© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0389200.1
TGTTGAATATTTTTGGCATTCCCGGAGTTAATCCATGCTGAGAAGATATTACTAAACATGGTTTTGGGCCTTGGATTACCACAAGTGACGATGAATTTCCTTTGCTGCTAGCAAACATGTTGCGCTGTTAGCGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGAAGATAAATAAGGGGAGAGAAGAGCAGCGGGCTACAAATTTGTAGCCAGCTGTAGCACGGACTCCAAAACGCAGTGTGTATATGACTGATGGGACCAGATATTAATAGTGTAGTATGCAACTATTGTATGAATGAGCTATTAAATTGACTATAGATGAATTGGAGCTAGTAGTTGGCTGTACTATTAAACTTGCTCTTACCTCATTTGCTTTGACGCCTTGGCCCGCCCCTATCCCTATGGAACCAGAGCCGGTTTATAGGATGGCGCCTGTGCAGTGCATGGCTGAGGCCGTGGGGAAATGAGGTCGCAGCCTCACACGCATATGTATACTGCATCTGAAATTTCATGGAATCATCAATAACCAGATCCTTCATTTGGACATCCATAAGCTTCCACAATCCATTGAATCCTCTAGGCCCAGGTTCGGTGCTCACGGGCGAGAGAAACCCAGCTGGACGAAGGTGGCGATGTGGCTGGGTGTCCTCCGGAGCCCTCATCGTTGCTGCCGGTGGAGTGTCCTCCGGAACACCTCGCCGGTCACTGCTCCTCCGGTTGGCCATCAAGCAGATAGCCGCCGCCCACTGGTGCCTCCATCCGCCGCTGCCACAGGTAGAGCACCTCGTCGGTCACTGCTCCGCCGCCTGCAGGTAGAGTGCACACCGACGGTGGAGCACAGTGCCGCGTCGCCTGAAGTCGCCGCCGCTGCCGCGTGCGAGACGAGAGCACACCTAGGGTCAATCCACGTGGACCCTAGGGTTCACTGGGTGTCAGCCCTTTGTTCCCTAAAAATATATGGGCCAACCCAAGAACCTTTTGGTGCCAAATTTTTAGGGTCGGCCAGCGCACCTAATGGGTCGATCTGCCCCCTTTGCAGGCTGAGGTGTAGCATTATATAACACTAACTAAACAGAGACGATTTTGCTATATATTTGTCGACAAATTTTTCCCTAAAAATTTGACAGATGTAATTACAGTACAATCGTAGTGTAATTACACTATAACTTCTATGTAATCACACTGTAACTATAGTGTAACTTGTATGTAACTTTCAAAAATCTCTCCGTAATATGTTATTTCGGTAAAATGGAGGTCGTGGGAACAAATTCTTTCACATATGTGTGTGCTATGATTTGTTTTCTTCCTCACCAAAACAAATCGTGTAATAGATCTAACGATTCAAAATTATGTGAAACTTATATATAAGTTACACTGTAGTTACATGCAAGTTACAGTGTAATTACATATAAGTTACAGTGTAATTACACTACGATTGTACTATAATTACATCTGTCAAATTTTTCGGGAAAAATTTGTCGACAAATGTATAGGTAGTCCCGTTTCGGGAAAAATATGTATAGCTTACATAAAAATTCATGAGTGGACGTCCACATGAGCCACCAATCGTTTATTCGACAAAATCAGCATAACTGGCAAAAAGAAAAAACTTGCAGCTAGCACCTACTCCTATCAATATCCTACATGAGTATTATGATCCATACAAGATCATTCAATTCTTCAACCTACTGAGATGCTTCACAATTTTTTAGAGCTTCAAATTTTATCCATTTGCTTAGTGTGACAATGCTCCAAACAGGGGTCTTGGAAATACATGACATTCTCGACGCATTACAACTTACAAGATAGCATATTGCATATAGTTAAGTTAAGCAACAACTGTTGTATAAAACACTAAGGAATCTGCTCAAGAAATTTCAAGCTTCACAAGGAGACTAAATTAAAGATAACATATGCTGGATTGATTCCATGAAGTTAAGAAACGGTCAGCATGTAACATTGAAAAGTCTGCTATAGAATTTTATACTTCAAATTAGGGGACTAAATTGCATATACTAGAATTAATAGAACATTGAATAAACTACAAACAATCATTATGAACAAAACAAAAGAAAAAAATCAAGATGACCTTCATGGCCTCACACTAAAATATAGTAATGCTTACGTCTATAGAGCAACAAATGGAAGGAGGCATGTCTTGGAACATAATTCCCGGCAGACTTTCTCTGGGAGTCTATTATTGTTTATAGATAAAACTAGATAAAGCACATTTTCCATGCCTTGCATAGATCAATTTCTAGGAACAATATACTGTTGTGTTAGATTAAGACGGCCATCTTACAAAGAAAATGCCATTTATTACTAAATTCCCTAAAATATTCTAAATGATATTTTAGTACTTTACCAAATAGTGCTACAATATTCAGAACACAAATGGGGGCTGTTGGCATCAGATAATTATTAGTGGTAATGGATCAGCTGCCTATATTATACACATAATTATTTGTACCAATTTATACAAATTTACATGATATGTTAATAGGATAGGTGCACAGACCTGAGATGGCTATAACAATCATCACTGCTCCTGAAGTTCTCCAAGCATGCCCAACAAATGTGACTGCCACATTTACACTCGACATGGTTGCAACCATCAGCTTTCTCGATTGTAAAGTGGCAAGAAGGGCATACCTTCACATTCTCCTTCCCCTTGCGCCATTCAAGCAGAGTTGCATCAGGGTCTTCCTTGTATTCTTTGTATGCCTCACAGGATATGAAAGGATGATATTCAAGATGACACTTGTTGCAGATCTCCACAAAGCAAGCCCCACAGACAAAAGGTTTGCTTTCAGCATCTGCAGCAGCCACTTGGTAAATGGATGGGCAATCAGGAGTAGGACAGAAACGATATTTTCCTGCATTAGAAGCAACAAATGCTCTCAAGGAGGCTCTAAATAGCTCTTCCAGTTTCTCGCTCGATAGGAGAGATCTCAAATCAACAACAAGGAGCTGCTTCTTGCACCCATTTTTGAGGCAACACAGAGGGAAACCATCATGTGATTTCAAAGCAGATTCACACTGATCCACCAAGCAAGTCAGACAAAACACATGCCCACAAGATTCAAGCTTAAAGGGATCTTCTACCTCACACAGGCAAATAGGGCATGCATTCTCTAATGGAAGTTGAAGCAGGCCATTGTACTTTGTAGAATTTACCAGCTCAGAGATCATTTCTTCCACCCTTTGCTTGTCTTCTTTACTGCCTCGAACGTAAAGTGTATGTTGTCGTAAATTTAATCGAAGCTCTACTGCAGGCACCTCTCTCTTCAATCCTTCCAGATCAGCCCCGAACTTTTTTAACATTTCCTTCATCAAGTTTGGAGGTAGGTTACGGCCACGAAGACGAATATCCAAAGGTTTCTTATCACGGAGTTGTAGAAGGGCATGGATCAATTTCTCCTCTGCTGCAGCAACCTGATCTTGGAGTCCAAAGACTTTAATATTTAGACTTTGTCTGTCATACAGAATGTAAGTGCCAGTCTCTTGCTCAACAGATTTCAAATCTGCTACACCATCACGGGACATGAGCAACTGAACTGTACTTAGTGTCAGATCAGGATGGTTTATTGTTTTGCCTTTCATTAAAATCTCAAGAGGCCTTCTCAAGTCTGCTATTGTTTTTGTGGCGTTTGCAGTAAGCTTGACACGGAATATACCATATTCATTCTTTTCCAAATTGTAAGACACGCCTTTTTGGCTTCGGAAGCTCTCAAGAAGAGAAGCAACTGCTTGGCTGATAACATTATACACGCGTACTTGACAGGACACAGTACTATGAAACACATGCTGGCATTGTATTGTCTGCCAAGGAAGACAGCATGGAAGAACACTTCCTTGAAGATGTTCCAATGCTCTTGCAGCCTCTCGATGAAGACTTCCATCAAAAGTAATAGTGGCTCTCATCACCGAATCATTCTCCTCTGGAGTTAACACCTCAACACGGAAATTTTGGGCAGGAAAAATTTTCTTTGGCATGAAGGAAGAAATTTCTCTATTTAGTGCTTCTGCACACAAGGAAGCAGAAGGGGCAGCTATGGGTGTTCCCCTGAGCAAATGCACATCAACGATTTTCCTTGTTGTCGTGCTACGAAAGGCATCATACAATTCTGGCTCTGTTACATGCATTGGAATTCCTCTGACAAAAATGCAATTCTCATGTCTTGTACTAACCTCACAGTTGATATACCTTCCACCAACTCCCAGAGCAAAGCAGTCCTTTACAACAAATTCAGCTTCCCCACTGGCACATGTTACCAGCGCGAGTCCCCGACTTTGCTTAAGTGGCCAAGATACTTTAGCTCTCACTGCTGGAAATGGTAATCCTCGATTACTGGAAGAGCATACTGGAACCACTTTCAATGGAGAACCATGAAATTCCATCCCATTCAATTTTGAAACAGCATCTTCAGCATATTCAGGATTGAGGAATGTAAACTTCCCCCACTTCGTTTCATCTGAGGCCACCTGAAGATTTCCATAAAGTTTATAAAAATTAGCAACACCAGAGATAAGAGTATCCACCAAGCAAATAAGCTCCTTGTCATTCAACTCATGAGCATTTTGATGCAAAACCTCTACGGTCAGATACCTCTTCTCAAGTTCCAAATGCTTTATTTCAGCACCAGAACCAAATAGGGCAAGAGAACAATCACCAGGTTTTCCAGAAAACAAACTTTTCTCAAGGCATTCATTCCTCAACATCCGAGCTTCACACTCCAATGCATCATTAACGATGCCAAACACCTTTTCTATGTCTTGTTCTTTGGCAAATAGCACAACCTCTTTATTTCTGAAGTCAACTTCAACAGTCACACGGTCATCCCTGAATTCTTCTTGGAGAAGTGAGATTATCTTCTGCTGATTTTGGCCAGATTTTCCACAAAATTTTCTCAGCAAGTTATATCCAAGTCCACTTATTACCTTCACCTGCAATTTAAGCTTCTCCAGTTGCTGAATCAAAGGCATGGGGTGAATCGAACACAAAGCATCAGGATCAATAGCAGTTACACATACCAAATATTGATTTGGTACTGACAAGATTTCTGTGAACACCACCCACTCAGGCTTGCTATCATAAATGAGCAATGAGCAAGAGGGATGTAGTTTCACAGCCTGATCCGTTGAAATCACCTGGTAACCAAACCTTTCATGTCCAGAAAACATAGCAATATTACCAGAAAGAGATGTGAGAATAATTCTTTTTAGCAACTTATCATGCACGGTGGACTCCTCAGGGTTCCAACACCAGTAACTTGGGACAATGATGTTCAGCTCGTGTCTTAAACAATTCTCAAGGTCTGATATTGTTTCCTGGCACCTCCTCATGGTCTTGGCATTGATGCTATTCTGCCAGCACCACGTATTCCTGTTTTCATGCTCATCCTCCCACTCTTTATATACAGCTAGTAAAGTGAACAGATCTCCATCCTGATGACAGAATGGGACCTTTAGACGGTCAGCTTTGTATTTCTCCTCATCTGTGCCCACTCTACAAAATATGCTGCTAGAATTTGCCATAACAGCAGCTAGAACTACACCTTCCTTCCTCAAACCAAAACCAAAGCAATCAAGCATGATTTTCCCAAGCCTCGGCTCGATTCCCAATTTAACTAGGTAGCGACCAGTATCAGTCAGCTCAAAACCATCACATTTATATTTTACAGCACCCAGTTGTTCAAGATTCTTTACAGCCATATTAATAGCTTCTGGGTTTGGGGCATCAACAAATTCAAAATTCTGTGCATCCCTAATACCCAGCGCAAGTATTCTCAGAACAGCAGTGCCAAGATGAACTTTGCGGATTTCAGGTTCTTGATGCACTTCCATCATACTGAAGTCAGATTCAGAGTAAAGCCTGTAACACCTCCCCGCTCCAGTTCGACCTGCTCGGCCAGCACGCTGATTAGCAGAACTTTGGGAGATCCAATTAACTTTCAGTACATTGAGACCACTGCTAGGCACAAATCTGCTCTCCTTAGCCAGTCCAGAATCAACAACATACTTCACTTCTTTTATGGTCAATGATGTTTCAGCAATATTTGTGCAGAAGATTATTTTTCTCTTCCCAGGATAGCTCTTGAAAACTAGACTTTGCTCTACATGGGAAAGCTTTCCATGCATCGGAAGTACCACAGCATCTGCATCGCTGAAGTTTTCACATGCCCATTCAACTTCGAGTTGAGAAGTCAAGAAAGCAAGGATAGCACCCTCTTCTTCATTCTTGTGAATGATGCTTACCATTTTCACAACATCGTAAACATATGAAGCAGTAGCACAAGAACCGCGCAGATGGTTTGGCACGGTATTGAAGGAAGCCTCTTCTGATATATCAGGGACATATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0389200.1 | 7 | 25685059 | C | A |
| Osa07LNT0389200.1 | 7 | 25682039 | A | C |
| Osa07LNT0389200.1 | 7 | 25679975 | T | A |
| Osa07LNT0389200.1 | 7 | 25680307 | A | G |
| Osa07LNT0389200.1 | 7 | 25680995 | T | G |
| Osa07LNT0389200.1 | 7 | 25681581 | A | T |
| Osa07LNT0389200.1 | 7 | 25681834 | A | G |
| Osa07LNT0389200.1 | 7 | 25681858 | G | A |
| Osa07LNT0389200.1 | 7 | 25682181 | G | A |
| Osa07LNT0389200.1 | 7 | 25683071 | A | C |
| Osa07LNT0389200.1 | 7 | 25684585 | C | G |
| Osa07LNT0389200.1 | 7 | 25684962 | A | G |
| Osa07LNT0389200.1 | 7 | 25685580 | T | C |
| Osa07LNT0389200.1 | 7 | 25687046 | C | T |
| Osa07LNT0389200.1 | 7 | 25680208 | A | G |
| Osa07LNT0389200.1 | 7 | 25680071 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0389200.1 | osa-miR5542 | Cleavage | 3.0 | 10.568 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR6245 | Translation | 5.0 | 11.73 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR6251 | Translation | 4.5 | 19.396 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR6251 | Translation | 4.5 | 23.112 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR6251 | Translation | 5.0 | 21.911 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR6254 | Cleavage | 5.0 | 19.549 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399a | Cleavage | 4.