© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0387600.1
GTGCGCTGACCACGCTGGACTAGCGCTCCTCCTCGCCCCGCCTCAGTCCAACGCTGCTCCCGCCGGCGCTCCGCCTCCTCCGCCCTCTTCCTCCTCGCCGGAACCGATTTCGTCCCCTTCCGGCGTCGCCGGCGGCTTTTCCCGCCGGTGCTCCTCCTCCGCCCTATTCCTCCTCACATTCCCCGTTCGCGCCGCCGGAGGGTCGTCCCCTTCCACCGACACCGCCGTACTCCACCGATGCCCTCGCCGGAATCGATTTCTTCCCTTTCCGCCGTCGCCGCAATCCACTTCATAGGTTCATCTTGCGCTGATTGGTTCCCGTCAGATTTGAGTAGGAACTAAAGGAACCAACACTGTTCCCCCTGAACCCTAAGTTGATCCTGTGCAGCCCCTATCAATGGATTTGCAGCCGTGGTGCGAAGGCATCGTATCCCCTCATGGCGTTGCAATCCCAGTAGGAGCTTGCCATCGGCCACATCTGGCGTTTCACAATCCTGCTACCGCTGATTTTCAGATGATTTCACGAGCGTGTAGACAACAGCAATTATCAAACAAGGTTCATCCCTAAATCAGGGAGCTTCTTTGGTATACGCAGGGAGCATCAGTACTGTCTAATATTGCACCAATGTTATCATTGAAGCAAAACCAGTTTTATTGTGTTTCAGTGCTGCAATCGATCTAAAGCAATACCTTGAAGTACATTTTGTATATTGTCTAATGCCTCTCCCTGGACATAAAGGGATGAACTTCGTAAACTATTTGCAGGGACAAGATGAGCAAGCAGCTAACCATTTCATTAAAATTGAGGTCTTTGTTGTTTGCATGGATATGAACTGAAGAATTGAGATCTTTGTTGTTTGCATGGATATGAATTGAAGAAGGATAATATTATACTCTTGGAGTTCCCAAAAGGACAGTGCAATGGCCGATGAAGGCATTCTTTGATGCTCTGTCTACTAAGTTAAACTAAGGTGTAGTATCCTGTGATGGAATTGCAGTTGCGGATACTACAAGTGCTGCAGCTGATGTACATGAGTACAAAAAGACCAGAATGTGTTAAGATAACGACTGCACTGCGACTAAAGATGTCAATTCAAATTATTCCTGACCTGAATGAATTATCTGGAATTAGGTCCACAGTCTTGGAGCACCAGTATCTTCGATCTTTCACTGGAGGTTTGCTTTTTCACGTGTAATTAAAATGTTGCACTGCATCTTACAAAATTATCACTCTAGGAAGCTTACTTTTTGTATGTCAGAATTTGTTTGATCGTTTTCTCCAAGAAGCTTACTATTTGTATGTTCTCAGCCAATTTTTGCATTTACTGTCTGGTTAGACAATTACCCGTTGCAGAGCAGGTGTCCATAATGGAGAGGTTATTATATTTTTCCTTTTGCACAATTCTGTTTCCAAAGTATTTAAATTGTGCCTGTACAATTTGTTCACAGGCAAGTTCACACTTTTTTAATTTAGTTCAGATCTTAGTTTCCATCTGAATATATGGTGCACCATAGCCGTGGAAAACGGTATATACAGCTCTATAGCAAGAATTTGTTGGATTCATGCTATTGATACTTGGCTCGGTCAATTTATTTTACATGTGCAAGGGAGATCAGGTGCATATGCAGTGAGAAGAGTCAACAGAAAGGAATGAGGAGTAATGAGGCTTGAAGGAATAATAATATGCAAGATCAACTCTGGATTTAGACTTCTTTGGCCAAGCACTATGGCTAAAATGGCATGCCAAGCTTGGAATAGAAAGGTCAAGCAATTTTTCCAACCACGGTGCAGCACGTGGCAATGGCACTAACACTAATTTCTATCATATGTAGGCAGATCCAAGTTGATGCTGGCACAGGCTTTGGTGAATCACTGATGGGTGAGAGACCTGTAGAGTTCCTTGTCCAACAGAGCAATGGTTGAGTTCTTTCAGTTGTGGGATGAAATTCAGATGGTGTAGCTTCAACCAGGAATAGCCACGACTCCATTCGGTGGTAGCTAACAGGTGGGAGCTATTTGACTTGTGTGGCTAGAAGTATTCGAGTCAATCATCTGCTTGCCTCGGCCTACTTCAATAGACAACGGAGGATGCTCTACATCATAATCGTATGCAAAGACAGCAGTTAATTGCATTGTATCACACGTTCATTACAAGATACTCAAAGCAAAAAACGGCAATATGTTGGTTAGCTGCTTGCACTTGCAATGAGTAAGAGCATAGAGGTTCTGGACTTACAATCTGAGGTTACAAAAAATGCATGAAAAACGTGTAGGCTGTCGAAGCAAATCCATCAGGAGGACACCATGGCATCTGATGTTGTCTACTATGCATTAAAGAGATTACTGGTTGTTTCTATTCCTTCTTTTTGGTTGAAATAATTTACGTTAATATAATGTTTTCATAGAAGTGAGCCAATCTTGATTTGTTTGGTTAACACGGGTTATGTGTTGAACGTGTGATCCAATAGTATGGCTTTGTTACGTTCTCTTATCAGCTAATTGTAAGTCCTTAGCAGCTGGAATGCTGGATCATGACTAACAAGTGAAAAGGATCAGTGATAGTTTTATGCTGGTGCAGACATGCAATGCCAAATAAAACATGGATAATTCCTTCTTGTTTGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0387600.1 | 7 | 24119352 | T | G |
