© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0035700.1
CGCTTATTTTAGGATGGAGGGAGTACATATTTAGTAATAAAATTATCACAAAACTACATTGTTGGCACCATGTTAAGTACAAAACTTGCAACATTTATAACTCTAACGTAACATTAGTGGCAGAGATTTAAACTATAAAACCTGTAGTTTTGTGATAACTCTAGTATTAAATCTATAGTTTTGTACTTGGCCCTAAATTTGTAGTTCTCTAATAAATATTGTGTTAAATCTATAGTTTGTGATAATTTGATTAAAATACATGTAGTTTTATGAAATTTATTCATATAGATTTAGATTTCAGCATGTACGGGGTAGCTTTATGTTCTCCTCGACCGAGATCACTAGAGCTTCTTCAATTTAATTGGAGAACCGTACTGTGGTTGGAGAGTTAGCACGGTGTGTGGTGCGTGGGTGTATGACGGCGAGAGCTCGAAGGAGAAGCTCTGGAGGATGGTGGCGAGCGCCATCTTGGCTTCCAGAATTGCAAAGCTCTGGCCAAGGCAGATCCGAGGACCCCATGCAAACGAAAAGAACGCGGTCTGAAACTTCGTTGCCTTGGAGACTCCGTTGGCGAACCTTTCCGGGTTGAATTTGATTGCATCTTGTCCCCAGATGCTAGGATCGTGGTGAATGGATAGAACAGGCAATGTGAAGTTCACTCCTTCAGGGTATTTGATGCCACCAAGCTCTATTTCCTTGTGTGTTGTTCTTTGGAGGAATACCACCGGTGGGTACAACCTAAGAACCTCGTGGAGAATCATCGTTACAATCTTTAGACGACTCAAGCCATCATGATCTGGTGTGGTTCTTCCAAAATGGTGCATCACTTCCTCTCTTGCCTGCTCTTGCCATTCAGGGTGCATGCTTAGCAGAATTAAAGTCCAAGTGAGCAACATTGATGTTGTCTCCGAACCAGCAGCGTAAAATAACTTGCATTCCTCAATCATATCTTCTATACTCATTCCCACATCTTCTTTTTCATTTGATTGCCTCATATTCGATTCCACCAATAATCCCAACAAATCATCATTGCTACCTTCACCATTTCTAACTGCCTTGTCTCTTTTTACTATTATTCCTCGCAGAATTGTGCGGATTTCTTGATCAATTTCCCTGATCCTTCTGTTGTTTTCGATTGGTAAGTACCAGTAGCCTGGGATAAAGATTCTCTGAAAAGCTTTAAGTACGCGTTTAGCTTGCTCTTCTTGTAACTGAAAAATTCTCCACCCCTCCTGGTAGCTGCTCCCAAATGCCGTTCTTGAGATGACATCTCCAGTAAGATTTTGAAATTCATCCCAAACGTCTAACTCAGATATTCCTTCTGAAGACATTGAATTCACCCATCTAGTGATCATTTTGGTGCAACATGCTAAAAACACTGGCAGCATCCGCTTTATTTTCTCCTGGTGGAAGGCAGGGTTGAGAATTCTCCGATGTTTTGCCCATTTCTCACCTTCATACGTTACAACTCCGCCAACTACGAACTTAGCAATACCCGCGGTCGTTTGCTTGGCGAAATTGCCAGACTTGTTGGACAAAATCTCCCTCGCTAAGTCAGGGTCTCTGATAATCACGAATGGCTTTGGGCCAGTCCAAACGAACGACAGTTTCCCTTAAATCTGACACGTAAGCCACCTGTTAATAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0035700.1 | 1 | 30372411 | A | G |
| Osa01LNT0035700.1 | 1 | 30373171 | C | T |
| Osa01LNT0035700.1 | 1 | 30373319 | T | C |
| Osa01LNT0035700.1 | 1 | 30373326 | C | T |
| Osa01LNT0035700.1 | 1 | 30373399 | A | T |
| Osa01LNT0035700.1 | 1 | 30373442 | A | G |
| Osa01LNT0035700.1 | 1 | 30373522 | A | C |
| Osa01LNT0035700.1 | 1 | 30374519 | A | C |
| Osa01LNT0035700.1 | 1 | 30374707 | C | T |
| Osa01LNT0035700.1 | 1 | 30375838 | T | A |
| Osa01LNT0035700.1 | 1 | 30375985 | A | G |
| Osa01LNT0035700.1 | 1 | 30376069 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0035700.1 | osa-miR5794 | Translation | 4.0 | 20.69 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159a.1 | Cleavage | 4.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159b | Cleavage | 4.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159c | Cleavage | 3.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159d | Cleavage | 3.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159e | Cleavage | 3.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR159f | Cleavage | 4.5 | 23.333 | 1 | 21 |
| Osa01LNT0035700.1 | osa-miR168a-3p | Cleavage | 4.5 | 21.969 | 1 | 24 |
| Osa01LNT0035700.1 | osa-miR1442 | Translation | 4.0 | 12.128 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0035700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0035700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0035700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0035700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0035700.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0035700.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0035700.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0035700.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)