>Osa07LNT0391700.1

GTTACTTTGTTCGTCCTAAAATAAAATTAATTTTTTTTGTCATTGAGTATGCACATAACAGAACTATGGGCACATTTGAGTATGCAAATCAAGAACATACAACAGTATGCGTGACAAGGCATCGCGATTCACGAGCCATCCGCGGAATTCATTTCGATCATAAGGCTAAACTACATAGTCTCATGTACTGTAGTAAACAAGAGCTGAGCATGCCTCATGTATATCTTCTGCGCAAGAACGGCGAAAAGATCAGAGTTCATTGATGTATTCTTCTTTTTTAGAAGCTCCTCGTCTGCTAACCGTGAAGCTGACATGAGATTGGGTCCATTGATATATTCTTCTTTTGTTGGAAGCTCCTCGTCTGCTAACCATGAAGCAAGTCCTTTTAGGAGACAGTGACACCATCGAGTTCTGCTTGAGCTACTGCTGCACCGATTGCATCGATCACCTCCATCTTGCCCTTCGTCACTGCTTCATCCATAGGGGTTTTCTCATGGCTGTTCAGTGCACTGACACTAGCCCCAGCGCATATCAACGCTTTAATTACCTCGATATGTCCATTGAGGCATGCCCAATGGAGGGGTGTGTTCTTCTCTGAGTTTGTAGCATTAACATTCGCTCCATTTTGGATCAAGTACTGCACCACAGCGAGATGTCCATTGGCAGAGGCCATATGAAGTGCCGTTCGTCCTTGCGAATCCGCGGAGTCTAGGGAAACACCGGCGGTGAACAGCGCGACGACGTCCTCCAGGTCATCGTACCTAGCGGCGTCGATGAGATCCTGCGCCTGCTCGGCGGTCGCCGCCGCCGCCGTTGGTTGCTCCGATTCCGCGCCCATCGCCGCCGCCGCCGCCGCCTGGAGCTGAGGAGATGTGTAGAACTGCGG

Explanation	CPC Score
noncoding	-1.16143

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0391700.1	7	27775390	C	T
Osa07LNT0391700.1	7	27775419	A	G
Osa07LNT0391700.1	7	27775551	C	T
Osa07LNT0391700.1	7	27777430	C	A
Osa07LNT0391700.1	7	27777279	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0391700.1	osa-miR1855	Translation	5.0	17.681	1	21
Osa07LNT0391700.1	osa-miR1871	Cleavage	4.5	17.598	1	24
Osa07LNT0391700.1	osa-miR5147	Cleavage	3.5	19.162	1	21
Osa07LNT0391700.1	osa-miR5487	Translation	5.0	12.54	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0391700.1	7	qDTH-7	Physiological trait	Flowering	S10832	RM1306
Osa07LNT0391700.1	7	qPLLN7	Physiological trait	Sterility	RM234	RM172
Osa07LNT0391700.1	7	S23(t)	Physiological trait	Sterility	R1789	C213
Osa07LNT0391700.1	7	nan	Morphological trait	Seed	RM118	RM248

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus