© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0385600.1
AGATGCAAAATCTGAAACGTTAAATTACCACATCTCATGCCAACAGAATAAGTGGTTTGATAGTGTCGATCTAGCTTAAGCGACACAGAACCTGTCATGCTCATATTCACATTCCACTAACAAGCTGGAAATCCCATGAAAAATACAAAGCTGGAAACCCCTAAATAAATAAGCTGGAAAGATAATCTAAATAAACATTACTGTAGCACATCGACACAAATGTATTTGCTGTGCCCTTGCCAAACACACTTAAGAAACTGATGAAGTCAAGCTCATGTTTCATTTCTGGGGGTGCCAGCCTCTTCCGTTGTGGTTGAATTTGGCCCTTCGATCGCTGCTCTGACCGCTTCTGATTGTTCAGGACCGTTTATTATATAATTTGCTGTTGAAGCACCCCTGGCGGCCATGTGCTCTATGAAATGGATCTCATCTTCATGGCTGCTCACGAACTTGTTTAGTTCCTTCGATAGAATATTTAGGATTCTATCGATTTTTGCTTGATGTTTCAGGAAAAACGGCCGCATATACCTTCTATATACATGCTTTGCTCCACTGTTTGAAGGAAACTGGAGCCAGACAAGAATAGCAAACTTCACGTGATAATAGAAAGGAACACTTGAAAGAATCTGATCAGCAAAGATTTCCGCAATGCTAAAAGATCCATATGCTGCAAAACATTTTGAACAAGAGCATCTAAAGGTCAAAGCAGTAAGTTTGATATACATCTGTATCTTTTCTATTTCTTAGAGATGTTCATTTAGATGAAAGCTGATTACACAAATAATTAACCAACTGCCTTTGTAACTATAAACCATAAGATCATACAGGTATGTCCTCCAAGGATGCAAGTGGCCAGCCGCTAACCCACAATATTAAATGGCCTTTTGGATGGGATAGTAGGCTGGCCCACTTGCATCCCTAAACTCCTCAGCAAAGTAACCATGTTAAGGTGATAGGACTAGTAAATGTGCAGAGTATTAGCTTTGACACTTCAAATAACTTTCTGAGCATGCAGACACCATATAAATAACTTTCGAAAAATGCAACAACCTCCGTCATCATTTTTCTTTTACTTTAGCAGTAATATTATAGCAATTGGTCACATAGAGTACCTATCAATATACTGAAAAGGTGCTTCAAAGTTAATAGTGAAAATTTCATAGGATTTTGTTTTATTACAGACCTGCCCAATACAAGAGCCACCGCTCTTTTTCTTTTTGATCCTTCTTTTCAATAGCTCTGAAAGTGGAGTACACAGGCAGACCAACCCCAATTGCACAACTGGCTGTACGGATGACAACAGTAGAGCTTAGTGGTGCCAGTAAGAGCCGTAAACCCACCTCGCCGGAGATGGCGGGGGCCAGAAGCGCCATCGGCGAGTTCCGCACGCCGCGCGGGGGTGGAGGAGGAGGAGCAAGGGATCCCGCCGCGGAGGCGGAGGCGCGGCTGCGGTTTGCGGCGTGGAGGGCAAGGAATCCGCGGCGAGTTCGCGTCTCCGCGGGTAGGTCTCCCCTGAGTCCAATTGGTGGGGGGATGGTGGTGGTGGTGGTGGTGGAGGAGGAGGCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0385600.1 | 7 | 22845578 | A | G |
| Osa07LNT0385600.1 | 7 | 22845963 | T | C |
| Osa07LNT0385600.1 | 7 | 22846257 | T | C |
| Osa07LNT0385600.1 | 7 | 22846563 | T | G |
| Osa07LNT0385600.1 | 7 | 22846631 | G | C |
| Osa07LNT0385600.1 | 7 | 22846925 | A | C |
| Osa07LNT0385600.1 | 7 | 22847410 | A | G |
| Osa07LNT0385600.1 | 7 | 22848517 | A | G |
| Osa07LNT0385600.1 | 7 | 22848666 | T | G |
| Osa07LNT0385600.1 | 7 | 22848728 | C | T |
| Osa07LNT0385600.1 | 7 | 22848837 | T | A |
| Osa07LNT0385600.1 | 7 | 22848942 | T | G |
| Osa07LNT0385600.1 | 7 | 22846446 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0385600.1 | osa-miR5537 | Translation | 4.0 | 7.656 | 1 | 22 |
| Osa07LNT0385600.1 | osa-miR5540 | Cleavage | 5.0 | 20.406 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR5836 | Translation | 5.0 | 14.09 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR408-5p | Cleavage | 5.0 | 19.054 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR414 | Cleavage | 5.0 | 18.076 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR1857-5p | Cleavage | 5.0 | 18.615 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR2864.2 | Translation | 4.5 | 11.149 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR5492 | Translation | 4.0 | 16.186 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR5494 | Cleavage | 3.5 | 16.491 | 1 | 21 |
| Osa07LNT0385600.1 | osa-miR5499 | Cleavage | 4.5 | 11.216 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0385600.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0385600.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0385600.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385600.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0385600.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0385600.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0385600.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0385600.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0385600.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0385600.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0385600.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)