© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0384900.1
GACAACAATGATGACACAACTTTTATTGAATGCACCAACCTAGATGCTCTACCAAGAGTAATCTAGTATTGCCGTATAACAACACGCCTCGAGTACAATATCCTGAACAATGTATACATAGCACTAGCCAATGCTATTCCCTCGCCTCAATCCTCTACTTGTGTATAGAAGCATAGTTCCAGTCCCCGCATAGATAAATAATAATACATAGAACGAAAGTGGCAAGGAAAAATTTCATGCGCAACATGCAAAGCTAATTTTCTTGCGTACTTAGAACACCTGCAAAAACCTTAAGCTTGTCAATTTACAGCCTACCGAGCTCAGATGTGTGCCTTTAAGGGCGTTAAGCTTCTTTCTGACGCTCCATGTTTGCACAAAAATGCTAATACTGAATATACTCCAACAAGAGAAGATATATGCAACGGAAGGAGGTACAATCACAACTCAGGGCATGAGTGGGGTAAGTTGTTTGCTGAAAAGGTCACCAAGGGCACCACGAACATCCATCTGATCACAGCAGATAAGTTTTGTAATTAATGGATAGAACTCTCTGATGTGCTTCTTGAATATCTGAGCGTCCATGATACACATTCCATTCAAAACCTTGACAATAACTGGTGCTCTTAGGTCCAGTACACGGTGTATGTCTGCACTTGCAGCTTCCCCAGTGCTTGGCTGGAGATCAGAAGCATCTTTCAAGATCTGCCCACAAAACGAAACAAGCTTCCCTTCTGCGAGGCTCTTGAGCTTTTCATGTTCATCAGATTCTATGACGTGCCCATTTGTATCCTCACTTGGGTCATTCCCATCATGTTCCACAGTTGATTTCTGAAGAATCTCCAAATAGATAGCAGTTCCAGCTAGTTCCTGGCGAAGAAGATTCAGTGGAGGCCTTTCTGGGGGTATATGGTGCATCCTGGTTCGAAGATTTGAAGTTGAGTTATAGGAAGAAGCAAATTCTAGGAGTGATAGCAAAATATCCATTATTGCAGTCTGCTGTGTGGTTTTTAGCCTGCTCCAGTACCTCTTCTGTATGCTGTCAATGGCCCCAAGTAGCAGTAATTGAGTGATACATTTACTCCTAACAGTCTCCATCATAGGATTCTCTTCATCGTCAGTTTTGTCAGCCCCGTCAGCATCAGGTGCCTTCACAGGTGAGGGTGGCACAATATCGTCTGTACGACCTTTTGATTTGGAAGTAAGACTCCTGACCAAAAGATTGTCCATCATATTCCCCATAATTCTTTGTCCAAAGGTCTGACCCCGTGGGGAAACTGCAGGTTGTGCTCTCCCTGATGGAGATGGCAAACCTTCTGAATTGTCTAGGCTAGTCTGTGCATTTGTTTCCTGATGACCATCCTGTTCATCAATATGACTTATTGAAGCTCCTCCTTCCCTGCTATCATGGTAACTACTACCAAGACCGTTGGTCTCTGCTTCTCTTGAAAGTGATTGCTGATTGTTTGGTTTCTGAAATCCTACTGAATTGAGGAGTTCGAGAGGTTGGGTTGTGTATGATGCATCTCTAATGCTCTTTAGAAGTGTTTCCCAGTCGCTGTCACTGAATTGGTGACCACCAACCTCTATGAGATGAACTAAAGCTCCAAGAGCAATTGAAACAACAGTCTGGTCTGTTTTCTTGGCACACTCAAGCAGCAAGCCCAAAAGAGGTGGAAGCATAAATGACACCTCCTTGTAGAAAGTATTGAAAAGGTTGCAGATTAACTGCAGAGAATGAATGCTGGTATCACGAAGCCAGTCATCCCCAGAAGAAAGGCCATCCCTTCCAGCATGCCTTACATGATCAAATATGGGAAATAATACACGATGAAAAATGCTCTCCCAAAAAGGTGAGGAGAATTTATGACCTCTCTCATTCAGAAGATCAAACAACACTTCAAGTGCACAGTGTCTAACTTCTGGTCTGGGGTCTAAAGTTAAATCTGATAGGCCAGCTAGCATAGGAAACCAATAATGCTCAGTAACATCAAAATGGGCCTCTGGAACATCATCAACAGGTTTAACAGCACCACCAGGAATGCAACCCTCTGCCAAACGGTCTTCACATATGCGTAGGAGAGCGATAGCCTTTAAACTAATTCGAGGTGTGCATTTATTATTTGCGAAACCAATAAGACAGTTGACGCAGTCCATGAAGCAATCACCAACAACTTGATCAAAATGCTCCAAGATAACTTGTTCTACATTTTCAAAAGCACTTTCAACAATATGTTCATTCTCATCATCAGCTGCCGCGGTGAATATCATGAACACACAACGCCAACCTGACTTTATGCTGCCAACTTTTGATTTGATCAACTGAACAATGCAATCAACAATTAGACCACGGATTTTTTCACTGTGACTATTTCTCATTAAAATAACAAAAGGCTTCAATATGTCATTCTGAAATGTGAATTTGTTCAATTCTGCACGTTCCAAGTACTTCATACCAAGCTGCCTCAATGAGTCAATTGCATACATGGCAACTTTCTCCTCGTGGTGGCTCCCAGCGGCAATAAAATGCTGTGACAAGACAGACCATATTCTCGCCCACACCAAACGTATCCGAGCCATATTATAGTAGCTTATCTCGACAAGCTTTTGTAAGCTAAAGACACGAGCAGGTGTCTGTTTCAGTTCTTCTGCAGAAACACCACAAAGAGCAGTGAAGAATTCAACAATGGAATCACTTGGTAGTTTTACACTGTTTACAAAGACTTGTTCAGCAGGCTTCCCAGACAACTCTTTCAGTGACTGGACAACAGATTCTCTCGATATTTGATTTGATCCCTGCATAACAGTTGCAGCAATTGAAGGATTTGAAGTGATATATTCAAGCCTGGAGACACATTCTAAAACAGCATTCCAAGTATCTTGCAAAGCATCCATATCTGTGTCAGCTAAGCCAAGGAGGGTCCGTAAAGCCTCAACATTTTTACTACGCATTTCCTTAGGAGCATGCAAAAATGTAAACCGCACTAAGGATGTCAAGAAAGCATAGCGCATGGTGTCCATCCCAAGAACACGAGTAAGATGGATGCCAGCCCTAAACCCTTCCATGCATAGCACAACCCTAGGCTTGCTGTCACCTTCCTCCATGGTAACAGAAAATGTTGCAAGCAAAGGCCATCCTACAGCTTCAAGCATTGGCCTAACAAGCTCGACCTGCTGAGCAACATGAAAAACACCTCTCTTCTGTCCCTGATTTTTGAAAAGTGCTTGAGTCTGCTTAATGATTTTCTCACTTTCTGCTTTGGTATCACTTGCTGACTTCAGTCTTGGAAGAGCTAAATTGAGGATATTGACAACACCCCTTTCTTCTGTTTCTCGTCTGGGTTTATTAGTTTTTGCTGAATCAGGGAAATCGTCTTTCATCTTTATCTCTTCCTGGACAATGGAATCATAAATTTCCTCCAAGAGCTCCTTTGGGGCACATTCCTCTGCATCACTCGCAGTGTTCATTCGTACGAAATCTGATTTTGACATTTTAGGCCACACCATTGGGTTGTGGGCGTCAGTATTCAACATTATAACAGCATAAGCAAGAACATAAGCAGTATCTGCATTTTTGAAAAGTCCAGGGTTATCAGCACAGTACCGCTCAGCAAACTTTTCCATTATGCGATCAATCTTTTGTGCCTCCCCAGGAAGGCGAAACCCTTTCAAGAACTCACGAATTGCAGCATCAAACTTCAATCCCGAAAATTTCATTGAATCAACATAAGCATGCATCACAGCAAGAGGGAACTCCTCATGTTGTCCCAAATATTCACCAATCATAGCCTTATCCAAGCTAGAATTGCTCTTGAGAAAGTGAGCTACAGATGTTGCATTATTTTCGATCAACTTATTTAATAACAAATACTCAATCCCCCTTGCTGGTTTGCGATTGAACTCTGAGATTGCAGCCTCCATTGTTGACTTATGAGCTTTAGCTATCTCAAACTGATTGCGACCATCCTCTTGGCTCTTTATTTCATCACTTGTTATGCTCCTTGCAGAAGAATCATTTTCACAAGCTTCGGCAACACTCCCCTGTTTCAAGGAATCTCTTCGAGCTTGCTCCCAATCAACCAATGACTTCAAAATACTCACCAAACACTGAAGAGATGAGCCTTTCACAGAAACTGTTTGAGAAGATGCGGCAGTGTTTGTATCCGCATTTTGAGATCCTTGTGCAATCCTTGAGAGTGCACTGACCATGCGTTCAAAAAGGTTTGGCCCCTCAAGGTCACAATCATAATTTACAAACATGTCTGCAAGCATTTGTGAATCCTTGCAGACTTTCTCCAGCATCCTAAGGACACTGGCCCTTTGGCTGAGTGGACTGTCAGAGCTATCGAGAGACCTTAAAACTATCAGAGGAAAGAAGACACCGATCTCACCCTTCAGACTCTCTCGAAAACGAAGCAATAGAACTGCAAATATCCCACAAGCGTACTGAAAAACAACCGCAGATGAAGACACAGCCGCTCGCAGAATAGCATAGGAAAGATAGGCTTTAACTGAATCGATGAAGTGGAAATTTTTGGTAAATGAATCACTGACTCCTTCTAGCAATCCCTGTAACAGTTCGAGTGATAGCAGCCTTGTCTTTGTAGCAACCTCATCACTCTCTTCCTTCATGCTCATCTTGCAGAGAGTCCGGAAGAGCAATAGTGCATCACGCTGTATTATGTTCACAGTGTCCAGGTCTATTCCACCTGATACTTTCTTTCCATCCTCAAGTTCAACAGCCTTGTCAAGAACAGCCTCCAACCCCTTAATATCAGCTCCTCCTGCAAGACTCTGAAGCTCTTCAACAGATGCTGGAGATGCTTCTGTAGCTCGATTCAAGGATAGCGCATCTCCAAGAGTAATTTTTTCATCAGCTTGGTTACCAGTGGATACTTCACCATTCTCTGATTCCTCTGTGCTAGATGATGGTTCTTCTTTCATTGCAGAGCTGGCAGGTGGTACAGAAACCTGCTCAGATTCCATCCGCCTGAATACGATGCTGATCATCTGGGTTAACATGGCCTTTGAGGTAGCCTGGTTCACAGGGCTCTTGCTGTTGAGAGCAATATTATAGCATACTCTAATCACTCCAAGCAAAGGTTCTCCATGTACTCTAAATCTATTTGAAGCAACAGCATTGAGAAGCACTTTCAAGACTTGGAGAACAGTGCTGTCAGAGGAGGTGTTATCAACACAACCGCAGACCATGTTCAGGATGTCAGTAAATAGAGGGGAATTTTTACCACCCTCTAAACCAGGGTCGCCTTCTAGATGGTCATAAGCAATAAGTTTATGGAGGCAGTCGAGCGCGGGCTCGACGAGCTTGACGTGCTTGGTCTCGAAGGCGAGGCGGAGCGGCTGCAGCACCAGCTCGGCCTGAGTCCCCTCCAGCACGCGCCCCGCCGACGCCAGCACCTGCGTGATGGGCGCCGCCGCCGCGTCGCCGCCCTCCTCCTGTCCCGCCGCCGCCGCCCCCTTGATGGCATCGAGGTAGGACTGGATGGATTGCTGCAGCGCGGCGAACTTGCCGCGGTTGGCTGTGCACTCCTTGAGCATGGCCTCGAAGGCCCGCGTGACGAACCCTCCCGCGGCGCCCGCCATGGCCGCAGATCTCCTCCGGTGGGTGGCAGAGGAGAGAGAGGGGGTGGGAATGGTTTTAGATCCGAGGAGAGGGAGCGCTCATGGGGCGCGAGATCTGAGCTTTGTGGGGGTTGGAGGAGGAGGACGAGGGGGGTGGATCTGTTTGTCTCGCTTCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0384900.1 | 7 | 22635051 | G | T |
| Osa07LNT0384900.1 | 7 | 22637913 | G | A |
| Osa07LNT0384900.1 | 7 | 22639154 | A | C |
| Osa07LNT0384900.1 | 7 | 22641100 | G | A |
| Osa07LNT0384900.1 | 7 | 22642354 | C | T |
| Osa07LNT0384900.1 | 7 | 22642649 | T | C |
| Osa07LNT0384900.1 | 7 | 22642775 | T | A |
| Osa07LNT0384900.1 | 7 | 22644481 | G | A |
| Osa07LNT0384900.1 | 7 | 22645043 | T | A |
| Osa07LNT0384900.1 | 7 | 22645772 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0384900.1 | osa-miR5544 | Translation | 5.0 | 18.204 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR5791 | Translation | 5.0 | 17.111 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR5796 | Cleavage | 4.5 | 16.125 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR5797 | Translation | 3.5 | 9.438 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR5804 | Cleavage | 4.5 | 16.174 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR1440b | Translation | 5.0 | 18.029 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR818f | Cleavage | 4.5 | 21.761 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR7692-5p | Translation | 4.5 | 13.465 | 1 | 24 |
| Osa07LNT0384900.1 | osa-miR1861o | Cleavage | 4.5 | 17.608 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR166b-5p | Cleavage | 5.0 | 12.789 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR166e-3p | Translation | 5.0 | 16.866 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR167h-3p | Cleavage | 4.0 | 15.602 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR171i-3p | Translation | 4.0 | 12.705 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR529a | Cleavage | 4.0 | 20.254 | 1 | 20 |
