© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0385200.2
GCGCCTAACCGTCATCATAAACTCGACATACTGACGTACAAAAGTTTCTTCACTTCTGACTTCTGAGTATATTTACATATCGTCTAAAAAACTACGGAGATCACGTCATGTGATCTGAAACCAGGCACTTCGAGGTGTTGATAGCAGAGTACAGTCTAAAGGATTATAGAGAGATCACAGAGGAGCATTATTGTCTAAGGATGGGGAACCTATCAGGGATAAAATGGCTTGGAGAAAGAGGGGGGGGGGGGGGGGGGATGCAGCAATCTGCACATCGCCACTTCACAAGTTCGCTGCTTGAACTTTCCTTGATCTGCCTACGCCTGGTCGAATGCTTGAGCGATCAACTTGCAAGCAGGTAATATGACTAGATAACTCTTGAATTTTCAGCAATGAGCTAATTGAGGATTCTGGGATTTTTCTCCTTTTGGAAGCGCCTACATGGAAGCCTTTGTTGCATCACTCACCATGCGAGTTAAATCTTGGACAACTTCAGACATTGAGGGCCTAAACTCTGGCTCATGCTGAATACAACTGCTGATAATGTCAACAAAACGCGACAACGCCTTTTCAGAACATTGGCCTCGAATAGAGGGATCTACCATCTTTGATATAGCATCGATATCGTAAAGCTGGGAAGTGGCCCACCGCACCAGGTGTTGCTCAGCACGTGGACGTGAACTGTCATAAGGTTTACGCCCTGTAAGAAGTTCCAACATGACAACTCCAAAGCTGTAAACATCACTTCGATCACTTAATAATCCAGATTCATGCACTTCGGGGGCTTCATAATGGAACAAGGTGCGCATACGGCCAGACAACTGGGATACTGATCTTGATGACAGTGCTGCAAGACCACATTCAGAAATATGCACAACTAAAGTGCTGTTGAGAAGAACAATAGACGGTTCAAAATTTTGGTGTACAATTGGAGGTTGACAACCATCATGAAGATATTGTAATGCTTTTGCTGCCCCCACAGCGACTTGGAGGCGAGCATTCCATGATAATCCCTTGTTTGAGTCATCAACATAATGAAGTTCATCATGTAGAGTCATCTTGCTACAGTGCTCATATACAAGTAATCTCTGATCAAACTCAGCACAATATCCAACAAGCCCGAGTATGTTAGGATGCGTCAGTTCGGAGATGTTCACAACTAGCTCTAGAAAGGCATCCGCTGGTATTCTTGAGTTAGCAGCATCAATCTTCAAAACTTCCAGTAGCTCTCCATCCGGAAGCTCTGCCAGATATACCTTACCAAACCTGCTATCTCTTATCAAATTTTCTTCGTTGAAACTATTGGTATATTGCTGAAGGGACGCAATAGAGAATGACTTGACGGTAGTAGTTAAATCCAATTTCCCAGCTGAAGGTACTCTTCCCTTTCTAGTACGCACGCTGGGATGTACAGTGACCTTTTCAGTACGCAGTACAGCAGACTGTGGAGGATGCAGTTGTTCATCCACAAAATTATCTTTTTTTTCCATATCAATCACATGCTCTTTTTGTTCCATTGTAACCACCCTAGGAGCAGCTGACATTGATGAACCTGGCTTCCGCTCTTCCCTTGAATCATAAACTGCATCTGAAGCTGCTGTTGACACATTCAATTTCTGCTCCTCCCTTGTATGAGAAATCACATTTGAAGCTTTTCCAGCATTATTCTTGAGTTTAACTGGTGGTTCCTTGATGTCTGAAACTTCCTTGATTTTAGGTTCTCCAAGCTTTTGAGGAGACCTTCCTAACTGGTTTTTTGTATACACATCATCTCTTGATTTTCTTTCTTTGTACTTGGATAGACAAAACATCACCATTAGCACGAGAACCACCGCGGATACCACCCCAACAAGAATGTATCCAACAAATTTCATTGCAGAAACATTGTTTTTTCTTGATGGGGCATTCCCTGCTGGTGCAATAGAAGAATTTGAAGGTTCTTTTGTGGGGACATGCCCTGCTGGAGGTGATACTGATGGTAATGGTGTCGGTGCAGCAGGAGGCAATGCTGATGGGGCTATGCTGGTATTGAATGGGTTCCCATCCTTCTTAAAATTTGGTATGTTCTCTAGTTTCACAGGCACAGGACCGGAGAAAAGATTGTTTTCTATGTTCAAATCTTGGAGAGGGAGATCTTGCAGCACATTAAGCAACCCAATTATTTGATTGTTCTGAATATGCAGGCTAGTCAATGCTGTCAAGTTTCCCATTGAAGGTGGCAAAGGACCAGTCAAGTTGTTGGAAGAAAAATCTAAATTTGCAAGTCCAGTTAGAGTTGAAAATGCATCTGGTATCTCTCCAGATAAATGATTGTTATTGAGGGACAAGCCTGTCAAAAGCGTAAGTGTCGACAATGTACTTGGAATGCTACCACTTAGCTGGTTACCAGAAAGGAAAAAACGCTGCAATGTGATTGGCAGATTATCTGGTATGGTTCCACCGATATTATTGTTGCTAAGATCTAAGGTGATTAGCGATGTGAAATTCCCCAGTGTGTTACCCAGTTGTCCGCCCAAATTTGCAGCATTGAGAGTTATGGAGGTAATATTTGAGACCACGCATTCAACACCCTGCCAGCCTTCATTGCAGGGGTCGCCACCGTTTGTAATCCATCCAGGCACTGAAGGTGACCCAAGTGCAGTGTACAAGCCATTTATTGCAAACACATCTTGCTCATAAGTGTAAGACTGCGAGAGCGGCAGCGCGGCGGAGAGCAGCAGCAAGAAGACGGCGGCAGAAGCAATCATGGGCAGGGACTTGCTCTTCACCATGCGAACATCCATGAAGGATCTTCCAATGCGGGCATCACCTGACGAGCACTTCCGAGGAATGATCAAGAAAGTAATCGCCAACTTTGCTTTGATCTCTGAGCGCCCAGCCGAATGATGAATATCTGAGGATTGCAGGTGCAGCCTGGCGTCAGAGAGGAACAGGACAGATAAAGAAGAAGGAAAAAAAAAACAAAGTTGGCTAATGGCAAGCAATGCCAACGCTGGAAGAATCTCGCAACGGAAAGAGGTGCCAAAATTCGGCAAGAAATCCACCACATCAAGAAAAAAAATCCCCTTTTAATCACTCGCAACAGCACAGTCTCCAAAAGAAATCCGTCGAACACGCCAGATATAACCCAAGAACATGTTTATTTTACCTCCAAAAAACAGATTGCAACAGAGAAAAGGGAAGCCAGGAAGCGAGAAGATGCAGAAGAAGACCGAGAACAAAAGAGAGAAAGAAAGAAAGAAAAGAAAGAAGATTATAATCCGATACCTGCAGATTCTTGTCGCCACAGCACCCCTCCTACGACGACCCTATCTTTGCCGCCGCCGCCGCTTTATGGAGACGCTCGCCACCGAAAGCTACTACTACCAGTCCACCACCACCGAGTGCGCCCTCCTTTCTCGCAATCTCCCCCCCCCCCCCCCCCCCCCCCTCGTAATAATGCGTTTAAAACTTCTCACCGAGCCCGGAAGCCTTGGCCGCTAAGGATTTTGCTGCTCTGCTCGGTGGAGAACAACGGAGACGACGGGAGAAAGGGGAGGGAGGAAAGAGACAGATCTACACTAGCCTTGCAATCTCGCAGAGCCGTCGCGCGGCAGGGGATTGGATTGGGGAGATAAGCGAGCGGCGAGTGAGGAGGAGAGTGTGAGAGAGCGTCTGTTACGCTTGTGTGCGCGTAGGCGGAGATGGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0385200.2 | 7 | 22673641 | A | G |
| Osa07LNT0385200.2 | 7 | 22673917 | T | C |
| Osa07LNT0385200.2 | 7 | 22674199 | A | G |
| Osa07LNT0385200.2 | 7 | 22674216 | A | G |
| Osa07LNT0385200.2 | 7 | 22674751 | G | A |
| Osa07LNT0385200.2 | 7 | 22675011 | T | C |
| Osa07LNT0385200.2 | 7 | 22675627 | T | C |
| Osa07LNT0385200.2 | 7 | 22677405 | T | C |
| Osa07LNT0385200.2 | 7 | 22676389 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0385200.2 | osa-miR5525 | Cleavage | 4.5 | 19.87 | 1 | 22 |
| Osa07LNT0385200.2 | osa-miR5528 | Cleavage | 5.0 | 15.232 | 1 | 21 |
| Osa07LNT0385200.2 | osa-miR5802 | Cleavage | 4.5 | 12.619 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR162a | Translation | 5.0 | 15.485 | 1 | 21 |
| Osa07LNT0385200.2 | osa-miR171f-5p | Cleavage | 4.5 | 21.965 | 1 | 21 |
| Osa07LNT0385200.2 | osa-miR444d.3 | Translation | 5.0 | 18.292 | 1 | 21 |
| Osa07LNT0385200.2 | osa-miR1882a | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882b | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882c | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882d | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882e-5p | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882f | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882g | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR1882h | Cleavage | 4.0 | 15.099 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR2093-3p | Translation | 3.5 | 21.877 | 1 | 20 |
| Osa07LNT0385200.2 | osa-miR2864.1 | Translation | 4.0 | 19.976 | 1 | 21 |
| Osa07LNT0385200.2 | osa-miR2865 | Translation | 5.0 | 21.882 | 1 | 22 |
| Osa07LNT0385200.2 | osa-miR2877 | Cleavage | 3.0 | 20.145 | 1 | 24 |
| Osa07LNT0385200.2 | osa-miR5160 | Cleavage | 4.0 | 16.501 | 1 | 22 |
| Osa07LNT0385200.2 | osa-miR5518 | Cleavage | 4.5 | 18.46 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0385200.2 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0385200.2 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0385200.2 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0385200.2 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0385200.2 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385200.2 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0385200.2 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0385200.2 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0385200.2 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385200.2 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0385200.2 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)