| Osa07LNT0387600.1 | 7 | 24119582 | A | T |
| Osa07LNT0387600.1 | 7 | 24120036 | T | C |
| Osa07LNT0387600.1 | 7 | 24120955 | C | T |
| Osa07LNT0387600.1 | 7 | 24121392 | A | G |
| Osa07LNT0387600.1 | 7 | 24122300 | T | C |
| Osa07LNT0387600.1 | 7 | 24122302 | G | A |
| Osa07LNT0387600.1 | 7 | 24122539 | T | C |
| Osa07LNT0387600.1 | 7 | 24122663 | C | T |
| Osa07LNT0387600.1 | 7 | 24122799 | T | C |
| Osa07LNT0387600.1 | 7 | 24123524 | T | C |
| Osa07LNT0387600.1 | 7 | 24123888 | T | C |
| Osa07LNT0387600.1 | 7 | 24124032 | A | C |
| Osa07LNT0387600.1 | 7 | 24124474 | G | A |
| Osa07LNT0387600.1 | 7 | 24124957 | T | C |
| Osa07LNT0387600.1 | 7 | 24122248 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0387600.1 | osa-miR5837.2 | Cleavage | 5.0 | 13.213 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR397a | Cleavage | 5.0 | 12.789 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR397b | Cleavage | 5.0 | 12.789 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR171e-5p | Translation | 4.5 | 21.236 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR437 | Cleavage | 4.5 | 16.034 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR1425-5p | Cleavage | 4.5 | 19.199 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR444b.2 | Cleavage | 4.0 | 13.935 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR444c.2 | Cleavage | 4.0 | 13.935 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR1879 | Cleavage | 4.0 | 16.947 | 1 | 24 |
| Osa07LNT0387600.1 | osa-miR2092-3p | Cleavage | 5.0 | 17.886 | 1 | 22 |
| Osa07LNT0387600.1 | osa-miR2905 | Cleavage | 5.0 | 15.507 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR2905 | Cleavage | 5.0 | 11.006 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR5498 | Translation | 4.0 | 24.361 | 1 | 21 |
| Osa07LNT0387600.1 | osa-miR1872 | Translation | 5.0 | 20.834 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0387600.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0387600.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | C451 | R1245 |
| Osa07LNT0387600.1 | 7 | nan | Others | Others | RZ395 | RZ264 |
| Osa07LNT0387600.1 | 7 | qPH7-2 | Morphological trait | Dwarf | RZ626 | RG650 |
| Osa07LNT0387600.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0387600.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0387600.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0387600.1 | 7 | qLCC-7 | Physiological trait | Source activity | R2394 | R2677 |
| Osa07LNT0387600.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0387600.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0387600.1 | 7 | qCDS-7 | Physiological trait | Source activity | R2394 | R2677 |
| Osa07LNT0387600.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)