© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0388500.1
CACGGGGACCATCAGTTTCAGGGTTTCAACTTAGAGTTCAGTATTAGATACAGCAAGTACAGATATAAGCATCCACAAACAGAACCAACAGTCAGTTGATCATTGCAGTGCTTTTAGTTACAGGAAAACTTAAAATGGAGCCACACATGTTTGGTCCATTTGAGGATGAAACTACTTTTTTTTTTCCCATAAGGTATTTTCATAAGCCAAGGATGAATTGCCACCAGCAGGGAGAGAGCCAAAGTGATGGTGCTGAGCTGAACCCACTTCACCCCTCTTCACCTCACCTCATCATGGAAACGCGCTGGTGAATGGCGTTCGCGACCAGCTTCCCATCTCCGCCATTCTGCGCTCTGAAGCTCATTGTGGGAAGGAAGCCAGCTGAGGGGAAGTGGCTCTGCTCATGGTTACCAAGGAATTCTCTGCTGGTTGAGACGCTCGCGATTTCAGAGGGAGAGGAAGCTGAAGGCGCGCTACCGGTGCCATTCTGAAGGCATGTCCTATTGCCAGAGCTCGCGCCACCGGATGCGGCCTCCTCCTCCTGTTGCTGCTTCTGCTCCTCGAGCTGCTTTGTGTTGAGGAAGCGCCCTCCAGATCCACGAGCTCGCTTCATGGCATGGCGATGCCGAGATTCATGGAGGTATGGCTTCCGACCTTTCACCAACTTATTTTGGGCCTCCAATTTAGCTCGTATCTGTCTCCTCCTAAGAATTGCATGGTACTGCTTTGCGTTTACAAATATTGGCTCTTCTGCTGCAGGCTCAACAGGCAACGGCACCCGGGAGTTAGCTGTACCATTTTGCTGGGGATGAACAATTGCATGTGAAGAATATCCAGTCAAGACCCCACCATAGTATGCATCAGCTGTATAAGGAATACAAGCAAAGGATTGGCTATAGTTGAGCTTTGGAGGCAAAGCTCCTGGATTCCCCAACGATGATACTGACTTTGTTTTGTCCTGATCTGGCATCTGATGACCATCATCATTGTCAGATTGTGTTGAGGTATGTCGCTCATTTGGACTGCTATCATTCATGGCAGATTCTTCTTGGTGTGACTGTCCAGAATCGCTTGACGGGGAATCTTGATCATACATCTTATGACCTAACTGCTTCATCTGATAATCTCCAGAGAAAAAATCATAGTTGGGCGTAGTATGGGCTCGATGATCTTCCATTTGTCGCAAAAGCATTAGCATTATGAGATGGTCTCACTTTGGTCCAGGCACCATTTTTCTTCGTGTACTTCTATAATTAGCCTTCAAGACAAGTTGATAACATTAACTTAAGCAAATTGAACTGATAGGGCTTTTAACCTGACCTCTTCAGATTGGTGGGGATTTTGTTGCCCATCAAAGGATTAGCTCTAATCCTTTCTATCAAAAGATGCCTATTAAAGGTTTCTACTCATTAACTGGAATATGATTATGCATAGTTACTTTCAGGTGTTGAATTATCTAAAAAAAACGACAATAGATGTTGTAATACTGAATAGAGACAGTAGGAAATAACTGAATCATGAGATTCTGAACCATAAAAGCAAATAAATTATGATATTACCTTAATATCATAATAAGGTAATACTTAATAGTGGTACTGTTCAGTAGGAACAGAGTAGGCAGAGTAGGTTGTTAAGTGCTTGTTGCAAGAGTAGGAAATAACTGAATAAAAAAACAAATAAATCAACCTAAAAAGAGTACCACTACAAATAACACACAGCATCCTACCCTAAGTAGACAGACAGAAAATTCTTATATAGAAACAACCTGATCAAGAGGAATAAGCACAAAATGCACATTAGGTAGCTTACATCAGCCTCTTTTTCTTTTTCTCGAATAAGAGGTAGCCTACATCAGTCTCAGGTTTACATTTATTACATGCAGATCATAAAGAGATAACCTACACAACTTTTAGTGGATTGTTCTCGAGTCCAAATTGCCAATCCATATGCACAGAAGAAGTCCCTTGTCTTAATCAGAATAACGATTGAAAAGCTAAACCACTAGTAAATCAGAACATATCGCAGCAAGTTCACACATTCAGAATCTTATCAGAGACACAATCGCTTGATACCGTCACAAATTCACACGGAATTTAGCTTCAAGTTACCAAATCCTGCAATGGGGAAGTCAAATTTCCACCCACTCCACGGCCTAAAACACAACTCACAGTGCATTCGATATACAGTGGTCAGCTAACAACAGGGGATGCATTGACTTCCTCGAAAGGATGCATCTTGCGATGTCTAACTACAACTCCGAAGCAAGCCTAACAAAGAACTGAAATTATGCAACACAAACCAACCAAGAATCAAAAGAAGAAGAAAAAAAGAACCCAAATTTCCGAGGTGGAACAAGGGAGAGAAAAGAAATGGGAAAAAATCGCAGGGGATAAGAACTGGACCAAACACAGCATGTCGTAATCAAGAACCAAGAATCCACTCCATGAAAGGAAAATGGAAGGGACAGCTCTCTGCTACTAGGACGACGCATGCAAGAACACAATTTGGGGATTTCTCCGAGGAGGGAGTAGCGCAGCGGCGCGCATAGAGATGTACCTCTCTCTCCTGTCCCGCTTCGAGCTCCTCTCTTCAAGTCTCCCGAATCCTTTCCGAGATAGAGAGAGAAATTTGTGGGAAAAGAAGCAGAAATGGGGAGCACGGGGAAGAGGAGAGGACTGTGCTCTAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0388500.1 | 7 | 24998968 | A | C |
| Osa07LNT0388500.1 | 7 | 24998814 | T | G |
| Osa07LNT0388500.1 | 7 | 24998035 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0388500.1 | osa-miR5542 | Cleavage | 4.5 | 12.14 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR5823 | Cleavage | 4.5 | 21.582 | 1 | 24 |
| Osa07LNT0388500.1 | osa-miR166a-5p | Cleavage | 4.5 | 13.236 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR166c-5p | Cleavage | 4.5 | 13.236 | 1 | 20 |
| Osa07LNT0388500.1 | osa-miR166d-5p | Cleavage | 5.0 | 13.236 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR166e-5p | Cleavage | 4.5 | 13.236 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR393b-3p | Cleavage | 4.0 | 23.21 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR393b-3p | Translation | 5.0 | 19.582 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR816 | Cleavage | 3.5 | 24.686 | 1 | 20 |
| Osa07LNT0388500.1 | osa-miR1851 | Translation | 4.5 | 13.011 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428b | Translation | 4.5 | 14.336 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428c | Translation | 4.5 | 14.336 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428d | Translation | 4.5 | 14.336 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1861g | Cleavage | 5.0 | 14.391 | 1 | 22 |
| Osa07LNT0388500.1 | osa-miR2097-3p | Translation | 5.0 | 11.901 | 1 | 22 |
| Osa07LNT0388500.1 | osa-miR1862f | Cleavage | 5.0 | 7.536 | 1 | 20 |
| Osa07LNT0388500.1 | osa-miR1862g | Cleavage | 5.0 | 7.536 | 1 | 20 |
| Osa07LNT0388500.1 | osa-miR1428c | Translation | 5.0 | 8.74 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428b | Translation | 5.0 | 8.74 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428d | Translation | 5.0 | 8.74 | 1 | 21 |
| Osa07LNT0388500.1 | osa-miR1428e-3p | Translation | 5.0 | 8.74 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0388500.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0388500.1 | 7 | grb7-2 | Morphological trait | Seed | RM505 | RM336 |
| Osa07LNT0388500.1 | 7 | nan | Physiological trait | Eating quality | R1245 | RM234 |
| Osa07LNT0388500.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0388500.1 | 7 | nan | Physiological trait | Eating quality | R1245 | R1789 |
| Osa07LNT0388500.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0388500.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | R1245 | R1789 |
| Osa07LNT0388500.1 | 7 | nan | Others | Others | RZ395 | RZ264 |
| Osa07LNT0388500.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)