© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0386700.1
TATGAAAAAGGGCACAATAAACCCAATCACTGAAACCACTGCCGGTGTTTCATGAGATCTATTTGAAATGAATCAAACTCAACAAATTTGACTATATAAGAACATTTATACTACTATATAAGCTCAACTAAATGAATTCTATGCGTACAACAGATGCAAGTGTCGCGCAAAATTTTCAATCTAACAGAAGAAAATTAGAAGATTACACAGGAGGTGATGCAGTGGATTGCAAATACTCTTACCAAATTTAGACAGTACAGGTGATAGCGCCATGGACAAGTGTACATGAACTGATCTCCAACTTCACCCCCACAGTCTCATTCCTCCAAAACAAAAAGCTTGATCACACAAGGGAAATAAACAAGGCAGCCAATCTCTTCCGTCCCTTGGAGTGCCGATCGTATTGACCAAAGATCAGCGCTGATCTCCACCAGCGCCAACATCCATGCCAAGTTGTCATAAGACAGGCTTATAGAATGCAAGGGGAACTTGGAATCACTGATTTCGAAGTGGCGGAGAGAAGAATTGTAGATGGCAGAGGCGTCGAGTGGCGGCTGCCCCTGCTTATGGCAATGGCATTCAGATCACTTGCAAACATGTGCCTATGGCAAATGGGAGCTGCAGAGTAGTACATGTAGCACTAGATGGTGACTGAAGAAGACCCAACACAACCATGATATCGACCATAATGCCCTGGAGAGGGGTGCTCAAGCATGATATCGACCATAAGCATGCACTCAATCTTTTGAAGACATCCTGAATCACCAAAAATCTCCGCATGAACAATTCCCATCCTTAAATCGGTGGAATCTGTTTACATCACGGACAACAATCTCCCTTGCAACTATCTTTGAAATAAATTTTGTTGCTATATGGCAGTCAACACAAACTCGGAGGTTCTTCATCACACGTATTGTTGTTCCAGGTGGCGTGCTAATAATACCAAATACTATTGCAAGTTTCTCACTATGGCCACATAACACCTCTCTCTTCTGCTCTTCTTCAATGTCCTGTAAAACATCCTCCATATTGGGCACATATCCTTGACGAATCATCTGCTCTGAGTAAACATTCAGTGCATCAATAATCCTATCGTACCAGGGATGGGACTTATCATGAGCTATGAACACATGCAATTTGTTCTTCACTTCAATCCAACTGCAAGCTGGTTCCTTCTTCATACCTTTGATTCTCATAGATTTCCGCAGCTGTGCTGCTTCATTCCATCTCCCAGAAGCCGAATACATGTTTGACAAAATTACATGAGATCCCATGCTTTTAGGTTCAAGCTCAAAGATCTTCTTGGCCACTTCCTCAGCTAAAACAGTGTTTTTATGGACCCTGCAAGCCCTTAACAAGGTGGACCAGACGCTTGAAGTTGGTTTTATTTTCATTTCAGAGATGAAATTATATGCTTCATCTAAATCTCCTGCACGACCAAGGGTGTCTGCAAGTGCAGCACAATGCTCAAGGGATGGAACAAATCCATACTGGTTAGACATACTGTTAAAATACTTCCATCCATTGTCCACCAACCCAGCATGACTACATGCAGTCAAAACTGCTAGAAAAGTTATATGATTAGGCTTCACATTTCCCAACTCCATTCTCTCAAACAGCACAAAAGCCTCTGTTGTTGGACCGTGCAATGCATAACCCATGATCATCGCAGTCCATGATACGATGTCAGGTGATTGTATCCCATTAAAAACGCGACGAGCTATGTCAACATTCCCACACTTGCAATACATGTCAATAAGGGAGCTAGATATAAATATGTTATCATTAAATCTGGCACGGATCAAATAGGCATGCAGCTGCTTCCCAAGACGCAACAATGACAAATTGCCAAAGGCAGGTATTAGGCTTGAGAAAGTCACAGGCACGGGCCTCACTCCAGCTTGCAGCATCCGACGGAATATTCCAAGAGCCTCCTCAACTGACCCATTTTGTGCATAACCTGCAAGCATTGAGTTCCACAGAACTGCATCACAGTCTGAGAAGCTGTCGAACACCTTCATAGAGTAATCCATTTGAGTGCAGTTAGCATACATATCAATCAAGCTACTTCCAACAAAAACATCATTGTCAAATCCATTCTTGATAGCATACCCATGGACCACCATGCCTCTCTTGATATCAGCGCACTCCGCAAAGATTGGCAGCACAGTTGACAGTGTAAACGTGTCAGGCATAAATCCATCCCTCCACATCTCCCTAACCATGCTCAGAGCTTCTTGGTGCCTCTTGTGCTCTGCACATCCCAATATCAAAGTGTTCCAAGACACGGCATCCCTCTCGAGCATTTCATCAAACACTTTCCGCATGCTCTCATATGCAGCTGATTCCAGGCCTCCTTCCCCAGAAGGCCCATTTGTCCCAAAGGGGTGATGAAAACCTGGGAGCTTGATGCAGAGGTTGAGGAGGGCATTGGCGGTAAAGCGGTCAGCGAAGGAACCGGAGCGGATGGCGAGAGCATGGAGAGATGCAGCAAGAGTGCAGAGGCCAAGGCCGGCGCAGGACTTGAGTGCAGCAGGGAGGGAGGCCGGAACAGATGATCGGGGCGCAACAGAGGCACGCATTTGTAGGAAGAGAGAGATGGCGTGGAGAAATTGGCCCTGGGAAGCAGCCATACGGATCTGATAGGCCCATGACGGTGGGAAATGTGGAGAAGCAACCGCAGCAAGAGACATTATGTAGCAGTTGCTGTGGCTCCGATGAGAGCTGACTGCAATCAGAAGAGCAGGTCGAGGTTCTGCAACCGGAGTGTCAGCTCAGGCAGTGGGTGGGGGTGGCAAGCATCCGGTGAGAAAACTTGAAGGCAAGGCCCAGTTGTCAGCTTCGTGTGCTACCTATTTTCACTTTCAGTGCCAGCAACTGCCTCTTGATGCTCTTTCTTGTGATTGCTACCAAGTTTCTCAACAGCCAGTAGTGGATGTAGAATTGCACGGCTCAGAACTCTCACAACAATCAGATGGTCCTCGGCCGTAGGTCCGTCCTGGGCTCCGAGCCGTGGCCACGCCGCAGCGCCCGCGCCCTAGCAGCTAGGAGTTGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0386700.1 | 7 | 23425357 | A | C |
