© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0390200.1
GATTAAACTTTGGTCTCTCTCATAAAAGTATAATTCCCTCCCCTAGAGACTTATGGTTCTGTGAAAGGGGCCAAACACCCCCTCAATGACTCACTCGTTGGAGAAAAGTTTCAATAAGCCGTTGCTACCATGTACGGTAGTACTGTACATACGACGGAAATCTGCACAAATCATAAATACACTGGATGGATGTACCTCATATACAATGTTTCTTGCAGTCATCACCATTTTTAACCCTACATCTTCAGAAAAAAGTAGGCCTGTAGCGTCAGAGAGGTGGTGCTGCAGACACAAGAAGTGTCTGATCTGATTCATGTTCCGCTCCAGCCTTCATTGATGACTACCACGACGCGTCCTGGAGCTTTTAGCAGCTTGCAAGCGTGAATGCTCATGTCTCGCGTGGGAGAGAAGCATATCCGATTGAGCCAGCCTCCTGCTGAATTCACTGTTGGCGGAACGATGGTTGCTCCCCATTTGGAACGTTGTCTCAGCAATCGCTTGATTTGAGCCAACTAGCAATTGGATTTCCTCGTCCATTTCCATGATCCTCTGTTGAAGGTTATCTTTCTCCATCTGTAAAATTCCGTTCTGGGCTTCAAGCATTTGCTCCCGTTGCTCAAGCTGTTCTATGAGCAGTTGGCTCTCCAACAAGTCCGCCTTTCTTTGGTCCATATCATCAAACAAGCTGTCTCTTTCTTGAATGAGATGATCAAATTGTTCTTTTAGCATGTCAAGTTCCACATCCTTTGCCTTTGACTGTTCAATTTGTTGCTGGGAAGCCATTAGCAATTTCTGCAACTCTTCCTGATCAAGCATGTTAGCATAGTTTGTCATGTCTAATTTGACACCAAGTAACTCCCTTATAATATCATGTGTCATGCTATCAACGGCGGCCAGTCTTGATGTTAGCATGCAGATCTCTTTCTGTTTATTACAAACCAATCCTTCTAGTTCTTCAATTCTCTGGCGTGCCACTGAGATTTCTTGATCCTTTTCAGAGTTCATCTGTTGAACAATGCTAGATATGCATCGGAAAGGTGAACCAGATCCTCTAGTCCGTCCTGAAGGCTTTTCGAATTTGGTATGGCCAGTATCAGAATTAGATTCATGTAGACCAAACTTCTGTTTAGAAATCATGTGCTCCATTTCCTGATACTTCTCCTGAAACAGCAAAGACTGTGCTTCTGAATGCAGGACCAACTCAGCTATGTGCTCTTTGTATTGCCTTACCTCCTCATCTTTACAACTAGCTTCCATTGTGAGACATTCAATCTTTCTTCTAGCATCCTGATGTGCAATAATCTCCGCTTTCAACCTCTTTTCTAATTGGCATCTCCCTGGACACAATTGCTCTGTAGCATCACATTTTGATGTGCTATCTACAATGAACATCTCTTGAGCTTGTTCAGCTTCAGATTTTTTATATATTTGATAGCTCCTCACTTCCTCTTTAAGGTTGCATACTTCTTCCTCCAGAACTGTTATAGTAGATTCAAGTTCTTCCACAGAACGTTCAAGAATCCTAACCTCTTCCTCTTTCTCCTCAGCATATACCTTACTTATCTCTGCAGCTTGACGAGCTTCAATAGAAGCAGCTTCATTCTCCTCAGCTAAAGCCACAGCCATTTCAAGCTTGTCAGTTAACTTGAGTATTTCTTCTTCGAGATTTCCTTTGTCAATACTTATAATTTTAAGATTATCATTTAACTCTTTGATTTGTGACATCAAGCGTCCCTCTTCAGAAGAATTAAGCAATAGTATTTCGTGCTCCAATCCCTCGATGACCTTAGATTTGTCTTCCAGCATTGCTTTTGTTTCACTAATCATCATAGCTTCCTCTTCCAACATCACTTTGAGATTGTTGTTTTCCTTGAACAACTCTGATGACAAACTTTCAGAATGTTCTAACTCAGACCTTAAGATTAGGAGTGCAGCTCCATTTTCAGCCAGCTCTTCCTCTAGCACCTTTTGTTGTTTCAGTATGCTTTCCATTGCAGAAGTTTTCTTTTCAAGTTCTCTTTGAACACTGACAAGGGCATCTGATATTTCATCAGCTTTGTCTTTCATGTCCTTCGCTTGTGATGTAGACTCTTGCAGTAGTTTAAGATCAAAAGATAATCCTTCTGCAACATCACTTTTCCTGTCAAACTCTCTTCTTAGGGATGCATAATCCATATCAAATGTCCTTTCGACATTGGTATCTTCCAGTTCTGCATTACTGCCAAAGGGAACTACATGCACAGATGCCTTTTCCTTTCCATCTACGACCATATATGTTCCTGGAAAAATATCACCATTCATACCACCCAACTGACGTGAACATGACTCAACTTGTTGAGATACTCCCGCATAAGTACTTGAATTAGTGCGCCGGTTCTGCTCAGCATAAGAATTGCCTTGTTCTTCTAGAAGTGCTCCCATGTTAACAAGATAAGACCTTGATTCATATATCCATTTCCTCAAGTCCTGGCCAAAACTGATAACCTCCGAGCAGAATGCAAATAGTTCTACTGTAGTAACTCTTTGTACTTGATGAAAAGATTCTTTAATTATAGTAGCAAGGTTTGTCATCTCTGCTACACATCCATTTACCTGTTCATGCAATTTGTCATACCTCTGTGCTGTAAATGAATTTGACGCTTCAAGCTCCTGCAAATCATTGATCAAAGAAGTTCTCTCAGCAAACAACAATTCCACTGCTTGCCTGCAACTGTCTTTTTCAAGTTTTAGCTCCTCATTGGCCTTCAACAGAGATGAGAGCATAGTTTCAGCTTCTTCCATGGTTTCTTGAGCTTCCTCAAAATTTGAAAATAAGGCCAGAACCTTATTTGACTTGTCTTCAACAAGATGCAACACATCTTCAAGCTTTGCCTGGTAGTGTGTGTTAGCTTGATTCACTTCAGATCCATCTCGGTTGTGACTTATTTCAGCTACAGTACCCACATTATCTGGTAAGTGACACTCATGACGAGAATACCCTTCTGTTGCTTCTGCAAATAAGCAACTCTTCTGTTTCACATTGTCATTCAGTTCTTGTACTGTGCAATCTTTTTGACGCATTAAATCTAATAGTTTTAGTGCTTCCTGGGATTCATCATTATCCAACAGCTGAGCTTCAGTTATAGCAAGAGTAGCACCTCTTAGAATGTGCAACTTTTCTTTCACCTCCCTGCCCATTCTCTGTGCAGCTTGTAGCTCAATTTGAAGCCTAGAAATTATTTTTTCCTTCTCGATACTAACTTTCATAGCCTTCTCCACATGTTCACTGACGGAATGATTGTTGTAAGGAAAAGAGCTAATCATATTATCAATATTCTGATATGCATCATCTAAAGAACTGCAACCATCTGTCAAGAAGCTTGTCAGATCAACAATTGCAGACTCCCATTCTTCTGACAAAGTTGCAATTTCTACATCTTTAGCAACAATAATCTCTGAAAGCTTGGTACTTTCTTCAGCCATAATAATTAGCTTCTCTTTGAGACCTTCATTTAAGCTTTTAATATGTGTCAATTCGTCCTGTAATAATTGTTCACTTGAATGCAGTATTTCATTTTGACGATACACTGAGATCTCGTCATGACCATACATCTTCTCAGCATTTTCTTTTACTAGACTTATTTCATCATTTTGTACAGAATTTAATCCACATTCATTCTCCAATTGTCCACTCAAAATAATGCCTTTGTCAAGTAGATTGCGTGAAGAATTGTACTCTAGCACTTTTGTAGAGTTCTTCAAATCACATATCTCCGGATCAGAGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0390200.1 | 7 | 26527988 | A | G |
| Osa07LNT0390200.1 | 7 | 26527998 | G | A |
| Osa07LNT0390200.1 | 7 | 26531243 | C | A |
| Osa07LNT0390200.1 | 7 | 26527974 | T | C |
| Osa07LNT0390200.1 | 7 | 26527980 | G | A |
| Osa07LNT0390200.1 | 7 | 26528025 | A | C |
| Osa07LNT0390200.1 | 7 | 26529139 | T | C |
| Osa07LNT0390200.1 | 7 | 26529290 | A | T |
| Osa07LNT0390200.1 | 7 | 26529454 | A | G |
| Osa07LNT0390200.1 | 7 | 26529551 | A | T |
| Osa07LNT0390200.1 | 7 | 26529552 | T | A |
| Osa07LNT0390200.1 | 7 | 26530799 | C | G |
| Osa07LNT0390200.1 | 7 | 26530866 | T | C |
| Osa07LNT0390200.1 | 7 | 26531042 | A | C |
| Osa07LNT0390200.1 | 7 | 26531149 | A | T |
| Osa07LNT0390200.1 | 7 | 26532912 | C | T |
| Osa07LNT0390200.1 | 7 | 26532916 | C | T |
| Osa07LNT0390200.1 | 7 | 26533198 | G | A |
