>Osa07LNT0390600.2

GAAATAATGCGGCTAGCTCATGTCTATTGATATTATCGTCTATCACAATTAGCAGAATCATACAAGAACCAGCAATCAGAATTATCAACAGCGCCAGCACGCCGCGCCTCAATAAAATCCCTCAGTTTGGCGTCTGCAGATCTTTGAACAATATCTGGCTATAATTCATGATCGTTTCTCATAGGCATTCAGAAATCTTTGAGCAGCATCTAGGTTCAGCTCTTTGTAAACAAGTTTCTTATGGGCTTCTTCAAATGTCTTGCAGAACAACTCTGCCTTTGTTGCTCCAACCTTTTTCTCAGCAACCATCTTCAATTTTTTCATGAATTGATCAGATGACTCATTTTTGTTGCCCCTTGTTGCCTCCTGAGCCCGTGATTGCTGTGTGCTGCCTTTGCTTGATGCCCCTGATTCAGCCATATTTACTTCAGATCATTCTTCATTGAAGCATTGCCCATTGATGTTTCCATTTAAATTTACTTATTATTGCAGCAAACATTGTTACCGTTCAACCCAGTTTTCTATTTATGAAAATGAGCTCTACCATCTAGTTCTCTCTCAACCATAGCCTCCAACTCAATGTTATGCAGAGAGAAACACAAACATGCTTGCAAATAGCCTGTTAAAAGTTATTCCTAATATTAACCTACACACTTCAAGGGGCTAAAATTAGTGTCACTAAAAATAGCCTGACCACATAAATGGCATGGGAAACACAATTGCATGGCTCTGTAATTGAAGTAGCATGGTTATATTGAGATATGACCAACTTAGTGTATCTCTAGCTTTTAGAACCATCTGAAGTACAGAAATAAAAATCCTACAGCTCTACATCTTCAAAAGAAAATTCCAGATGTACTGCATTCTAGCATCCTTATATTGTTAAAGAAAAAAAAAGAGTTTTCCTCTCTCTATCTCATTTTAACTAACATCACTCAGGCAATTACCAGTGCACTATCATCTCTACAACTTCTACTGCGCAAACAACTCAGGCTAGAAGACAGGTTCATGACGCAATTCGACGGATCAGTATAACCAAAGTGAGATTATCTCAACATAATGCGTAATCCAGTCTCCACGCACATCAGCCCAAGGCCACAAATCAACAGCCACCCAAATCAACCAACCCATGCCCTAAAATCGAGACCCCTCTTGCTCCCCCAACTCAAGCACCTGAACTGCTAGATCGCCGCCGAAACGCCGATTCGCC

Explanation	CPC Score
noncoding	-1.20687

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0390600.2	7	26708634	C	T
Osa07LNT0390600.2	7	26708863	T	C
Osa07LNT0390600.2	7	26709127	G	C
Osa07LNT0390600.2	7	26710453	A	G
Osa07LNT0390600.2	7	26711289	G	T
Osa07LNT0390600.2	7	26710010	T	C
Osa07LNT0390600.2	7	26711059	G	A
Osa07LNT0390600.2	7	26710782	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0390600.2	osa-miR5159	Cleavage	5.0	12.78	1	24
Osa07LNT0390600.2	osa-miR419	Translation	5.0	5.232	1	21
Osa07LNT0390600.2	osa-miR5503	Translation	3.5	14.567	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0390600.2	7	hd7a	Physiological trait	Flowering	RM18	R1789
Osa07LNT0390600.2	7	qLVG7-2	Resistance or Tolerance	Cold tolerance	RM336	RM118
Osa07LNT0390600.2	7	nan	Physiological trait	Eating quality	R1245	R1789
Osa07LNT0390600.2	7	qPLLN7	Physiological trait	Sterility	RM234	RM172
Osa07LNT0390600.2	7	nan	Resistance or Tolerance	Other soil stress tolerance	R1245	R1789
Osa07LNT0390600.2	7	qCIVG7-2	Resistance or Tolerance	Cold tolerance	RM336	RM118

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus