© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0386400.1
AGCTGCCGCAAGTTGGGTGAATCATCCTTTCGTATTTGTACAAACTACAGATAATGCTCCAAAGAACTACAGATAATGATATGACATACTTGTTTGTCAGAAAATGTTTGCTACGTGGTAGCACATACGCTCTTCGCTATAGTAGGCTGAAATGAATTAGGAGTAAGAAATAAATGGCAAGCATCTGGGGACGGGCAAAAGAGAGCTTCAAATCATCAGTCAAGCGGTCAAAACTTCAGTAGATCTGCATTGATCGTCGGCTGGTTGGCTCGGCTTGGAGGTAAAGTCCGAAATCCATCAAGAAGTTGGCTCAAGACTCAAGAGTAGTCAGATGGTCAAGAATGAATCTCTTCTCCGGCATTCTGCAGTAGTACCAACGGTGCCACCCAAAAATCATTCTATGCTGCCACTTGCCGATACTTCAAAAGATGAAGCCATGAAAGTAAAGCTCATTTCTGCGGTTGTGGTTTCCCAACTGAATGCAGATATACGGAGACAGAAACAACCGTAGATCCGAGGAAGAAAGCAAGGGATAGATGGAAGCCAAACAAAAAGACAGATACAACTGCTGTAAGAAGCATGGCAACTGAAGTTGAGTACACCTTGACAATATTGTCAGCATATTTCATCACCATTGATACAGCAATGCCACTGCAAAGCAAAAAAAAAGTAAAACAATACAATGTGGTATATAAACCTCAAAAGAGAGCAGACAAAACAGGATCCAGCTATTAGTACCTGAGTGCATGATTAAGAATCATCAAAACAGTAATGAATGAGTAGCCATGAAAAAAACCTTTATTCATGACAGCATCGAAGTCCTGAACACAAATTGCAACTAAATTGAAGAGCATTCCAAAAATGTACAGCCAAAAATTCTGCACATTGATGTTTCTTGAAGGACGTTTCTTGATGATTGCTTCTGTGTATACCCCCGCAAAACCACTTAGAAGAGCCATCACAATTGCCATCACCCAACCTTGAATAGGGGTTTGCAGAACATGATCTGACGAGGGGTTCAGCTGGGCTGTAGTGCAACCGGCACATAAAAGAATAAATGCAGCCCACTGAATTTCACTTAACTTTTTCTTTAGAATGATGCGGTATAACACACCCGTGCTAATAATGTTCAGGTTCTTCAGGATTTGATAAGCTGGTGCATCCACATATGCAAAGATGTAATACTGCAGTAAATTCTTTACCATGTAAAGTATGGCAGGAATAGGATAAACACTAACTTCATCAAACGATGTACTTAACCTATTATCTTCTGTAACACCCTGACTGTTCCATGTTCTGTACAGGGCTATGAGAGATAACAGACATTTTAAAGCTTCCACCGAAAAATTTGCCGTAGTGACACTATATTCATATTTTCCAGCTCTTTTCGACCACACAATTAGTATTGCCTGAGAACTTGTTAGTAATGTCAATGCAAGTGTAACAATGGACTTTAACTTCCAACTATTCTTGCCCTTTGAAGCTCCTGCTGTGCTAAGACTGGAGGTTGCTGAAGTGCTAGAAAGAGACCTCTCACCAGGGCTTTCTATGTCTTTCTGAGATACAACATCATAGCTCTCCTGGTCCTTCACTCTCCTGTACTCCATCTCTTCCTCTCGACTCCCCACCTCGTCCCCGCCGCCGACGCCGCTGCCGTCGCCGCCGCTGCGGGTTGCTTCCACGGGGAGGAAGGAATCGGCGGGAGGCGGAGCCGGTGACGTGACGGAGGCTGAAAGGTGGGCCCTCCTGCGCGAGCAGAGAGCAGTAAAGGAGCACGCGGCGAGGCCGCGAGGGTGGCGACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0386400.1 | 7 | 23187739 | A | G |
| Osa07LNT0386400.1 | 7 | 23187820 | A | G |
| Osa07LNT0386400.1 | 7 | 23188786 | C | T |
| Osa07LNT0386400.1 | 7 | 23188848 | T | C |
| Osa07LNT0386400.1 | 7 | 23188850 | G | T |
| Osa07LNT0386400.1 | 7 | 23190045 | A | G |
| Osa07LNT0386400.1 | 7 | 23190539 | G | A |
| Osa07LNT0386400.1 | 7 | 23191611 | T | C |
| Osa07LNT0386400.1 | 7 | 23191618 | T | A |
| Osa07LNT0386400.1 | 7 | 23191767 | C | A |
| Osa07LNT0386400.1 | 7 | 23189868 | A | C |
| Osa07LNT0386400.1 | 7 | 23187724 | T | A |
| Osa07LNT0386400.1 | 7 | 23188449 | C | T |
| Osa07LNT0386400.1 | 7 | 23189583 | A | C |
| Osa07LNT0386400.1 | 7 | 23191463 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0386400.1 | osa-miR5793 | Cleavage | 5.0 | 13.839 | 1 | 21 |
| Osa07LNT0386400.1 | osa-miR5143b | Cleavage | 4.0 | 15.321 | 1 | 24 |
| Osa07LNT0386400.1 | osa-miR399e | Translation | 5.0 | 16.783 | 1 | 21 |
| Osa07LNT0386400.1 | osa-miR399f | Translation | 5.0 | 16.783 | 1 | 21 |
| Osa07LNT0386400.1 | osa-miR399g | Translation | 5.0 | 16.783 | 1 | 21 |
| Osa07LNT0386400.1 | osa-miR529b | Translation | 4.0 | 9.973 | 1 | 21 |
| Osa07LNT0386400.1 | osa-miR2866 | Cleavage | 4.0 | 15.793 | 1 | 20 |
| Osa07LNT0386400.1 | osa-miR2866 | Translation | 5.0 | 12.37 | 1 | 20 |
| Osa07LNT0386400.1 | osa-miR5143a | Cleavage | 4.0 | 15.321 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0386400.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0386400.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0386400.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0386400.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0386400.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386400.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0386400.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386400.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)