| Osa07LNT0390200.1 | 7 | 26533664 | A | C |
| Osa07LNT0390200.1 | 7 | 26533933 | T | C |
| Osa07LNT0390200.1 | 7 | 26532925 | A | C |
| Osa07LNT0390200.1 | 7 | 26533744 | A | C |
| Osa07LNT0390200.1 | 7 | 26527992 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0390200.1 | osa-miR5542 | Translation | 4.5 | 17.442 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR5543 | Translation | 3.5 | 10.324 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR5804 | Cleavage | 5.0 | 17.389 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR5812 | Cleavage | 5.0 | 11.464 | 1 | 24 |
| Osa07LNT0390200.1 | osa-miR5834 | Cleavage | 5.0 | 8.772 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR5834 | Translation | 5.0 | 10.579 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR5337b | Cleavage | 5.0 | 16.317 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR171g | Translation | 4.0 | 20.662 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR426 | Cleavage | 2.5 | 13.993 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR1438 | Translation | 3.5 | 14.925 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR1438 | Cleavage | 5.0 | 15.094 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR1861b | Cleavage | 5.0 | 9.499 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR1861f | Cleavage | 5.0 | 9.499 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR1861i | Cleavage | 5.0 | 9.499 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR1861l | Cleavage | 5.0 | 9.499 | 1 | 22 |
| Osa07LNT0390200.1 | osa-miR2878-5p | Translation | 3.5 | 18.816 | 1 | 24 |
| Osa07LNT0390200.1 | osa-miR2922 | Translation | 3.5 | 14.982 | 1 | 20 |
| Osa07LNT0390200.1 | osa-miR5339 | Cleavage | 4.5 | 19.759 | 1 | 21 |
| Osa07LNT0390200.1 | osa-miR1426 | Cleavage | 5.0 | 14.768 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0390200.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0390200.1 | 7 | hd7a | Physiological trait | Flowering | RM18 | R1789 |
| Osa07LNT0390200.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0390200.1 | 7 | nan | Physiological trait | Eating quality | R1245 | R1789 |
| Osa07LNT0390200.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | R1245 | R1789 |
| Osa07LNT0390200.1 | 7 | qPLLN7 | Physiological trait | Sterility | RM234 | RM172 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)