© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0386600.1
TGTGTGCCTCCCTCGCCGCCGCCGCCGCCGGGGGCGGTTCCCTACTCTGCCTCCCCCACCACGCCTCCCACATCGCGCCGCCCCCATCGCCGCGCCCCCACAACGCCTCCACCGTCGGCACCCCCATCGCGACACCCCTGAGCTCTGCATCGCCGCCGACCGCCGCTCCTGCTCGCCCTCATCTACGACGCCGCCGTCACTACCCTCTCTTCGCTGCGCTGCCTCCCTCCCCGGCGTCCCCATCCCCTCCTCGCCGCGCCACTTCCCCATCTGCCGCCCCGCCTGCTTACCTCCCCGGCGTCCCCATCCCTTCCTCGCCACGTCGCTTCCCCATTCACCGCCCCCGCTGCACGCCTCACGCCGCAACCCCGCAGCGGAACCCACCGGCGAGCTAACCGCCGTCCCGGCAGGTCGCCGTCAATCGCCGTCGCCCCGCAGGTCGGCGTTGCACTGCAGAGGGATTTCCCCGCCGAACGGTCGCCGCAGCAGGTCTACGCCACCTTCTTCCCACGCCGACTCCATGTCTAATCCCTACCTCACCACAGTTTCAACTTGTGGTTCCAGCTGAAGCAATTGGAGATTTATTAAATCTAAGGCTACATGCTAGGCTGCTATGAGATGTAGATCAAATAGGCTATCCTATTAGATGGTTATTGAGCAAGCATGTTTATACCAAACAGTCATTTTGTTTGTTGCTGGAACTATCAGGTTGCCATATAGGCATGCTAAAAAACCGTCAGGAAGTGTACAAGCTTACAAGCTGTAAATAAACGGAATGAAGAGCAATAGATCATCTGTTAGGTTGCCTTCGGTTTTGAACAAGCGCTATAAGGTGGTCGAAGAAATTCTATTATTTTATTTACCATTGATTGGCTATCTGTTGATGCTTTTATTATTCAACCAAACTGGTGGAGGAGCCAAGGTCACAGTAATCTTATTAAAGGTAGTACGTACTTATAGAACCTCCATTTTCATCGGTACATGTGAGAGTGAGCTTTAATAATGTATTCCATGATGAAATGTATTCCATAGCATTAGGATTGGATGCTACAGGGAGACAAATCTCGGCTGTGTCATGTATTCCATGATGCAAAGTTGATGTTGGCTATTGTCTCGGCGTTTCGAATAAAGATTGTTAGGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0386600.1 | 7 | 23219754 | A | G |
| Osa07LNT0386600.1 | 7 | 23217318 | T | C |
| Osa07LNT0386600.1 | 7 | 23217475 | T | C |
| Osa07LNT0386600.1 | 7 | 23217476 | T | C |
| Osa07LNT0386600.1 | 7 | 23218982 | A | G |
| Osa07LNT0386600.1 | 7 | 23219323 | C | A |
| Osa07LNT0386600.1 | 7 | 23219582 | T | A |
| Osa07LNT0386600.1 | 7 | 23220425 | A | T |
| Osa07LNT0386600.1 | 7 | 23220426 | T | C |
| Osa07LNT0386600.1 | 7 | 23220429 | G | A |
| Osa07LNT0386600.1 | 7 | 23220487 | T | A |
| Osa07LNT0386600.1 | 7 | 23220673 | C | T |
| Osa07LNT0386600.1 | 7 | 23220735 | A | G |
| Osa07LNT0386600.1 | 7 | 23219960 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0386600.1 | osa-miR5532 | Cleavage | 2.5 | 22.628 | 1 | 22 |
| Osa07LNT0386600.1 | osa-miR5532 | Cleavage | 4.0 | 15.235 | 1 | 22 |
| Osa07LNT0386600.1 | osa-miR5540 | Cleavage | 4.5 | 20.643 | 1 | 21 |
| Osa07LNT0386600.1 | osa-miR159f | Translation | 4.5 | 17.379 | 1 | 21 |
| Osa07LNT0386600.1 | osa-miR2104 | Cleavage | 4.5 | 12.683 | 1 | 22 |
| Osa07LNT0386600.1 | osa-miR2104 | Cleavage | 5.0 | 10.316 | 1 | 22 |
| Osa07LNT0386600.1 | osa-miR2104 | Cleavage | 5.0 | 23.376 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0386600.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386600.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0386600.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0386600.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0386600.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0386600.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0386600.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386600.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)