTAATGATAATAGCCCTAGAGGTTTCTTCTCAAAGAGAGTTAAGCAGTCAGCATTATCCACAAATTCCACATTTGCCCAGTCAATTCCATCCTCTAAGTATTCCTCCTGTTCTAGCTTGAAAAGATGTCGATTGAAGTGCTGTTGTAGCCTTTCGTTGGCATAGTTTATACAAAATTGCTCAAAACCATTCTTAATGAAAGACTCGAACCCATAAATATCTAAAATACTTATGGATCTCCATGTGTGTTCTCTTCCAGTTCCAAGTGAGTGGTTAATTTGCTCAACAACCCAGTCAAACAAATGGGCGTAAATGGACTTTGCTAGAGCATCCCTTGCATCAATAGCCTAGAGAAAGTAGAAAACATACAGTAGAAACACGATGGAAAATATAATAAGGCGCGACCTATGATCCATGCTGCTAAATTTGCCAGGTAACTTACCTGAGTTAATGTCAGCTTTTGAATAATATTGTCCTTTCCAGCTTGGATTTTACGTGTAGTGAGGGCATTCATCAATTGAGGAGCGCTGCAACCTAACAGCTTGGCTGCAGTAGCCAACCCTTCATTTGAAACAATCTCCACATGATTTTCATTGTCTATCACAGAGAATGAAATGTTTCCAAGCCACAAGACAGCTGCGAGCATGGAAAACAATTTCATTTGGTCTTCTTTAGATATTTGAATAATATCGAGTGCATCCACTAGCATTGAAAATCTTTTAGCATCATCAACACCATCAATTCTCAAGCAAGCACTCTGCTTTAAGTAATTGTAGTAATCGGCTTCTTTCAAAAACAGTTTTTTCTTTAAAAGGGGATTAGCTCCAGAGCACAGTTGATAGAAAATATGGAATGACCTCTCCCCTGTTGCTCTTCGAACCACCCTCGACTTCTCTAACAGGAATGTTTGAATTTTAGCACCAGACAGCTTTCCAGTTTCAGAGAAGTGTATTTCAGTAAGTTTACCAAATCGACTAGAGTTATCATTTCTTGATGTTTTTGCATTCCCTAATGCTTCCAGAATAGCATTTGTCTGAAGAACCTCAGACTCCATTCCTCTGGCATCCCCTAGAGTGGCCAAATATTGCATTGCAATTTTAGCTGTCTCAGTCTTTCCTGCTCCACTTTCGCCACTTATTATTATAGATTGGTTTACGCCATCTCTTCGCATTTCATTAAAAGCCAAGTCAGCTATTGCATACACATGTGGATCATCATTGAGCTTTTTCCTGTATTGCGAGATGAAATCTTTCCCATAGAGAGCAACTTCTTTTAATGGATTAACAGCAACCAGAACAGGCCCTGCTTTTGTATAAATAAGATCACGAGAATATCTGGACTGCAGATCGTAAAGAACTGAGGGTTCATTTAAATAGCTGAGATGGATTAAATTATCCACTCCATCAAGAATATCAGGGTTCGCCGGCAAGAGTCTGTCTGGTGACAGTGTCAAAACCTCTCCATTAACCAGGAGTATTTCAACATCATCTCCAGAAACTGATTGAATCTGTCCAAGTTTCCATGTTGCATCTGGTGAAGAACACCAAACTCGGAGCTTCTTCTGGAGGACATAATCCATGGTATCAGTGAACACCGGCTTCCCATTTGTCTTTGTCCTTGGAGAAACAGAAGGGAGCTCCTTAGAGACCATCATCTCCTTCCTTTCCTTGTGAATGTTATCAGCATACGGCGACTCCTCAAGAACCTCCCCATTAGAGAACTTCCTCTTGGCCCCAAATATGCGAGTTTTTACCACATTCTCCTCCTTGGCCTCCTGAACACAAATCTTCATCTCAACCCCTGGCTTCTTGTCAGCCATCACCATATCCGCCACAGCGCCTTCTGCCGCGCCATTCTCAAGATTAACCCCAGCCATCACCGTATCCGCCACAGCGCCTTTTGCCGCGCCATTCTCAAGCTTAACCCCAGAAGGCAGTGATGGCCGTCTTGCACTGGGCAAGCGGCCGCGGCACGTCGGCCGCGCTGGCAATGCCGGAGGCGCATCCTTGGGCTGCTCATCGCGCTTCTTTATCGTCTCCAGCAAGACCTCCAGGGAGCTCTTCGCCGCGGCCGGGGCTGGCGCCATCACGGCGGCTGCAGAGAGCATCACCGCCGTGGGAAATCACACAAAAGCCACCAGATCAGACCAGTGACCTACACGCAGGCTCACACACCAATCCGCCAAATCCTGCCGCGGGGCACCATGGCAACCAAAACCTTCTCCATCTCGCACCAATATTATCTCCAAATTTAGGTGCACACGCCCCTAACTCAAAAGCAAAGGGCTCGAAAGTGACAGCCCTCCCAAACCCCCAAATTCTGCCGCCAAGGGCTCAAAATCCCCTCAACAATCTCTCAAATTCCCACTCCCCCAGCACCGAATTAGCACTCAATTGCACGCACCAAGAACAGATTTCGGCGGTGCACGAATCCAAGGGACGGGGGGGTAAAAACCCAAACTCCGCGCGATTTTTGAAGGGGGGAAAAGAACCGGGGGCCAAGCTTGGAATCGGCAAGGGGCGACTGCAAAAGCTGGCGAAAGAAAAGGGGCAAAAGAAACCCGAAACAAAAAAAGCAAAGCCTCCCGAATCAAAGGGTCGCAACACTAAGCAGCAGCAGCAGGAGCAGCAAGAAGAAGATGCGCAGAAATCATCAAAAGAACTAGAAATAAAACGGGATTTATTTTCCCCCCCAACCCAACGGCAAGAACAGCCAAACCGAAACAAATCAAAACCCAAACAGAAAAACAACCAAAAATAAAACGCGATTTTTTTTCCTCCTTCTCTCGGGGGCTTTTGCTTCAACCTCACAATTCAAACCTCCCCAACCCCCCACATTTCTCTGTCTTTTTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0384800.1 | 7 | 22488978 | C | T |
| Osa07LNT0384800.1 | 7 | 22489076 | C | G |
| Osa07LNT0384800.1 | 7 | 22489383 | A | G |
| Osa07LNT0384800.1 | 7 | 22489866 | G | A |
| Osa07LNT0384800.1 | 7 | 22490087 | G | A |
| Osa07LNT0384800.1 | 7 | 22491369 | A | G |