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399b | Cleavage | 4.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399c | Cleavage | 4.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399d | Cleavage | 4.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399i | Cleavage | 5.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399j | Cleavage | 4.0 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR399k | Cleavage | 2.5 | 15.188 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR167d-3p | Cleavage | 4.5 | 19.177 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR437 | Cleavage | 5.0 | 10.55 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR444b.1 | Cleavage | 4.5 | 16.891 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR444b.1 | Cleavage | 4.0 | 17.154 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR444c.1 | Cleavage | 4.5 | 16.891 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR444c.1 | Cleavage | 4.0 | 17.154 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR1439 | Translation | 3.5 | 12.089 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR1859 | Cleavage | 4.0 | 16.723 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR1862e | Translation | 4.5 | 9.256 | 1 | 24 |
| Osa07LNT0389200.1 | osa-miR1862e | Translation | 4.5 | 10.152 | 1 | 24 |
| Osa07LNT0389200.1 | osa-miR1878 | Translation | 5.0 | 14.614 | 1 | 24 |
| Osa07LNT0389200.1 | osa-miR2875 | Translation | 5.0 | 13.064 | 1 | 24 |
| Osa07LNT0389200.1 | osa-miR5081 | Translation | 5.0 | 9.181 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR5490 | Cleavage | 5.0 | 18.394 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR5492 | Cleavage | 5.0 | 9.6 | 1 | 21 |
| Osa07LNT0389200.1 | osa-miR156f-3p | Cleavage | 4.5 | 10.184 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR156h-3p | Cleavage | 4.5 | 10.184 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR156l-3p | Cleavage | 4.5 | 10.184 | 1 | 22 |
| Osa07LNT0389200.1 | osa-miR5076 | Translation | 5.0 | 22.731 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0389200.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0389200.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Osa07LNT0389200.1 | 7 | nan | Physiological trait | Eating quality | R1245 | R1789 |
| Osa07LNT0389200.1 | 7 | nan | Physiological trait | Eating quality | R1245 | RM234 |
| Osa07LNT0389200.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | R1245 | R1789 |
| Osa07LNT0389200.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0389200.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)