© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0385500.1
GGTTCATAGTATTTTTGGTTCTCCATTTTGAATTTATGGTTTGCTTGAAAAGATTAGAGTTCCAAGCTATAATATGGTTCTTATATGAGTTCATTGTTACACACTTTCCAATTTCCAGCCACTCCACATAGTACATGTAAAAAAAGGCAAAGAGTATAACTGCAGGTAAAGGTCCATCAAAAACCTCCAGAGGAAGGTAAATGCTTCAGCAGGTGACTTCCGAAGGAGAGCATGAGTCTTGCGCTCATTGGTTTCTTTTCAATTAATGTTAATCCAAAAACACTTAACAAGACACAGAAGGATGACCTGAGGGTAAATATCCATAAAATCTGGAAAGAGCATTGGGTCCATCTGTTCTTGATATAAGCTTGAACAGTAGGAGGCATATGCACCAAGCTATAGCTGAAATTGGCAATGAGTTGTATAGGCTTCCTCCATTAGTTCCTTAGCCCAACTCAAAGTTCGACGAAGTATTGATTCCATTTTCATGTGATCTAAGGTATGCCAAATAATTCATGACTACCTTTATCAGCAGATTTGTCTGCCCCAAAAAATTCACGAGTCCCTTTATCAGCAGATTTGTCTGCCCCAAAAAATTCACGAGTCCCTTTATCAGCAGATTTGTCTGCCCCAAAAAATTCACGAGTCCCTTTATCAGCAGATTTGTCTGCCCCAAACAATTCACGAGTCCTGTTATCAGTGGACTTATCTGTGGGGGTGTTGTCAAGGACTTGATACTGACGGTTAGTCATGTGCCATTCATTGACAATAATGGCTGAATCGGTAAAATGAGAACTACTTCCCTCACCATCAGAAGGAAATGACACTGCACCATCAGTTAATCTCCGTGGTCGCCGGACAGGTCTGCTGCTCCTGCTTGAAGATGGGAAGTTTCCTTCCGCGCCCTTCTGCTTTGTCCCAATAAAGCCACAAGCAAGAGCTTCCAGAGCTCGGGTTGTTGGTGGGCGGCTTCTGGTACTCTGCCTCCTCTGCTCACTCAATAGCCCATTACAGGAGGCATTGATGTCTGGAAGACAGTCATCCATCCTGTTGGTTTCAGAAGAATGTATAGATCTATCCATTGTATGTGTATTCTTGTCAGAAGAAGGCACGATGTAGCTCACAGCTGACTCATAATCAGAAGGCACTTGTGGAATATTCAGATCAATAACATGCTTATCTTGGGACTTTTCCTTGAGTACCATTTTTTCATCGGTAGGGGGCACATTGTACTGCTTGTGACATAAATGAATGTTACTCATGTCAAAGTTTATGGTAGTTGATGAGTTCGGAATTGAACCCCATATGAAAGGCTTAGCCCCTGCGCTTGCTTCATTTGATTTAGACACATCATGTTGTGCGGTGTCAACTTGCTTCCCATGCTGTCTTTTATTGGCAGCAGTATTTCTGCGTCCAGTTCTCTCATTCTTACAAGATACTAACCTCCTTCTCTTTGCAACAGATGCTGCTAAGAAAATCTGGGGCTCAGGAGTTACCCTTTGATCAAACTGAAAGTTTATTTCAGTGGAAGAATTAGTAGCATGGACCCTTTGAGTACCGACAGGAAGAATAGTTGCAGTTGAGGAACAGGCATTATTCATTAAGCTGAAACCTTGATCAAATGACATGTGACCATTGGTTGATGTCATTGTGCCTGCGAAAGTAGAATTCTTCTGAAGTACATCAATATCCATCCTATCACCTGTTGGTGGTTTACATTTCTTCTCATTGACATACTTAGCACCTGTCTTGTTTTGATTTGTATTTATATGTTCATAAGACTGAGAGCTGTCCTCTGAGTCAGAGTGTTCTTCTGAACTGTCACTCCCAGAATCTTCTGAATGTGGTGAAGACATGTAACCATGACTGGCATCTGTAGGTAGATTTCTTAGGGACCTCACCTTGCATGGTTCTTCTCCTTGAACAACACTAGTATCCACCACAGTAAATTTCATTAGCTCTGGTGAACACCCAGGTTCACTGGGCCGGGTATAACAAGAAGATTTCTTGTCAGTAACTGTGCTTTTCTCAAGTTCAGCATCATGGATCCATCCATTTTCAATCTTGAACCCACCTTCACCATTACTACCCTCAACTCCAAATTCAAGCAGTCTTGGTTCTGATGCAACTTTGCTTAACACATCACTAACAGAATCAAAATAATGATTTCCTCTGACAAGCTTCTTTCTAGAAAATTTCTTTACGCCTGGAATGAGGAACACTAAAGCATGCTTGCCAACTAGAGAAGAATCCTTAGGCTGCTCCGAGTGCCACCCTCTTGCAAGCAGGCGAGGCCAGACAGCCTCCCAGAATAGATCATTAGATTTTGCCTTGCTTAGTCTGAAATCACCAGTCAAAAACTTTATGATGTCTCCAGATGAAAGCGATGAGCAAGCCTTGCCGATAGGGATTTCTGCACGTGTTGAGATACCATGGTTTCTACTAGGATCTAATGCAAATCCAGTCAAGTCATATTTTCCCTTGCCAATTCCAACTGCCTCTACAAGAACTCGTGCGCCAACTGTGGACCTTAAGGACAAAATAAACTCCTCAAAGGTAGATGTTCCCTCGTTGAATGTTTTAAAGACCTCCAACAAAGGATGTTGAACTTCCCTTGCTATACCAGCAAGCATACGTGACAGCAGTTCCTGCTGTCTTGTACCAGAAAATATGCGCAACCCAAGTATACATCTCCGGCTTCTTACTTTTCTACATGCAGCCCATCGATTATATGAATCAGACCTGAAGAACTCTCCGTAGTAATAGGATAGAACTTCTCCCATTGTCTTACATTGCAAAAATTTTGTCACCTGAACAAGATTTTTGCCAAAAATATATAGACCAAGAAGAAAAGTTTGTGCTTCTTCATCAGTCCAGGAATAATGTGTCATTCCTGGCAGAGGAATATAATCACTGGCTTTCCCATTTTGTAAGCAGTTAATATCTTGTTCAGCAGATTTTAGAAGTTTCTCATCATGCTCATCACATTCAACTTTACAGCCTGGAACATTTCTAGGAATATCTTCTGTGACGTGGCTATTACATTCATCTTGTGAAGAACATGAACTGCGTCCTGAGAATCCTGTCTGCTCTTTTTTTACATGATCGCTTGTTTTTTGGGTCCATGTGACTGGAATAGCTAGTCCCACACCAACAGGATAATCAAAACCGAAAATTCCACTGTCATCAACTGGACATGACCTTAGTTTCATGCGTTCCTCTTCTGTTGCTAGATTTGGAATTTCCACCTGGTACTCATCCCCCACACGTGGGTACACTCGTGTATCTTCATTAACCTCTTCAGGACATATGGGCTCTAGAAACCGTGGCTGCTCAACAAGCATCTCTATTGAATGCTCTTCACCATCCTTGATTTCAATAGGATCCATCTGGTACTCTTCATCATTTTTTACTTCAAGATCATCCATCGCGGATACGCGGTGGTGGTGACCGGGACGAGTTGATGACGGCGGCGGCGTCGCCCAGTTGGCGAGGGCGGCGTCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0385500.1 | 7 | 22833076 | C | T |
| Osa07LNT0385500.1 | 7 | 22832863 | T | C |
| Osa07LNT0385500.1 | 7 | 22833176 | A | G |
| Osa07LNT0385500.1 | 7 | 22833521 | A | G |
| Osa07LNT0385500.1 | 7 | 22833671 | G | T |
| Osa07LNT0385500.1 | 7 | 22833949 | A | G |
| Osa07LNT0385500.1 | 7 | 22834355 | G | A |
| Osa07LNT0385500.1 | 7 | 22834621 | C | T |
| Osa07LNT0385500.1 | 7 | 22835107 | C | G |
| Osa07LNT0385500.1 | 7 | 22836478 | A | G |
| Osa07LNT0385500.1 | 7 | 22836669 | A | C |
| Osa07LNT0385500.1 | 7 | 22836934 | A | C |
| Osa07LNT0385500.1 | 7 | 22832838 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0385500.1 | osa-miR1861o | Cleavage | 3.0 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR166a-5p | Translation | 5.0 | 18.938 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR166e-5p | Translation | 5.0 | 18.938 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395t | Cleavage | 4.5 | 14.89 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395f | Cleavage | 3.0 | 14.89 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395f | Cleavage | 4.0 | 12.805 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395f | Cleavage | 4.0 | 12.732 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395f | Cleavage | 4.0 | 11.704 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395f | Cleavage | 4.5 | 11.076 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR398a | Cleavage | 5.0 | 14.303 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR171c-5p | Cleavage | 3.0 | 16.198 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR171c-5p | Cleavage | 4.0 | 14.456 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR426 | Cleavage | 4.5 | 16.814 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395v | Cleavage | 4.5 | 11.076 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR1852 | Cleavage | 4.0 | 16.345 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR1852 | Cleavage | 4.0 | 12.716 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR1861a | Cleavage | 3.0 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861b | Cleavage | 4.5 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861b | Cleavage | 5.0 | 22.472 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861c | Translation | 4.5 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861d | Cleavage | 4.0 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861f | Cleavage | 4.5 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861f | Cleavage | 5.0 | 22.472 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861h | Cleavage | 5.0 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861i | Cleavage | 4.5 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861i | Cleavage | 5.0 | 22.472 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861j | Cleavage | 5.0 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861l | Cleavage | 4.5 | 17.507 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR1861l | Cleavage | 5.0 | 22.472 | 1 | 22 |
| Osa07LNT0385500.1 | osa-miR395x | Cleavage | 4.0 | 14.89 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395x | Cleavage | 5.0 | 11.076 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395x | Cleavage | 5.0 | 12.805 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395x | Cleavage | 5.0 | 12.732 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR395x | Cleavage | 5.0 | 11.704 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR5144-5p | Cleavage | 4.0 | 18.797 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR5161 | Cleavage | 4.5 | 14.935 | 1 | 20 |
| Osa07LNT0385500.1 | osa-miR5492 | Translation | 5.0 | 12.814 | 1 | 21 |
| Osa07LNT0385500.1 | osa-miR2932 | Translation | 5.0 | 20.968 | 1 | 19 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0385500.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385500.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0385500.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0385500.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0385500.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385500.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0385500.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0385500.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0385500.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0385500.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0385500.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)