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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs
Sequence

>Osa07LNT0390800.1

GCTCTGAAACTAAATCTCTTTATAAATATCAAATAGAGCACTAATACGAGTAAAGCTAAAAGCCGATATTTCTTATCTACATGATGAGACTACGACTAGTTCACGGTTGTTGCCAAATAAGGTTAATATTTACATCACCTACGAGCAATCTCGGTTAGGCTACAAAAGGCTATGGTAAATATTTGGCCAGGCGACAATAGGCTGAGTTTGTTTTCACTTTTCAGAACCACGGGTGCCATGTCGGATCCATCATGCACAGGTTCCTCGAAGATAATGCCGCTTCCACGAGATCCGTGACGCCTCTTTGGACCGACTGAGGTGGCTCAGATGAATTCTCCTCCTCATCAGCAAGATAATGTGGTGATATTAATTTGATACGGGTAATGACATGCTCCACATTGTTTATCACCTTTTGCTGGAAATCCAACGGGTTAATCATTCCAGCAGCAACTGGAACAGAAGGAATGCCAAGTGGCCTCCTCCATGACCAAGATAACAGTTCATCACGGAAAAACATAGCCAAATGGTGCCATATATGCTGGCTTTGTTTTGGTGAAACCACAGACTGGGCAGCAGAACACATGGCAGACACAATGAGACCTTCAACACCGAAATTTGAGAAGAAAGCTTGCATATTGCGTGTCAGCCTAAAGGGAACTAGCTCATTGAACTCAATCATTCCATTTGGATCATAAGCTGGATGGAAATCATTCTGGAAGATCTTGCCAGTATTTTTAGCAAATAATATTTTGTTAGGAGCCCTACCACCAATCTGCAACATGTACGACATGAAACAGGACAGAGCCACTTGGATTGCAAACTGTTTCTTGAAGGTCCAGAGGTGATTCCCAGTTGGTAGAATCTTATGCATGTATTGAGAGAAGATATTATCATTAACGATATTTTTAGTAATTTCATTATAGGCTTGCAAGCGTAATTCCACCACTGCTTCAGGGGACACCTGCCCTGAGATGGCTTGATTTAGCTGTTCTTTGAAAATTGTAATAGGTGAATCAGCTTCTCTATTATGTCGGGCACAGTTAATTTCATACACCTCCAGGAAAGTGCTGTACATCAAATCATCCTCTACCATCCGAACCTGTGACCAAACAGGAATAATGATTGGGGTGTGAATAGCAAGATGGCGCTGCCTCGACTCTTTATGTTTGTCAAACATTTTGTTTAGTACACGGAATAGCTGCAGCATTCTCTCATCACTCCGGGCATTTGGAGTCAATGATGTCTGAACAATAAAATGGCGCTGTGAACCATCAGAGCCAATAAGTGTCAGACGTCGGAAGCTACTACCGTGCCTCCGGACAATAGGAATATCAGGTCCAACTCTGTCCAACTTGACAGTATGATCAGGTGCAACCTCCTGATCTGTGAAGTACTGCCCGGGAAGTTCTATATCAACAACATGGAAGTCCCTGAGAATTTTACTTTCTTCCTCTAGCTTTAAAATTGCAGGGAACCGATCCTCAACATTACTCTGAAGAACATTCTTCCAGTGCTTCAATCTCTCAGTGAGTTCAGCAAGTGTTGCTGGAAAAGTAGTAGCACTTTCTGGGTCAAGATCACGTTCAAAATCTTGCTTGTACTCCTTGACAAAATCAACATGCTTGTTAACAGCATCTTGTGAAAAGCAAGCTCGGCATACACCAGAAAGTTCCTTCTTGAGAGATTGTGGAACCTCGCCTGTAGTTGCAGTTGGATACTTGTAGCAGCGGTGAAGCAATGCATTAACCACAGCAAGAAGTCTTTCCTCGGGAAGAGTAACAAATCTTGATCCAATTTCAGACAGTAAAACCTCAAGCTCATTGGCTAGATTGGTATGCTTGCTCCTAAGAGCTTCCATTATATCCTTTGCAGCATCAAATGCACTTGCTGCAGAAGTTACCCAGCCAAGTCCATTATTGCGTCTTGCTGGCATTTGCGAACCATCTGCACCAGTTGAACTCGGTTGACCTTGATCATGGCCAGCGCTTGTACCACCCTCAACATTAGATCTGTCTGACTCTTGTCCTTGGAGATTACCCCCATCATGAGAAACTGCCGCACCACCTGACTGGGTAGCTTGATGAACTTGGTTGTCAGAAGTCATGTTCCCACCCCCAAGATTAGATGTCCTCGCGTTCCCTTCAGATAAGTTATTGGCAGCATTGTTTGCCAGCATAGCCTGCTGCATACGCTGCTGAGCTATTCTTCCCATTTCAGTTTTTGTAGCAACATCACGACGTTCCATCAAGTATGTCCGAAGCCAATAATACAATGCCTGTGGATAAACTTGGGCTATTTTCAGCAAAACTAATTTGCAGTGTTGGGCTTCACTTCTCTGTAATGATAGCAATAACTGAGGTATCCACGAAAGCCAAACCCAATGGGGCAACTGCTCAAGATATTTATCCAAAGCCCTTCCAGCAGGTTCATTTTGTGTATCGAAGCTCAGAAGGTAGAGAATTCGTGCAAGATGGCTCCTTGAGTTTGAAACTCCATATTTGATGCCTTGGAAGAAACAACTTACGGCATACTCAAGCCAAATCTCATCTTTTGTCTCCTTGAAAACCATATCGCAGTAATTCCCCCAGCTAATCCATGCTTTTGGCAAATGCTTAAAAAGTGTTATAGCATTTGAATAAGCAACATTTGCATTCTCGCAGTCATTCATTTTTAGCAGGAAGTCACCTCTCAGACGAAATATTTCTGCTTTGTTCTTCACAGGGAAAAATTCCAAATTGGTGTTATTGATTAAGTTAAGACCACTGACTAGTTCGCCTTTCATCTCTAAGTATGCCTTGGCTTGTTCACATATCTTCACAAATGCTTCCTGAACTTCCATGGTAGCATGACCATACATCTTATCGAGTATAGTTACACAAACGTCAGGAAGACCTTGTTTGCGAGCTATGTGAGCAAGCTTGTTCACATTCCAAGCTTTGTCTCGGTAACCAAGATGATGAAGTTGAGGATTTGTTTGGCCAAAATCTTTGAATGCGTCTATTACTGAATTGTACATCTCATTCCTCCACTGGAGGAGGTCATACCAAACAGTCATATTATCCCATTCATTAGGAGTTCGAAGTCTCCATGTCTCAAGAATATCCTTGAGGTCAGCAAAGGAGTTGTGATGATTGGAATTGGCACCAGAATTTCCTGAAGCTGGTTTGTTCCCATTTGCAATGTCAAGCAGAATTTTAGAGGATTCTTTCACTTCAACCAACTGCTGAAACTGCTGCAGCAGAGGCATTCGGGACTGCACAGACATTTCAGGTAACTGCCACCATTGTTCTAGTGCAAGTTCAACACCTTTGCTGACAAGGTTCTCAGCTTCACCAACACCATTAGTACCTTTGTCATGAAGAGTGAAAAATGATTGAATAAGGCGTAACTTTGGTGTCTCTTCTACCTGAGCTTTTGGAATAACATTCTCCTTCATATATGTCCAGTCAGGCGCCTTCCAAAGGCAGTCTAAGAGAATCTCGTAATTCTCCACACCTTTTCCAAAATCAGCCAATACTTCCCACTGACCTAATTGAGTGGCACAAGACAACCACTGTTCTTCCCAAAGACACATTTCAGCCTTAGGGACTGTGTTATTATATGTACCTTGAGTTGCTTTTATCATTGCCTGGTAAAAGAGATTTTGTGCCTGCTGCCAGTAACCGTGTTGGACAAGTGATAGCCCAGCTCTAGTTTCTGCTGTGATTGATCTTCTCTTCCATAATCCATATCTCATGTCATCCTCATTGAGAAGCCTGTATAATTCAGCCAGTGACTCTGAGCATTTGGCCTCATTCATATGCATCATATGGCTCTCGAGTAACGCAATCGAAGTATGCCATGCATTGCAGGTCTTTCCGATATATTTGATAAGCTCACTAGGCATGCGCGGTTGAGGATGGCTCAAGTGAAGACCTTCAAGGAGTGCCTGGGCTACATTAGGTCTGCATCCTTGCTGCCTCTTATGATAATCTTTTGACAGAAGCGCAATTATTGGCTTAGCAAGAGCAACTTGCTCCTCTTTGTGTAAGGTTACCCAAACAATTGGGAATACAAGAACCCACAAATGATATGCGACGTTGGGATCAGCAAATGCAAGTTCCCTCAATGGAGCCATGACATCTGCCACCACAAGCTTGCTTGCCTCATTTAAAAACTGAGCATGTCTTGTAGTCAGAGAATCAAACGATAAAGATGTACCATCCAAGCTTTCCTGAGCATCAGGAGCCTGTTGTGGCATAATCATGCGATCTGAAACTGGCCCAGATGTCATAAGTGCAGGAACTCGAGCAGAATTTGCAGCGAGTGTAATTGGCTCATTTTCAACTAATATTGCCAAAATAAGATCCAGGCCTTGCTTCAACCAGAAAACATCACTCACTGCTTCCCAGTCCTGGGTCTGTATTATAAACTGCAATCTAGCAAATAATGTTTTTCCGACATAGTCATGGTAAAGTTTGAAGAATCGCTTCCTCATTTCTGGGTCTTTAGCTCTAAGTCCAAGCATGTATTGCCTCTCCACCTTATGAAAATACTCTTGCCTCAAAGCCATTTGATACTTAGCTGTATCTCCACAGAGTGAGTAAAGAAGTTGCAAATATTTTGCATCCCATTCTTCTTGTACAGATGGGGGAAAGCTTTTTCTGTCAACTACTGATAACTTCTGAAGATAAGCTATTATCTCCTTTGGATTAAGTGAACTGACAGAGCCAGTAGATGAAGCAAGTCTGTAGTCATCCTCAATCCAAGCTTTTATCATGTCCAGTATGCATAGAAGAACGCTAGGATCTGTGCCTTTTTCTGAAAGGAGTGCTTGAAGTGTTTGGCCCATAGATCGCCTGAACTCAGAAGAGGCCATCACCCTCTCACTTATGAGTTTTAAGACGGTCTTCATGTTAGATATGACCATAGGGTCTACTGTGGGGCGTGAATTAACTGATGAATCCTGTTCAGGCCTCTGTCCTTGTCGAACATGGTTGCCAGCAGAAGATCCCATGTCACGTGCAAGACGTTGCAGGACTCGAAGAAGCAAACCTATGAACGGATCAATAAAATTCTTCTGTACTTCTGCGAGTGCGTTGAGGACAAACAGTGCAAAGCTTATGATAGAGTTAGCATTGCTAGGTTCAAGTGATATCTGGGGAGTGGTTACAGCAGCAAGATGCTTTTGAATGAGATCTTGAACTCTTTGGTACAACAACTTTATATCTTGTGGTGTTGTAGCTGCTTCAAGGGGAAACGCGCTGAATACCATCTTTAGCAATGAACAAAGAGACTTGCCAGCATCCAACATTTTGTTGTTGAAGCAAGGTTCCAGTATTTGAGAAATATGGTTGATGTTATTCCGGATGAAGAGGCGGGGTTGCTTTTCTAAGACTTTGTTCATAACATCTAGGCCCTGAGCAAGTGCTGTTGCAGGATCCTTGGACTGAGAAGGTGTCAAATTCCCAAGCAATTTCTCAAGATAATTAAATTTAACATTGGCATTTGGCCAGACTTCCAAAGCTTGAGTCAGTAGATCAAGAGCTTGCTTGTACATTGAGCTAGATTCCTTATCCTTTGGTTCAATCACCAGCGACACCCTTATAAGGAATGTAATGATCATCTCCTCCATAGCAGCGTTAGGTTTGTACTCCTCATCTGGTTGCCCGGAAGACCCAGGTGTCTCGATATTAGGTATTGATGCCCCCCCAGGCGACATCACGCAAAGGGGTTGCAACCCTGGTTCAACTTTCACCCTCTTACTCAAATCATCACCAAATGTGGGAACATCCGATGAGCGTTTTGGATCACCGCCAATAACAGGACTAAGCATATCACCAATTTGACTCGTGTTCTCACTTTCCTGCACAACTTTCATCTCACTTTGTCTCTGTCTTTCCCACGCCACCACCAGTCCAGCAAGTTCAATTGCCAGTCGTCTATTTTCTGCTGTTGTGTTGTATGGTAGTCCAAGACGGCTAAGGGAGTTGACCATCTGGGGAACAAAATGGGCTCTGCAACTGTAGAAGAGGTCTGCATGACGAACAATAAGCTGGAATATGTGAATCATGTTGGGAATTGAATGGCCTTCCTCCACAAGGATTTTCTTGGTGTATCTAATCCATATTGGCATGCGGCTGTCCCCTGGAGGGAGTCTTCTAGGAAGGGCAGGCATGAGGATGTCAAGAGCTTGCTTCACCAGCAGCTTATTTTCTGGTTGGCATGTCCGCAGTAGAGCAATAAAAACCTGCAGAATAATCTTTTCAGGAGCTTGATAGGCCTCTAAGAAATGACACACGTTCACAAAAGCCCATTGCTTGCTGGAATTATCTTCACGTTTGAGATGGTTCCAACCGAACTTTATGAGTTCCTTTCGATGGTGAACAAGATCGCTCTGTAGATACTTCAGAAGTAATGTTGCAAGCTGAAGGAGTTCTATCCTCAAGGGTTCATCATATTCAGCACTGACCTCTTCCGGAGGATCAAGAAGCTTGTCAACAATAGTTTTAATAATAGATGGATCAACAACTTCCCAACTTTGCCCATTTTGGAAAGAATGAGCTAGCATTGGAAGGATAAGTATCTGCATAGCAACGACTAAATGATCTTGTCCATAATGCTTTGACTGGAATATGTTCAGAAAGTGATTAAGAATAATTTTCTTCAAATTTGGTGCATAGCCTTCAGCAACCTCTATAACATAAAATTCCTTAAGAAAACTATAATCAATGCGGCTACGGTACAAGAATATTGATAGCATATCAAATAGCGCACCAACTTCCGTACGATCATGCCTTAGATAATTTAGGAAGCATTTTATGAGCCGCTTGCTTTCCATCACCTGCGGTAAACTCAATTCCTGCTCATTTTGCAGGCGATCAATTCTTGAGGGTGATTTCCAAGCAAGCAACAAAGTGTCAAAGACAACCCGGTTGTTACAGAGCCATTCAGGCATCAATTTTACAAGGGTTGAAATAAGTTCCAGTCCATTAAAGTAACTGTCAGAACCAGTAGCCATGTTTGATGATGATTGGCCTGTAAAACCTTCAGTTATGGCACCAGTAAGTCCCTCATCCTTCACTGAGGAAGATTGATTACCAGCAGCTTCAGTTTGTGAATAGAACTGTGAAAAGGCGCTAGCAAGTATTTTTTGAGGCGATTTTGCAAGCTGGTCCCTTAACTCCCCAGTATCAGAGCAGATTATGTACATGAACCTTCTGAAATACTTTGGATGGCTTAATCGAGCAAGAAAATAGTCAACGGCCTCCACGGCATAGCGGTTCAAAAATTTTGCAAGTGGAGCACGATAAGGACTGTTGATTTCACTATAAAATTGATCTTCAGGAAGTGCCCTCTCTAAATCAATTACCAACGTAACAAGGTCATCCAAAAATTTGCTCGCCGCCGGGGGAAGAAGGTGAAAAAGCTCAATCATAGCTGCAGCTATTTTTGGCTCATCTCCAGCTTTCCAAGATTTTTGACTCTGGGCAAGCTTTTCTGGCTCCAGCCATTTTTTCAAGTGATCCAATAACTTAGCACCTAAAGTGACATTAAACCAGTTTGATAGTAATTCAAGCAGACGAGCCAATCCCTGGAGCAACGGCATGGTAAGACTCCTTGTATGTGCTAAGTTAACTAAGATGGGCCTTAAACTGCTTTGCAGAAGATCTTTTGGCATCCTTTGCTGCTGAACGACCTGACGAAGTCCCTCCTTGGCAACATTGACAATCTCTGTAGTCCTGCATGTCAGAGATTTGAAGAACATTGAGATAATCTTTGCACGTAAGTCGCTATGATTTGGAGCTTTCAGATCTCCCCATGCCATTGCAGTACAGAGTAGTTCAATGCATGCCGTCCTCAATTTGTTCCATGTCATAATTATTTTTGCATTCATCATCTTGGTGACCCAAACAGTCTCATCAGCCTCAGCAATTTGCAGTGCTTCTTGCAAAAAGTTCACGAGCTCAGGAGACAACTTCAGAAGAGGTGGTCTTAGTGCTAAACAGAAATTCAATGCTGTAACAGTACCCACCTGCTGCTCAATGTTCTTGGAACGCAAAGATCGTGAAATCAGAGGCTGGAGCAACGGGAGGTACAGAGGCTCCAGCAATTCAGAGACCTCACTGCCAGTTCTACTTGCAAGCAGTGATAAGCATGCCTGCACATTCTTCCTCACAACAATTGAGGTATTTGGGTTAAACAGTTCCACTGCAAGAAACTCCACAACTCCCTGAAAACTTTGTCGGCGATGTTCACTGTTTGCTTCATCTGCATTGTTTACTACCCGTAGAACTTGTGTTAGGACATGGTTTGTCTCCTCCTGCTCTTTGTTTGCATGCATCGGGAGCCTCTTAAGAACATGGATAAGCCCGCGTACAACTCTAACCTGGAAAATGCATAGGGTATCCACAGACACTTTACCAACCAGCGCTCCAAGGCCCATTACACCACCCATCTGAGCTTGCCATGTGCTACCATAACAACAATGCAACAGGCGTGGCAATAATTCCTCAAATACTGCAACCCGCACACTTGGAGGAGGAGAATAAACTGGATTCAAAGATGGACTAGAAACTAACATGGGGGTACTAGGACCACCTCTTAGCATACCAGTATGCTTCATGCGAGCAAGAAAGAGTAGTGTCTCAGCAAAAGTATTTAAAGCAGACAGAGCAGCTTTTGCATGTTGACGATTTTCACTTGAGAGTACTTCAACCAATGAATCCATAAATATTAAAGGATCCAACTCACGGAGATTAGATGAAGAGTTGTTCCTTGATCTAGATCCAATGCTAGATGAAAGGGACGAACCAACAGGTTGTACATATCCAGACTGACTGGAGGATGAAGAATCGATATGGAAAAGCATAGCAAAATGTCGACATAAATCAACAACGAAGTCATCCTTCTCGTCTGTAAGGCTGGTGTCAGAATTAGCTGCAATGATAGCTACAAGCAGAACCTTGAAAACAGATTTCTCTGCCAGTAGTTGTGTCTTTGTCTTCACACCTAAATCTCCCTTCATATCAGAAGCATCATTGCGACGCCTTGATGGATCCAAAGAAGATATTAGCAGTGTCCCAAGAACTCCAGGGCTCACACCCTCACCGGGTACATTTTCCCGTAAGTTTAACAAAGAATCCAAGCACACTCGAATAAACTGAAGAGCCTGTTTCCTGTAGAAAGCTTCCATACTATTACCTTGCATAACTGCACTGACTGCAAAGTGTATGCATCTGTCCAGTGGAACTAGAAACGGTGTTGCAGGCTCAAAAGTCAGAACTAAACGAAGTCCATGTTCCGGGTTTTCCTTGCATTCAAGTGCGAGGGGCTCCTTCAAAAATCGCCTATTTCGACCCCCTAGCTTACCTAACAGTTCCAAGGACTTTGTACCCCATGTGTAGGGAGGAGGCCTCAAGTGAGACCATAAAGCAAGAATGACATCAGACATTAAATTGGCCATGCTAGGTTCCAAAAAATCAGGGTTGAGACTATCAATCCAAAATTCTAGTGTACGAAGAGCTAAGCTCACAAGGTCATCACTCCCTTTCAGAGCAAGAACGAGAGGTTTCATCAAACGAGGAATGTGAGGCAGCAAAGAACTCAAGCGAGCAGGTAATATCAGGCAAAGCTCCAAAATCAAGTCTCGCATATCTTCACTAGTTGGTCCATCAAGCATGGAGAGCAACATATTGAGGCAAGGCTGTAAAGACGGTATAAGATCACGCATCAATGAATCAAATTTAGCAATGTTCAATGCACGGAACATGCTACGGAGAAGGTGCATGTAACCAAGAGGTTTCTCAACTTCAGTGGCACTCTTCATGCAAACTTCCATTATTACTGGGACATGTGGCTGAAGAGTGCGCTCACAACTTTCTGGGGCCTTTGCTGCAGCGACAAACAAAAAGCGAAAGAGTTGCAAGACAAGCTTTGCTGCAGGCGAATCTGGCTGCTTCAGCGCGTCAAGTTTTGAGCTAACGAGGAAATTAATCAATACATCTGTGAATGGCCGAAGAACCTTGGGAGCTTGCAAAAGGCTAGAAAATATGTGTAACAGCTGGTTGTTTGTTATCATGCAATCAAAGAGGTCTGGCATGCAAAAGGAAAACATGTCCATTATATCCCGAGCTTCCATTATAGCTAGCATTTGGGAAAAACATTGCAGAATGTCTCTCTCCTCATCCTTTTCCTTAAAAAGAGCCAAACAGTGAACCCCAGATTTTAGAACACCCGAAGTCTTCCGCACCTCATCCTCCCGCAGTCCCCTGAATGGTTGTACTGATAAATTTGATGATTGTTGACTTTGTTGCTGTGGGCGTGGCCAATGAGCATGGGTTATGCTCCAGATTATTGTCTTCATTCCTAGTACGAGTGTCCTTATCAGACTTTTGTAATCATTAATCTCCTTTGTGTACTCCAAGGGTGGTTGCAAATTCAGCACAGTCTGTAATGGGACTTCAAGTTTCATTCTCAAATTTTGGTGTTCCTTCCCTTCCTCGCCTTCTTCAAGCAACTGAGGAATTGTGCGCTTCAATGTCCTGAACTTCCCAACAAATGCATCCAGTATACGCCCCAACAAAATCCGTGCTTCATCCATGCTTGGCTGATCAATACCTTTTTCATATATAGGCTCAACCAGATTCAACATCAAACGAGCCGATGTCGTATGAATGACAAGGGTTAGCGAAGAATCATGCATATTCCGAGAGAACAAATAAATGATCCGCGATAGCTGCGGAAGAGAAAGGTCTCCACGAACATAATGCACCAGCTCGGCAAGAAGGGTATAGGCAAGAGGTCTCAATGTCTCGATGCAAACTCGGCCTGTGCCTATCAAAACCCTCTCATCAAGAAGTGTGTCAATCAAGGGAAATAAACCACGCCTGTACTCAGTGTTGAGAACTTGCTTCAAGCCAACTAGCAGCTCCTTCCTTATGGAAACAGAGTCCGGGGGGCATGTAACAAGCAAGTTCACAATGCTCTTGCATATGCTTTCCTCATATGACTTTATATGATCCGCGTTGCTCTTCAGAAGGTACGTCAGGAATGACAATGTCTTGACTTGTGCACCCTTTAACTCAACAAAGGGCGTCTTCAGGTGTGGTGGCACTTTGTCTGGCCCCTTAATAGAGATTGCAGACACCATGAGTGGTAGCAAGTATGGGATATTTGTCTGCACAAGCTTAGCATACAACTGGAACAAAAACATCACTACTAGAGGGCTCTCTGTGACTATCTTGAATGACCGTGCACTTGGATTGAGTTGTCCACCGCCTGGCACTGCCACCGTGCCTGGGGCATCAGCAGTGGGGTCCAAATGCTGGTTGGGCACGGCAGCAGCAATATTGGCACTGACATTGGGATTATCGAAGAAATGGGTGACAGTATTGGGAAAGTTGCGGTATATGGTAACAACAAAATCAAGGAACGGCTGCACCTCTGCCTCGACAGTAGGGCGAAAGTTACGGAGGAGATCAAATACAATCCTGATGGCAAGAAGTGCATTGTCCTCATTGTCCTGTGTCAATACACGAAGAGAGAGCTTGAGCAGGTCTTGCACAAAGGGTCGGAGCACCTCACTGTGGGGTAGCCGATTGAGGATCTCAATCACCACATTCCGCAGCTTGTGCTCCGCATTCTCAGTGCCCTGTGGTGCGGTGAAGTTGCTGAGGATGGCCGAGAATGCTCTGAAGTAGCATCTAAGAAAGTTAAGATAGTCTGGAGTATGAGTCATCTCCAGGCTGTCCCGAACTTCCATGGCAAGCTGCAGTCGGACTTGCACAGGAAGGTCCGGCTCGAGGAGCTTCTGCGAGTGCTGCTCCATGTTGGAGCTGTTGATGGGCGCCATGGCAGCCCCCCACCCCACCACCGCCCAAACCCTACCGCCGCGCCCGCGCCAGGGCTTTTAGGGTTTTTGGAGATCGCGCGGCGGCGACCACCACCACCACCACGCCCCCCGCGCCGCGGGGCACGCGAAGCGGGCGACGAAGGGAAGGGCGCGCGCGCGCTCCGGTTCTCCTCCGCCGCGAGACGCGAAATCGCGCGGCCTCGCGCTCGCGCTCGCGACCGAAGCCGAGGGTTTGGAGAGGGGGAAGAAGGAGGGGGGAGAGAGAGAGAGGAGAGAGAGG

Coding Potentia
Explanation CPC Score
noncoding -1.10518
Genome Browser
Expression
Variation
Transcript ID Chromosome Locus Ref Alt
Osa07LNT0390800.1 7 26890265 T C
Osa07LNT0390800.1 7 26890939 T C
Osa07LNT0390800.1 7 26886509 C G
Osa07LNT0390800.1 7 26886785 T C
Osa07LNT0390800.1 7 26887145 T C
Osa07LNT0390800.1 7 26886719 T C
Osa07LNT0390800.1 7 26894785 C T
Osa07LNT0390800.1 7 26894887 A G
Osa07LNT0390800.1 7 26895209 T C
Osa07LNT0390800.1 7 26896982 A T
Osa07LNT0390800.1 7 26897183 A T
Osa07LNT0390800.1 7 26897899 T C
Osa07LNT0390800.1 7 26898645 G T
Osa07LNT0390800.1 7 26899902 T C
Osa07LNT0390800.1 7 26900327 T A
Osa07LNT0390800.1 7 26900703 A G
Osa07LNT0390800.1 7 26900854 A C
Osa07LNT0390800.1 7 26900862 A G
Osa07LNT0390800.1 7 26903083 T C
Osa07LNT0390800.1 7 26904449 T C
Osa07LNT0390800.1 7 26904990 T C
Osa07LNT0390800.1 7 26905794 C T
Osa07LNT0390800.1 7 26889018 C T
Osa07LNT0390800.1 7 26887873 C A
Osa07LNT0390800.1 7 26890031 A C
Osa07LNT0390800.1 7 26891171 G A
Osa07LNT0390800.1 7 26891172 T C
Osa07LNT0390800.1 7 26906429 A T
Osa07LNT0390800.1 7 26907567 C T
Osa07LNT0390800.1 7 26893484 A G
Transposon
Transcript ID Transposon ID Chromosome Strand Start End Counts
small RNA targets
Transcript ID MiRNA ID Inhibition Expectation Score Binding Start Binding End
Osa07LNT0390800.1 osa-miR5532 Translation 5.0 18.081 1 22
Osa07LNT0390800.1 osa-miR5544 Cleavage 5.0 15.333 1 22
Osa07LNT0390800.1 osa-miR5807 Cleavage 3.0 16.161 1 24
Osa07LNT0390800.1 osa-miR5817 Cleavage 4.5 14.496 1 24
Osa07LNT0390800.1 osa-miR5516b Cleavage 4.5 13.316 1 21
Osa07LNT0390800.1 osa-miR5512b Cleavage 5.0 20.092 1 21
Osa07LNT0390800.1 osa-miR7694-3p Cleavage 5.0 18.464 1 22
Osa07LNT0390800.1 osa-miR1861o Translation 4.5 10.412 1 22
Osa07LNT0390800.1 osa-miR1861o Translation 3.0 18.327 1 22
Osa07LNT0390800.1 osa-miR5079b Translation 5.0 10.164 1 22
Osa07LNT0390800.1 osa-miR5079b Translation 5.0 18.369 1 22
Osa07LNT0390800.1 osa-miR156c-3p Cleavage 4.0 22.182 1 22
Osa07LNT0390800.1 osa-miR156g-3p Cleavage 4.0 22.182 1 22
Osa07LNT0390800.1 osa-miR395b Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395d Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395e Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395g Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395h Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395i Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395j Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395k Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395l Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395s Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395t Cleavage 3.0 12.719 1 21
Osa07LNT0390800.1 osa-miR395f Cleavage 5.0 12.719 1 21
Osa07LNT0390800.1 osa-miR395f Translation 5.0 13.556 1 21
Osa07LNT0390800.1 osa-miR395f Cleavage 4.5 20.203 1 21
Osa07LNT0390800.1 osa-miR166k-5p Translation 4.5 10.083 1 21
Osa07LNT0390800.1 osa-miR166l-5p Cleavage 4.5 15.013 1 21
Osa07LNT0390800.1 osa-miR426 Cleavage 5.0 13.478 1 21
Osa07LNT0390800.1 osa-miR435 Cleavage 5.0 19.911 1 20
Osa07LNT0390800.1 osa-miR439a Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439b Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439c Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439d Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439e Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439f Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439g Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439h Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR439i Translation 5.0 18.261 1 21
Osa07LNT0390800.1 osa-miR395m Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395n Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395p Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395q Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR395w Cleavage 4.0 20.238 1 22
Osa07LNT0390800.1 osa-miR395r Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR1425-3p Translation 3.0 11.281 1 21
Osa07LNT0390800.1 osa-miR1428a-5p Translation 4.5 17.52 1 21
Osa07LNT0390800.1 osa-miR1432-3p Cleavage 4.5 19.697 1 21
Osa07LNT0390800.1 osa-miR444d.3 Translation 4.0 20.567 1 21
Osa07LNT0390800.1 osa-miR444d.3 Translation 5.0 20.329 1 21
Osa07LNT0390800.1 osa-miR444d.3 Translation 5.0 17.767 1 21
Osa07LNT0390800.1 osa-miR1428e-5p Translation 5.0 17.505 1 22
Osa07LNT0390800.1 osa-miR1861a Translation 4.5 10.412 1 22
Osa07LNT0390800.1 osa-miR1861a Translation 3.0 18.327 1 22
Osa07LNT0390800.1 osa-miR1861c Translation 5.0 10.412 1 22
Osa07LNT0390800.1 osa-miR1861d Translation 4.0 18.327 1 22
Osa07LNT0390800.1 osa-miR1866-5p Translation 4.5 12.818 1 24
Osa07LNT0390800.1 osa-miR1875 Cleavage 5.0 14.708 1 24
Osa07LNT0390800.1 osa-miR1862e Translation 4.0 11.829 1 24
Osa07LNT0390800.1 osa-miR1879 Cleavage 5.0 16.131 1 24
Osa07LNT0390800.1 osa-miR1881 Cleavage 4.0 12.576 1 24
Osa07LNT0390800.1 osa-miR1320-5p Cleavage 4.0 17.227 1 21
Osa07LNT0390800.1 osa-miR1428f-5p Translation 5.0 17.505 1 22
Osa07LNT0390800.1 osa-miR1428g-5p Translation 5.0 17.505 1 22
Osa07LNT0390800.1 osa-miR2093-3p Translation 4.0 16.466 1 20
Osa07LNT0390800.1 osa-miR2099-5p Translation 4.0 12.637 1 22
Osa07LNT0390800.1 osa-miR396f-3p Cleavage 4.0 13.315 1 24
Osa07LNT0390800.1 osa-miR2878-5p Cleavage 3.0 18.408 1 24
Osa07LNT0390800.1 osa-miR2923 Cleavage 5.0 11.931 1 22
Osa07LNT0390800.1 osa-miR2929 Cleavage 3.5 21.418 1 21
Osa07LNT0390800.1 osa-miR395y Cleavage 3.5 12.719 1 21
Osa07LNT0390800.1 osa-miR5076 Cleavage 4.0 17.785 1 22
Osa07LNT0390800.1 osa-miR5079a Translation 5.0 10.164 1 22
Osa07LNT0390800.1 osa-miR5079a Translation 5.0 18.369 1 22
Osa07LNT0390800.1 osa-miR5147 Cleavage 5.0 14.52 1 21
Osa07LNT0390800.1 osa-miR5147 Translation 5.0 18.927 1 21
Osa07LNT0390800.1 osa-miR5150-5p Cleavage 5.0 17.106 1 24
Osa07LNT0390800.1 osa-miR5157a-3p Translation 5.0 19.928 1 24
Osa07LNT0390800.1 osa-miR5157b-3p Translation 5.0 19.928 1 24
Osa07LNT0390800.1 osa-miR5488 Translation 5.0 15.401 1 21
Osa07LNT0390800.1 osa-miR5488 Translation 4.0 16.265 1 21
Osa07LNT0390800.1 osa-miR5490 Translation 3.0 18.446 1 21
Osa07LNT0390800.1 osa-miR5491 Cleavage 5.0 16.338 1 21
Osa07LNT0390800.1 osa-miR5512a Cleavage 5.0 20.092 1 21
Osa07LNT0390800.1 osa-miR5516a Cleavage 4.5 13.316 1 21
Osa07LNT0390800.1 osa-miR5522 Cleavage 4.0 17.897 1 21
Osa07LNT0390800.1 osa-miR5837.1 Translation 3.5 15.892 1 21
Osa07LNT0390800.1 osa-miR5081 Translation 4.5 14.924 1 22
Osa07LNT0390800.1 osa-miR168b Translation 4.0 21.607 1 21
Osa07LNT0390800.1 osa-miR5081 Translation 4.5 17.161 1 22
QTL
Transcript ID Chr QTL Gene Character Major Character Minor Marker Interval1 Marker Interval2
Osa07LNT0390800.1 7 nan Physiological trait Eating quality R1245 R1789
Osa07LNT0390800.1 7 qPLLN7 Physiological trait Sterility RM234 RM172
Osa07LNT0390800.1 7 nan Resistance or Tolerance Other soil stress tolerance R1245 R1789
Osa07LNT0390800.1 7 qCIVG7-2 Resistance or Tolerance Cold tolerance RM336 RM118
Osa07LNT0390800.1 7 qLVG7-2 Resistance or Tolerance Cold tolerance RM336 RM118
Osa07LNT0390800.1 7 hd7a Physiological trait Flowering RM18 R1789
pre-miRNA
Transcript ID Pre-miRNA Identity(%) Alignment Length Pre-miRNA start Pre-miRNA end E-value Bitscore
GWAS
Transcript ID Chromosome Locus Trait Value Plus Minus