© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0386000.1
CAACCTTGATTTTTCTTTTCATCAGTTCATTTCTCACTTCTCTTTCAAAGCTAATTACAACACAACACAACCGAAAAGGCAGGTCATGCCATGCCATGCCACCCCCCTCCAACCCAATCAAATCATGGCTCATCTATGGGATAATATGTTTCTTCTCCCAATTGCTAAAACAATCCAAGCAGAGAATGGTGAGGAATATAGAGGGAAAGAGGAACACCACCACATCACAAAAGTTACCTTGTCCTGCATTCTAATTAAATTTTGCTTCAGTTAAGAGAACAACAAAAAGAACAAAGCTAAAGCAGTTGGGAGAGGGAGAAAGAGACCAGCTTTTGACATCCATGCATAAAACTGCTAAAAAGAGATTCTATGCACCTCCAGCTTTCCATCATGAGAGGATAACCTACTACACAAAAGTATCACTCCCATCAACCATTCCAAATACTTCAGTTAGCAAATGATCCAGCAAAGGAATGGGCGCGCCGTCCTCTTCGATTAACAGCCAGCAAACAGGCTCTTGCGCCTGTGGCTGTTGCTGCGATCTGCTTCTTCTGGGGTCCAAGAGGCGTAGCTCCGTTCGCGCATATTCAGAATTAGCAGTTAGCTCGCAAGTCCAGAGTAGCGTCCTGAAGTCCGAGCATCGACATCTTACTTGCCAGCAGCAGGCTTCTGATCACTTGATGGTTTTACAGACATTGACATTGGGGCCCCAAAAGTCAATTGTGCCGCTGACATATGAGAGTGAGGCACACCGCTCGGAGACTGAGATGCTGCGGCAAGATGCATAAAACTGCCAGCGGGAGGATGATGAGTCTTCATGTTATTGCTGGCTGCAGCCGACATGGCGCTCTGCTGATGGGGCTGCTGCTGCTGCTGCGTCTTGTCAGCTGAGCGCTTCTGGTAAAGGCCAAGAGCAACACCTCCAGCAGCTCCAGGGGCTTGTGGTGTGTATGCATTGGAGATGAAGAAATGACCTCCTTGTGGAAATGGCTGCTGTTTCATCATGTGCGACTGCTGCTTACTGCCTGAATTAGAACCAGGCGGCACATTTGGCTGTTGACCAAGGATCGATGGCATAGGCATACTACTATAGTGATTTGTGGGAGCTGACTTGGCTCCAGACGTCGATGCTGGATTCTTGGCTGATTGTTGTTGAGGTGACGGCAATTGGACAGCTGGTGGAACACCCTTTGCACTTCCAGAAGCCGGTGGGCTGCCACCAGTACTTTTGGAGACTGAATTGGATGGTGAACCAGAAGCAACGGGAGCATTTGAAGATCTTGACAAATCCCCTCCTCCAGTAGACATATTAGTGACAGGACCCATCTTTGATGAACTCTGGGGTTGGTGGTTTGAGGTAGAGAGAGACTGCATAGGAGCCTTAGCTTGTTGCTGATGGAGACCACTCTTCATCACAATCAAATTAGAGGGTGAAGCACCAGGGGAAGCCACACCAGCAGGTGCACCTGTTGCTCTGGCTGACGAAGGCTTCAATTGAGGAGATTGACTAGGAACACCCACTTGGGCAGCACTTGATGGGTACATCATACCCTGAAAACTTGGCATGTTCAAGCGGTCTGAATATCCACCTGTATTGCTTGGTGCAGCAGATCTGGGGCGAGAGTTCATATGGTGATGCTGAATCAATTGTTGCTGCTGCTTATGAAGTTGAAGGAAATGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGAGGAATGCTGGATGGGGATGGTGCTGCCGCTGATGTAGCTGCCGGGGCCGATGTATTTGCTGATTTGCCTCCTAGACTGAAGGCATTTGAAGGTTCTGACCCAATAAGGCTCAAGGTGCGGGATGAGCTATCATTAGTGCTTCCACTAAGGAAAGGAGGCACATAAGACTTGTTATCTTGCCTGGAGAAGGAAAGTGAATGCTGCTGTGAATCACCTGGATACTTTGCAGCTGCTGATTTCTTTCTCTCACTGTCAACAGTGTTATGCGTTGAAGAATCACCAGCCACAGATTTTGTTTCTCCACTGACCTGACGCTGGGGCTTGTGTTGACCAGCTTGAACAGATTGCGCTGTGGCAAAATTGAGCTGAGGATAACCATGCCTGCCTGCTTCTTGATGGCTCTGGAATAGTTGATGGTTCGGCCCCAATGAAGAAAAGTCAAGGCCACCTGGGGCAGATCCAGGAGCACCCACAGAACCAAAAGGAACCACAAAAGAGGGAGAGGAAGCAAGATCAATTCTCACACCCTGCCCTCGACTCGCCGGTGGTAGCTGATGCGGGTGGTGATCACTTAACTTCTTGTCACTCTGACCACCACCACCAGCAGCGGAAGTAGGGGGCATCAATGCAAAATTTGGAAGATGAACTGGAACGGCATAATTATGATCATAACCTCCTTTCTGAGGGTGAGATGACTTGTCATCACCCGATGGACCATCTTGCACAGTTTTCTCACTGTCCTGGCGGTGAGCAAGGCCAGGCAGCAGCACTGGACGCTGGTTGCCACTGGAATAGCTCTGGGAATTACTGGCAGCTGCAGCAGCATTAGCATTTGGTGCATATCCCAGTAACCCTTGAGATTGTTGTGGCTGATGCTTCTGAGATGAAGCGGACATGTTTGACATGGGGTTCTTCTGAAGATTTTGTGGTGACGCCCCTTGCTGCTGTGATGGGTGCAACATGTGAGAAGGGTAAACATGCCCATTGAAGAACGGAACAGCAGGTCCTGGTGGTGCCATGCCTCGATAGGCAGCAGGAGGTCCTCCAGCATGAGCAGCAACCTGGAACGGGTAGCCGCCATTCTGTAAGATGGCAAAAAGCTGAGCATCAGCTGGTGGCAAGTTGGCAAAGCTCAGGTTCATGGCCGCTGCGCCAGGGTTTGCTGAAGAATTGTGGGCAGCAGCAGATGGTGGCATTGTATTACTGCCCACAGAAGGCTTTGCATCACCCACTCGGCTGGCAGCATTTGCAGCAGCAGCCACAACTGCAGCTTGTTGCTGGTTGAATGGAAAGATGAATGCCGGGCCTTGCAGCATGTTCGGCACGGGACCGGGTTGTTGTGCTTCATGAGCCGGAGGTTGCTTTCTTTGGCTTGACTCAGCAACAGCAGCATTGTTCATTGCTGCTTTATCCTTTGATAGACTCCCCTGGAAAGGAGAGGTAGCCATTGAAGGAGCCTTGGCTTCTTGCAGGGGGGCGTGGGCCCTCACAGGGTAGCTCCCCTGCATTGGATTCACAAGAAGGGAGGCAGCCTCCGCTGGCGGCACCACACCCATGTTGAATGGTCGTGGACCAAAGAATGGCGCCGCCGATCTACTGGCGGCGGCGGCTGCCGCTGCTGCCGTCGCCGGTGTCCAGAAGTTCTGCATCTTTGCTGTCACTTGCTGGTTGTACCTGATCTGCTGAGCGATGAAACAATGCGTAGCACAGCGCTTTGGCCGTACTGGAGGTAGCAATGCAGCATGCTGTAATCCAGCAGAAGACCCTGGCTTGACATCCATAGGATGATGAAGACCAGCAGCTGATAGTGCCGGTACAGGACCGAGGTAACCAAATGGTGGAAAACTCCCCAGCCAACTTCCAACAGGTATCGGCATAGGTGGTGTAACAGCAGGCATTGCAGATTTTTCATGCTTTATCTCATTCTTAGGTTTCTGTTGCTGCAATGCCGGCTGTGGCCGTCGTTCTGATGGGGACTTTTCGTCACCAAGGCTGGGCTTCTCCAAATCCAATTGCAGCGTGAGTTTCTTTGGAGCAACCTCATCCGCTGGCATCCTCTGCACCATCTTATCATCCTCCAAATTGATCTCCAGCCCTCTCCGTGGCCTCTCTGCGTCTTTCTTTTCGGAATTTCCTCTCGCAGCCATGTCCATCTCAGAATCCAATCCCTTCTTATCCACATCAGGGTCGGAAGCACCATCTCTATCAGGAGACTTCCCAGGAGGAGGAGCCATGAGATCAATGCAAAACTTTTCTTGCCGAGCTCCATCAGATGCCAGCTCAATCTTTGTCGCGGCGGTGGCCTCGCCGTTCCTAGCCTCGGAGACGACCGCCGCCGATTCACCATCCGGCTTGCCTGAGGGCTGCGCCGGCGGCGTCGGCTCTGCCCGGCTCTCCGGCCTGTGATCCCGGCGATCTGATTCGCCTGGCCGGAGCTCCGAATCTCGACTCCTATGGTCCTCCCTCTTCTCCTGCTCCCGCATAGCCTCGTGCTGCGCACCAGCGGTGGCGGTGGTGGTGCCACTGTCGGTAGCGGCCGACACCGACGCCTTTGCATCCGATCTTGATGCCGGAAGCGTCTCTGGCCTCGAGGACGGCTCAGCCAAGTCTGGCTTCGCCGGGCTCGCTGGCCGGACATCGTCGTCGTACTTGACGAGCCGTGGCCGCTTCCTCTTTGGCGCTATTGTAGCAACGGATGTCGAATCGGATGGCCGTGCAACCGAGGACGACGGGGCCGGCGAGGAGTTCCCGGACTTGGCCTCCGGGGCGTCCCTGACCTCCAGCTTGTGGTTGCTCTCCACTGGCTTGGAAGGACACGGGAACTGCCTCGTGAGGCCGAAGAGAACTTCGGCGACCTCGATCTCCTCCTGAATGAAAGACGGCGACTTCGAAATCTTCGGCGGGGGAGGCTGCGGTGGCGCTGTCGACGGAGCTGATGCCGGCGAAGGCCGCTGCTTGGGTGCTTGCCCTGAAGCGCCGCTGCTCCCACTGCCACCAAGATGTTTCAGCTTCTTCCTTGCAGGTCCGGTGGTAGAGCCGGACGCTGGAGAGATCGGCCGTGAGGACGGCCGCTGGATCTGTGAGGTGTCTCCAGCGACGCTACCGCTGCCGCCGCCGCCGCTGCTTCCACCGCCGGGGACCGACCACTCGTGCGAACTCCTCTTTGTAGAAGCTGACCGAGCCTTCCTCGGAACCGGCACGCCGATCATTTCGTCGGCGGCCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0386000.1 | 7 | 23051129 | G | A |
| Osa07LNT0386000.1 | 7 | 23051408 | A | C |
| Osa07LNT0386000.1 | 7 | 23054875 | A | C |
| Osa07LNT0386000.1 | 7 | 23055254 | C | A |
| Osa07LNT0386000.1 | 7 | 23055306 | A | G |
| Osa07LNT0386000.1 | 7 | 23055310 | G | A |
| Osa07LNT0386000.1 | 7 | 23055511 | A | G |
| Osa07LNT0386000.1 | 7 | 23055634 | T | C |
| Osa07LNT0386000.1 | 7 | 23052751 | G | A |
| Osa07LNT0386000.1 | 7 | 23051636 | G | A |
| Osa07LNT0386000.1 | 7 | 23052266 | C | T |
| Osa07LNT0386000.1 | 7 | 23052515 | T | C |
| Osa07LNT0386000.1 | 7 | 23053581 | C | G |
| Osa07LNT0386000.1 | 7 | 23054061 | T | C |
| Osa07LNT0386000.1 | 7 | 23054681 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0386000.1 | osa-miR5530 | Translation | 5.0 | 13.303 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR156b-3p | Translation | 4.0 | 22.653 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395b | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395d | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395e | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395g | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395h | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395i | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395j | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395k | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395l | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395s | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395c | Cleavage | 4.5 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR399i | Translation | 5.0 | 23.736 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR159a.2 | Cleavage | 4.0 | 23.155 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR172a | Cleavage | 5.0 | 24.052 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR172b | Cleavage | 5.0 | 24.052 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR172c | Cleavage | 4.5 | 24.052 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR408-5p | Cleavage | 4.0 | 19.055 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR172d-5p | Cleavage | 3.5 | 18.209 | 1 | 20 |
| Osa07LNT0386000.1 | osa-miR172d-5p | Translation | 5.0 | 23.75 | 1 | 20 |
| Osa07LNT0386000.1 | osa-miR172d-3p | Cleavage | 5.0 | 24.052 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395m | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395n | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395o | Cleavage | 4.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395p | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395q | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395w | Cleavage | 4.0 | 20.81 | 1 | 22 |
| Osa07LNT0386000.1 | osa-miR395r | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR1423-3p | Translation | 5.0 | 23.112 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR1858a | Cleavage | 4.5 | 13.397 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR1858b | Cleavage | 4.5 | 13.397 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR2092-3p | Cleavage | 4.0 | 19.254 | 1 | 22 |
| Osa07LNT0386000.1 | osa-miR2093-3p | Cleavage | 4.0 | 14.287 | 1 | 20 |
| Osa07LNT0386000.1 | osa-miR2863a | Cleavage | 5.0 | 11.284 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR2868 | Cleavage | 5.0 | 14.235 | 1 | 20 |
| Osa07LNT0386000.1 | osa-miR395x | Cleavage | 4.0 | 10.439 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR395y | Cleavage | 5.0 | 20.224 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR3979-5p | Translation | 4.0 | 19.08 | 1 | 20 |
| Osa07LNT0386000.1 | osa-miR5491 | Cleavage | 4.5 | 22.154 | 1 | 21 |
| Osa07LNT0386000.1 | osa-miR5523 | Cleavage | 5.0 | 17.994 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0386000.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0386000.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386000.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0386000.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0386000.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386000.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0386000.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0386000.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)