| Osa07LNT0384900.1 | osa-miR1861a | Cleavage | 4.5 | 17.608 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861b | Translation | 5.0 | 17.177 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861d | Translation | 5.0 | 9.069 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861d | Translation | 4.5 | 17.177 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861f | Translation | 5.0 | 17.177 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861g | Cleavage | 5.0 | 9.069 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861h | Translation | 5.0 | 9.069 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861i | Translation | 5.0 | 17.177 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861j | Translation | 5.0 | 9.069 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1861l | Translation | 5.0 | 17.177 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR1865-5p | Translation | 4.5 | 14.034 | 1 | 24 |
| Osa07LNT0384900.1 | osa-miR1870-5p | Translation | 5.0 | 18.662 | 1 | 24 |
| Osa07LNT0384900.1 | osa-miR2098-5p | Cleavage | 5.0 | 20.827 | 1 | 20 |
| Osa07LNT0384900.1 | osa-miR2101-5p | Translation | 4.5 | 24.884 | 1 | 22 |
| Osa07LNT0384900.1 | osa-miR396f-3p | Cleavage | 5.0 | 23.193 | 1 | 24 |
| Osa07LNT0384900.1 | osa-miR2105 | Translation | 4.0 | 14.404 | 1 | 20 |
| Osa07LNT0384900.1 | osa-miR2870 | Cleavage | 5.0 | 10.569 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR2872 | Translation | 4.0 | 17.884 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR2874 | Cleavage | 3.5 | 18.506 | 1 | 24 |
| Osa07LNT0384900.1 | osa-miR2876-5p | Translation | 5.0 | 9.857 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR5499 | Cleavage | 4.0 | 18.414 | 1 | 21 |
| Osa07LNT0384900.1 | osa-miR5523 | Cleavage | 5.0 | 10.157 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0384900.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0384900.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0384900.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0384900.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0384900.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0384900.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0384900.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0384900.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0384900.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0384900.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0384900.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)