| Osa07LNT0384800.1 | 7 | 22491904 | G | T |
| Osa07LNT0384800.1 | 7 | 22493080 | A | T |
| Osa07LNT0384800.1 | 7 | 22493672 | C | A |
| Osa07LNT0384800.1 | 7 | 22488951 | A | G |
| Osa07LNT0384800.1 | 7 | 22493752 | A | C |
| Osa07LNT0384800.1 | 7 | 22494276 | A | T |
| Osa07LNT0384800.1 | 7 | 22494966 | A | G |
| Osa07LNT0384800.1 | 7 | 22495347 | A | C |
| Osa07LNT0384800.1 | 7 | 22495731 | A | T |
| Osa07LNT0384800.1 | 7 | 22496376 | T | C |
| Osa07LNT0384800.1 | 7 | 22496451 | T | C |
| Osa07LNT0384800.1 | 7 | 22496704 | G | A |
| Osa07LNT0384800.1 | 7 | 22496815 | T | G |
| Osa07LNT0384800.1 | 7 | 22497423 | T | C |
| Osa07LNT0384800.1 | 7 | 22497679 | A | G |
| Osa07LNT0384800.1 | 7 | 22498428 | G | C |
| Osa07LNT0384800.1 | 7 | 22492261 | A | C |
| Osa07LNT0384800.1 | 7 | 22492865 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0384800.1 | osa-miR5791 | Translation | 4.5 | 18.159 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR5516b | Cleavage | 4.0 | 16.444 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR6253 | Cleavage | 4.0 | 5.716 | 1 | 22 |
| Osa07LNT0384800.1 | osa-miR6256 | Cleavage | 5.0 | 24.305 | 1 | 22 |
| Osa07LNT0384800.1 | osa-miR166a-5p | Cleavage | 4.0 | 19.399 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR166c-5p | Cleavage | 4.0 | 19.399 | 1 | 20 |
| Osa07LNT0384800.1 | osa-miR166e-5p | Cleavage | 4.0 | 19.399 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR167h-3p | Cleavage | 5.0 | 17.612 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR528-5p | Cleavage | 4.0 | 23.201 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR1426 | Cleavage | 4.5 | 17.595 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR1430 | Translation | 5.0 | 24.945 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR1853-5p | Cleavage | 5.0 | 15.684 | 1 | 24 |
| Osa07LNT0384800.1 | osa-miR1319a | Cleavage | 4.5 | 14.142 | 1 | 24 |
| Osa07LNT0384800.1 | osa-miR1320-3p | Cleavage | 5.0 | 15.198 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR2093-5p | Cleavage | 4.5 | 21.091 | 1 | 20 |
| Osa07LNT0384800.1 | osa-miR2101-5p | Translation | 4.0 | 16.466 | 1 | 22 |
| Osa07LNT0384800.1 | osa-miR2863a | Translation | 4.5 | 21.371 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR5340 | Translation | 4.0 | 13.485 | 1 | 23 |
| Osa07LNT0384800.1 | osa-miR5499 | Cleavage | 5.0 | 13.255 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR2275c | Cleavage | 4.0 | 19.485 | 1 | 23 |
| Osa07LNT0384800.1 | osa-miR5516a | Cleavage | 4.0 | 16.444 | 1 | 21 |
| Osa07LNT0384800.1 | osa-miR2873b | Cleavage | 4.0 | 6.897 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0384800.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0384800.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0384800.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0384800.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0384800.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0384800.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0384800.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0384800.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0384800.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)