© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0390300.1
GCAAAAGCAACATCAACAACCGTACTGGATGCAATGCATCCATTTCGACGATCTGTCGATTTTTATTGAAAACCAAGTTTGTTTTCAGGCATGTTTAGAACAAGTGATGTAGTGGAATACAAGTGGCATCTGACCAAGAACACACTCTAAGCAGCCAATTTCCTCATAAATACACCCTTTGGAGCAAGACCAATATCATCGATGACAATACAGTTTTATTCAGCCTGCTTCCAATATTGAATTGTTATTTCTTTTTCCCTAGTTCAAGACAGCAAGAGCTTCAAGAAGGGAAGCAACAAAATGCATCTGGACCTCCTCATCGATCGTCAAGAACAGGGGCACATGTACAAACAGAGATTTGATGCCGTGTTGCTCTGCGAACCGAAGAGAATGATAATACACATAGTTGCATACAAACCGACCAGCATCGTCTGATGGCATTACATCGTAGCCTGTCTTCCGGAGTGACTTGGTCAACTCATTTACCGGAAGCGTAGTCTCTCTTGTCCGTGAGATGGCTCCATCCGATGGTACAATAGGAACCCTCTGAGGTTTCCACCCTAGCTCATCTGGACAACGGAAGGTGGCTTCGTTAACAGCCTGATTCTCAAGAGCAAACCTTGTTGCACCACTATTAACTCCAAAATGGATCCAAATTACTTGCCCCTGAGCCGATGACCCATTCTCTCTTTCTGCAATGGCAGATTCCAAAACCTTATATAATGTGCCAAGTGCCCCCTGCCCTGCAGTTTCAAGCACTGTGCAGCTTCCAAGTACAAGGTTTTTCGGCAATCCTTTCTTTTCTACGAATGATTTAAGATTGCCCACAATTTTCTCAGTTGGGTTCTCAGCAACCCCATGGAACTTCTTAAATCCGGTAACATGGACAGTAACAACTGAAGGTCCTTCTGAACCCATTTACCCTTATGAGTTATGAGAGAGAACAGAAAACACTATCCCAAAAATCTGAACAGAACAAAGATCAATAAATGGATAAGTATTAGCAAGGCATAAACTACACCAGACAAAAAGCAGGATGTCACGACCATCACTGCATCATTATGAACTTGCTAAAATCCTAAGCATCAGGCAAGAAGAAATTATAGCGGGCAGTTTCATATGCCTCAATGAGGCTCCTGAGCATACAACATGCAGGTTGCAGGGAGGTTAACAGCAGGGCACACAAAAGGCTGTAACACTGTAAAAGTAAAAAATGTATGACCCCTAAGTAAATGTGAACAAGAACCAGATGATTTTTTTTATCTGCACAAGGACGACATTAAGAACCACAATCTCCAGAACTGATGAAGCAATCATTGTTCTTCCTTTCAACCAAAAAAAAGAAAGCAATCATTGTCCTAAAGATTTTATTAAGAAGTGAACAACTCAAGAAATAATATAGTCTCACAGAAGGCGAGAACAAGTAGGACAGGTAACCTAATGCTTTGGTTCAACCGAAGACAACCTTATCCAAATTCAACACTAAACAGTACAAGGTTGAAGGCTACATCACATATGTGATTTTTGTCTCTGCAAAACCAAGCCTGACCAGTGACCACAAGAACAAGAGCACAAAAATTGTTCTAAACAGCGAAGCTCCTACCCAGAAGAAACTAACAAGCAGGTACTTGTAGACTTGTGGTGGGTACTTGCCATCTAACTTTGCCACAACCAACTCAAACTCAAACTCACAAAGAACATAAATTCACTAAATAACCATCACCTATCCTATACGAATCGACTGAAACTTCCTGAAATCGATCTGCACCTATAGAAAATGCACGCAAAGAATCCTTTCTTGAAGGATGTTATGCTCTTAATAGTCAACTCCACGTCTCTACCGAAAACTTAACAGCGCAGAGGACCGCACAAATCCTCAAACCCCAATTCTCCAATCAAACACCAGGCAAGGCATGAACACACACCAACTGCAGCAAAATCAAAGAGGAAATTCACTCAACCCAAGAACCAATCCAGCCAAAGCGACCACCTTTGAGGCCGATCACCTCAGAATCGCACCCCCAAACCCCACCAAAAATCCACTGTAAGTCAGCAAGCAAAGAAACCACAGCCTACACGAGCATCCAACAACAAAAAAAAAAAGAAGAAGAAGGGAACGAATTGTGCACGGGCAAACACCACCACCCAGGTCCCCAACCATCAGCGCCCCCACCAAACCACACCATCCAAAGGCTCAAAGCACAAAAAGCTCTCACCTTGGGGATAACGCAGCAGCAGCGGCGGCGACGAAGAAGGAATCTCGTAGCAATTTTTCTCCTCTTTCTTTTTTTTTTCTTCTTCTCAGTCACCGCAAGAAGAGAAGAAGAAGATTCGGGGGGATGGAAACGGGGGAGTGGACGATGAGATTGCAGCGAGGGGAAGGCGGAGGGAGGCAAAGGCGACGCCTTTTAAAGCGCATCGCGCACCACCACCCAGTCGATGAGGAGTAGAACAGTCGAACTGCAGAAAAGCAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0390300.1 | 7 | 26620094 | G | A |
| Osa07LNT0390300.1 | 7 | 26619405 | C | A |
| Osa07LNT0390300.1 | 7 | 26619647 | C | T |
| Osa07LNT0390300.1 | 7 | 26619860 | T | C |
| Osa07LNT0390300.1 | 7 | 26620500 | C | A |
| Osa07LNT0390300.1 | 7 | 26620704 | C | T |
| Osa07LNT0390300.1 | 7 | 26621414 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0390300.1 | osa-miR416 | Cleavage | 4.5 | 17.509 | 1 | 21 |
| Osa07LNT0390300.1 | osa-miR1873 | Cleavage | 3.5 | 18.905 | 1 | 24 |
| Osa07LNT0390300.1 | osa-miR2926 | Translation | 3.5 | 17.328 | 1 | 20 |
| Osa07LNT0390300.1 | osa-miR5144-5p | Translation | 4.0 | 11.873 | 1 | 21 |
| Osa07LNT0390300.1 | osa-miR5144-5p | Translation | 5.0 | 22.951 | 1 | 21 |
| Osa07LNT0390300.1 | osa-miR3981-3p | Translation | 4.5 | 20.375 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0390300.1 | 7 | hd7a | Physiological trait | Flowering | RM18 | R1789 |
| Osa07LNT0390300.1 | 7 | qLVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Osa07LNT0390300.1 | 7 | nan | Physiological trait | Eating quality | R1245 | R1789 |
| Osa07LNT0390300.1 | 7 | qPLLN7 | Physiological trait | Sterility | RM234 | RM172 |
| Osa07LNT0390300.1 | 7 | nan | Resistance or Tolerance | Other soil stress tolerance | R1245 | R1789 |
| Osa07LNT0390300.1 | 7 | qCIVG7-2 | Resistance or Tolerance | Cold tolerance | RM336 | RM118 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)