| Osa07LNT0386700.1 | 7 | 23426827 | C | T |
| Osa07LNT0386700.1 | 7 | 23428452 | T | C |
| Osa07LNT0386700.1 | 7 | 23428478 | T | C |
| Osa07LNT0386700.1 | 7 | 23428512 | A | C |
| Osa07LNT0386700.1 | 7 | 23428780 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0386700.1 | osa-miR5525 | Translation | 5.0 | 13.813 | 1 | 22 |
| Osa07LNT0386700.1 | osa-miR5532 | Cleavage | 5.0 | 14.569 | 1 | 22 |
| Osa07LNT0386700.1 | osa-miR5541 | Translation | 4.5 | 16.131 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR5542 | Cleavage | 5.0 | 12.739 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR166b-5p | Translation | 4.5 | 11.29 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR166d-5p | Translation | 4.5 | 11.29 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR166h-5p | Translation | 4.0 | 11.29 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR426 | Cleavage | 4.5 | 17.045 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR815a | Translation | 3.5 | 16.032 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR815b | Translation | 3.5 | 16.032 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR815c | Translation | 3.5 | 16.032 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR1855 | Translation | 4.5 | 21.259 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR1856 | Cleavage | 5.0 | 13.133 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR1860-5p | Cleavage | 5.0 | 20.741 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR2118f | Translation | 5.0 | 16.829 | 1 | 22 |
| Osa07LNT0386700.1 | osa-miR2118j | Translation | 5.0 | 16.829 | 1 | 22 |
| Osa07LNT0386700.1 | osa-miR2118m | Translation | 5.0 | 16.829 | 1 | 22 |
| Osa07LNT0386700.1 | osa-miR2864.2 | Cleavage | 4.5 | 16.848 | 1 | 21 |
| Osa07LNT0386700.1 | osa-miR1862f | Cleavage | 4.5 | 11.959 | 1 | 20 |
| Osa07LNT0386700.1 | osa-miR1862g | Cleavage | 4.5 | 11.959 | 1 | 20 |
| Osa07LNT0386700.1 | osa-miR5150-5p | Translation | 4.5 | 19.54 | 1 | 24 |
| Osa07LNT0386700.1 | osa-miR5490 | Cleavage | 5.0 | 16.41 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0386700.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386700.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0386700.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0386700.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0386700.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0386700.1 | 7 | nan | Others | Others | RZ395 | RZ264 |
| Osa07LNT0386700.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0386700.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0386700.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)