>Osa07LNT0393100.1

CTATATTCTACAATTCTCACTAACTTGTACAAATATGAAAATTTTGACATACTTTTGCCACAAATTTGATAAAATTTAGACAAAAACTGAAAGAATTTAGGCATAATTTTGACACTTTTTCTTTACAAAACTAGAAGACAAATAGCAAGCTGCAATCATCCCAAAATCAAGCAGATCCAAATCACAAATTAGAGCAACATCCCCTGTCAAAAAAAAAGAAGAAAAACTCAAGCAACTCCTCCCAGCCGCCATCGCCTCCAGTGCCGAGCCGCGGCCGCCATCGCCTCCTCCCGCCGCCTAGCCCGCGCAGAGCGCGCGCCTGCTCACCAGCGAGAGGAGGTGCGCATGGCCGACGCCCGCTCGTCGCCGCCGCCCACTCGCTGCCGCCGCCACCATTGCCTGGCTGGGTTGCCCCCGTCGCCTCCTGCGACGAGCCGCCGTAGCCATCGCCTCCTCCCGCCGCCTAGCCCGCGCAGAGTGCACGCCTGCTCGCCGGCAGGAGGAGCTGCGCCTGGCCGCCGCCCGCACGTCGTCGCCTGGCCGCTGCCCGCACGCCGCCCAATTCGTCGTCGCCTGTGCTGCCCAGATCGGTTTCGAGAG

Explanation	CPC Score
noncoding (weak)	-0.959129

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0393100.1	7	28239309	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa07LNT0393100.1	DTM_#DNAt_MULE_japo_Os0709	Chr7	.	28238724	28239813	599

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0393100.1	osa-miR5079b	Cleavage	3.5	9.713	1	22
Osa07LNT0393100.1	osa-miR1428b	Cleavage	5.0	10.76	1	21
Osa07LNT0393100.1	osa-miR1428c	Cleavage	5.0	10.76	1	21
Osa07LNT0393100.1	osa-miR1428d	Cleavage	5.0	10.76	1	21
Osa07LNT0393100.1	osa-miR1879	Cleavage	3.0	7.128	1	24
Osa07LNT0393100.1	osa-miR5079a	Cleavage	3.5	9.713	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0393100.1	7	qDTH-7	Physiological trait	Flowering	S10832	RM1306
Osa07LNT0393100.1	7	S23(t)	Physiological trait	Sterility	R1789	C213
Osa07LNT0393100.1	7	qPLLN7	Physiological trait	Sterility	RM234	RM172
Osa07LNT0393100.1	7	nan	Morphological trait	Seed	RM118	RM248

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus