>Osa07LNT0391000.3

TTGGCAGTGCTCCTCGAATCACACATTACGGCAAGCATCAACTTTAAGACATCTTTTCAAGTTGTTATTGGTAAATACAGGCACGACGACGCGTTGGTCGTCACACGAACAAAGTCAACCAATCCCCAAGTTAAACGCGACCCAGTTTGGGTCAGGAACCCCTTTTTTTTTTTTTTGCGTCGTCAGTCAGCAGGTGCTCTAAGAAAAACACGAGCAACAGCACCGAGAGGATTTGCCACCGGTGCATGACGGACACTCTGCAAAGCCAGCACCACAGCCATCGCACAGCAACAGCTCCCTGCAGAAGGAATCCGCTTTCTGTATAAGAATTTATCTCATCAAGTTTAGCAGGAGGCTGTTGGGATGCTGCGCTGCACTGATCGATCCATGTTGACAACACCATCCCTTTGATGCCATGATGCTTCCGCTGGTTGCGACATAGCTCTCTCGCTTTCTATCAGCTTGGGGGTTTCTGATGTTCTCCCAACTCCAAGCAGAGGGTGAGTCGGAGAAGGAGCGACGCAGGAGAGGTGTTGTTCTGTTGGAGAGCCTGAAGAGGACGACGGCATTTCAGTAGCAGCATCTCTGTTCAGATGGCTAGCTTCTGACGGTACAAATACAGTTAGCTCTGGTTGCACCGCTCCCGAGCTGCTGCCGTTCATTTTCTGGCTCCCTGCAGGACCTGGATTTTCGGAATCCCGGATGTGCACAATGATTATCGTAATGTCATCCGTCCTGTTTTCATGCTCCAGCCATAGTTTGTACGACTCTGCAGCAATTGCTGAGCAAGCTTCCCGGGGATCTTCATATGCAGCCACCATGTCCACGACATCCTGGCTGGAGAGAAACTCAAACACGCCATCGCTTGCGACGACGAAGAATAGGTGGGCTGGAGTGATCTCTACACTTTTCACCTCAGGTTCGGCGATGACACCAACAGCCTCGGCGGCTTGGTCGCCGAGGCTGCGCGTGAAGGCCGTGCCGGGGTAGAGCCCGTCGCGCGCCCACACGCGAGGTGGGTCCCCCTCGTCGGCGACCCAGCTCTCCGCCTCCGGGTCGCGCACGCCCTCCACCTGCTCGACCGACATCACCCGCGCGCCGCACGCCTTCACGCGGGCGCGCTCGTCGGCGCGGAACGGCGTCTGGTCCCACGAGAGCTCCTCCGCCGCCACGCGCCCCTCGCGCCAAACCCCGGCCACGGCGCGTGAGTCCCCCACGTTGGCCACGTGGAGCGCACCCCCCGCCACCAGCGCCGCCACGGCGGTGGTCCCGCTCATCGAGTCGTCCACCTCGTCCGCCGCGTGCATCTCCGCGTTCGCCGCCGGGAGCGCCTCCCGGAACGCCGCCGCGGGGTCCTCCACCACCACCATCCTCCCCCCTCCCTCCTCCCCCGCCCCCACCCCCACCCCCGCGAGCAGCCGCGGGAGCGCGTCGCGCGCGAACCCGGCGCACGCGGCGCCGCACGCGCCGTGCCCGTCGAACACCGCGAACAGGTGGAGGTCGGGGTGCCCCGCGAACCGCGTCGCCACCAGGTGCGCGTCCTGCGACTCCCTCCCGGGCGAGTCCGGGTACAGCCCCGCCACCGCCAGCGTCGCGTACTCCAGCACCAGCCCCGCCCCCGGCACCGCCACCCGCCCCAGCGTCGCGCCGCCGCGCCCACCCACCGCCCCGCCGCCGCCGCGTCCCCTCTGCCGCCGCGGCACGCAGCACTTCCCCTGCGCGCACCCCATCGCCGGGCTAGGGTTCGCCGAGTGCGCGATTGCTTTTTGGGAGTTTACAAATCGGAAGGGGAATTCGGAAGAGGAGGAGAGAAGAGAGAGAGATCGAATGATTCAAATGGCACTGTGCTTGTGTGAGAAGAAGAAAGGTAAATTAATAAATGCAACGAATAAAATAAAATTTAAACAAAAAAAAAAGGAGGCGTCAAGTGTGGAATTCGT

Explanation	CPC Score
noncoding (weak)	-0.966775

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0391000.3	7	26963810	C	A
Osa07LNT0391000.3	7	26964336	A	G
Osa07LNT0391000.3	7	26964388	G	A
Osa07LNT0391000.3	7	26966363	C	T
Osa07LNT0391000.3	7	26967227	T	A
Osa07LNT0391000.3	7	26964039	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0391000.3	osa-miR5833	Cleavage	4.5	22.438	1	21
Osa07LNT0391000.3	osa-miR171f-5p	Cleavage	3.5	14.565	1	21
Osa07LNT0391000.3	osa-miR169r-3p	Translation	5.0	22.0	1	21
Osa07LNT0391000.3	osa-miR1856	Translation	5.0	20.667	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0391000.3	7	nan	Physiological trait	Eating quality	R1245	R1789
Osa07LNT0391000.3	7	qPLLN7	Physiological trait	Sterility	RM234	RM172
Osa07LNT0391000.3	7	nan	Resistance or Tolerance	Other soil stress tolerance	R1245	R1789
Osa07LNT0391000.3	7	qCIVG7-2	Resistance or Tolerance	Cold tolerance	RM336	RM118
Osa07LNT0391000.3	7	hd7a	Physiological trait	Flowering	RM18	R1789
Osa07LNT0391000.3	7	qLVG7-2	Resistance or Tolerance	Cold tolerance	RM336	RM118

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus