© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0035900.1
CAGTGAACTGTATAGATTGTAGGCCAAATTAACTTTATTAGCATGGCTTCCAGGTACAGGTTTAGCTGCCCTTCAAAATAATTACAAAGAATATTTGACATAAAAGAATTGCTATGCCATTTCTATCATTTTTTACGATGTCAAACAATATACAGACTAGCGAATAACCTACAAACTGACACAGTTATGGCCTACCAAGGTACAGAGTGAATAAATTACGGATGCTGAAGTTTGCTTGTAAAATCTACCACTTCTAACGTTTCTATCTCGGTGATTTTGTGGAAATGCATCTTCCGCACAAGATAAGCCTTGATACAGCTCGTGACCTTCGAGACCTGACCCTCAACGAAGATAGCTTTCGTCGAGTCCTTGAAGTTCTCCAACAAAGTATACTCCTTGATCTAGGTTCCAATCTCAAATTCTCTTGTTCCAGTTTTTCTGCAATTGACAAAGCTTTTTGTCTAGACCAGCCTCCTCGTTGAGAACAAGCTTCTGCCTTGCCAATAACATGAGCAAGAGATACCTTTCCTTTGACTATGCTGTTCTGTCGACGCTGTTTATTCCCATTTCTTCCTTGATTAGCCTTGCTATTTGGTGATGCCAAAGATTCTTCTTCCCATACATTGTCCTTTCTTCTTTGATTTACATTATGCACATCATTATTTGTTTCGTCATGCCAATGCATGTGTGAAGGCCCAACTTCAATGATTTCTCCTTCTGTCAATATATGAGGATCAGATTGCATCCATGTGGTCTTACTAGAGCTTGCTCTGTCTTTTTTAAGCCTCCTACGGAGATTCTCACCTCCAGAAGAGAGTGGACTATGTTTAGTGAAAGACCTCCTTAATGTCGTGTTGGAAGACTCGTTCTCCCCGTGAGAAAATACAGCTGGAGCATGACTGGCCCTCACATCATTCTTTGATTCATATCGAATTTCAAGAATTATGGCAGAACGCAGAACAGACTCAAATGCCTGCAGGATTTGTCCTCGGTAGTTTTCAGCTTTGGACTTGTTGACACGTGAGCTGAATATCAGCTGCACTGTTGGTGCTGTGCCTAGGCTGACGGAGCTTAGCCTTCCCTCTTTAGCCATAATTTTCCTCAGTGTATCTGACTGAATACTCTCAAGCACAGCATGCCAAATCAGTTCATTTTCGATTTTACTATTTCTAGATTGTTCATTTGCTCTGGGAGCACTGGTTGATAACAAATGGCTATTTGATGTATGTTCAACAGGTCTCCTTTCCCTATAAGAAGTGCTTGCCATGTTACCGTTATGCTCGAGAGCCGAGTGTATTGCCATATCCCTATCGGGAAAGGAACCGGCTAACACACCATGGTTTAAACTCGTACTCGATGAACTTGGCAGCACATACTGTTTGTCAGGAGCAAGCTGAAGCAGAGCAGCTGTAAGCCAGGTTGTCTTGTCATTAGAGACCCTCAACTGCTTTTCAGCTTCAGATAGTGTTTTCAAAGCCTGGCGTAGTTTTTCCATGTCATCTTTGGACAAGGTTGGACGTTTGAAGAATTTTCTCCGTAGTCTTTCTCGTGTGAATGTATAAGAACCAGCAAGGATGTCCGTAATTATAGTGGCAAGTTGAGACATCAATGCCAAAGGATCGACCCCAGTTTCTGTAATGTCTCTTAGAGTCTTTACTGTATTTACAGTGTCAGCAGAAAGTGCCAAATCAAGCAAATCTACCAGTTTATCATCAGACACCAGACCAACAAGTTCTTGGACAAGAGATAAGGAAATTCTCTGCCCCAGCAAACTCAGCTGATCAAGAGTCATCTCAGCATCCCTCAATGATCCATCTGAACGGGATGCAATTAACTTCAGTGCATCCCTATCAACATCTAAACTTTCGCTGGTCGAAATCCATTGCAAAGTGTTAACAATGTCGCACTCCTTCAACTTGGGAAAGAAGAACTTCTGACATCTCGATAGGATTATATGAGGAAGGTCGAGGTTGGGACTGACGAGGATGAACACCACGCGGCGGGGCGCCCGGTCCACCACTTTCGAGATTAAGCTCCAAGTGTCGGCTGGCAGCGTATCGCAGTCATCAAATATAAACACCCTGTAGTGCGAAGGCGCCGGCGAAAGCATGACGTTGTCGAGGACATCAACGATGCCGTCCATGTCGATGTTGCCGACGGGGCCAATCTCCATCACGCTCCTGCTCTTGCCGAGATTGTGCGCGATGCACGAGGTGCACGAGTCACAGGGCCTCGGGTGCTCGGGGGAGTGGCAGTTGAGCGCCTTGGCGAAGACGCGCGCGCACGACGTCTTCCCTGTGCCGTGCGGGCCGTAGAAGACGTATACCAGCCCGATCTTCCTCCTCAGGACGGCGTTCGACAGCGCCTGCACCACCAAGCTCTGCCCGACCACGTCCTTGAAGGTCTTGGGCGCGAACTTCTGCGTCAGGCTCCGGTGCCGTCCGCGGCCGTGCTGCGAGCCACGAGACTTGTGCCCCGACCGCCCCTCCGACAGGAGGTCGGACTCCATCTCGCTGGTCTGGTTGGAGAAAATTCCAAGCTCGCCCGAGTAGCTCCCACCGATGCCGCCGTTACGCGCACCGGTGGCGGCCGCCTCGACGAGCAGAGGCAACGCGTCGGAGTCCGAGCTGGTCGAGGAGGCCAGCCTCTCGGACTTGACTGGGAAAAGCGAGTGCGAGCCGTTGAGGTGGCCACGCGAGGCGCCGGCGCCGGCTTCGGATTTGCGGCCCGCCGCTGACTTGGGATCGGATAGGCCGCAGGCGAGGCTGCGGCCGGCCATGTCGAGAATAGACTTGCCGCGGTGGTGGAGGCGCGACCAGTTCCACGGAATGCCGCAGACGTTGCGCGAGTCCTGCGGCGGCACATGCTGCTGCAGCTCGTCGAGGCCGTCCTCGCCATCGCGGAAGAGGTACTTGTTGCCGCAGACGGCCTCCTGGGAGCTGGAGTTGACTGAGAGCGCCGCCGCGGCGGCGGCGGCGGCTGCCGAGCGATCTGGGGCCTTACTGGCGGCGCCAGCGCGGCGGCCAGCGCCGCGTTTAAAGCGGCGCGGCGGGCGACGAACCTGCTTGGGTTGAGGGTTCTCAGCGAGCTGGTCGAGGAGCGTCTTGAGCGCCCCGGTCGTCGAGGCGCTGCGCCGGGACTTCGGCGGGAGATCGGCGTCGTCTTCGTCGGTGTCGGCGTCCGGGTCGGCTGCCACCTTGGAGGATGACTCAACGGAGCGGCGCGTGGACGGGTCACGGAGCGACCGCGAGCGCTGCAGCGCGAGGAGGTCGCGCATCAGCGCCGCCGACGCGACGGACGTGGGGCTCCTCCTCCTCCCCGACGACGACGCCCCTCCGCCTCCACCGCCGCCCCCGTGCGCGTGGTGGTGGCGTAAGTGGATGCAGTTGGTCAGGTGCGCGTGGCCGCGGAGGTGCCCGCCACCACCACCACCACCCCGCGCGGTGGCGCCGACGGCACCGGCACGGTCGGGCGTCGGCATTGCTTTCCCCGCAGCACGGAGCGGCAGTGAGATGCGAGGAGAGCTCCGGCGAAACGCTACGCCATTTGGGCGTCGGTTGGGCTGGTGCGTGGTGTGCGTGTGCGTGCGAATTATGGCGGTATGGTTCGGAGATTTCGCCTTTTTGGTTGGATCCCTGGAGGATTTCACGGGAAGGGAGAGAGAGAGCCGCGACCGAGTAGCCGAGTAGGGGAGGAGAACTGGGAGGAGAGGGTGGGTGGCGAGTGGCCTCGCGCTCGTGCCGGGTGTAGGAACGGGCGGTGCTTTCGGGGCTCGCGCCCGCGTCGCCGGGGCAGGAAGGGATAGAGTACGGCGCGGGGGAAGCGGATCCGCGGCTCGGCGACGGGGGCGGCGGTGTCACTGACTGAGTCACTGGTGTGGGCACGGAGACCGGGTTTGGCACAAGCGCGCGGCCGCGGCTGGGAGGGGGCGATTCACTGTGGTGCGTTCGCTCCAGTGGCATTGGCGGCTTGTTGCTGGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0035900.1 | 1 | 30491394 | T | C |
| Osa01LNT0035900.1 | 1 | 30491655 | G | C |
| Osa01LNT0035900.1 | 1 | 30491674 | C | T |
| Osa01LNT0035900.1 | 1 | 30491889 | G | A |
| Osa01LNT0035900.1 | 1 | 30492003 | C | T |
| Osa01LNT0035900.1 | 1 | 30492463 | C | A |
| Osa01LNT0035900.1 | 1 | 30493078 | C | A |
| Osa01LNT0035900.1 | 1 | 30493307 | C | T |
| Osa01LNT0035900.1 | 1 | 30494941 | A | G |
| Osa01LNT0035900.1 | 1 | 30495019 | T | C |
| Osa01LNT0035900.1 | 1 | 30495826 | T | G |
| Osa01LNT0035900.1 | 1 | 30496289 | C | G |
| Osa01LNT0035900.1 | 1 | 30496549 | T | C |
| Osa01LNT0035900.1 | 1 | 30491682 | T | C |
| Osa01LNT0035900.1 | 1 | 30493262 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0035900.1 | osa-miR390-3p | Cleavage | 5.0 | 21.599 | 1 | 20 |
| Osa01LNT0035900.1 | osa-miR1862e | Cleavage | 3.5 | 12.683 | 1 | 24 |
| Osa01LNT0035900.1 | osa-miR1846e | Cleavage | 5.0 | 14.041 | 1 | 20 |
| Osa01LNT0035900.1 | osa-miR2875 | Translation | 4.5 | 12.864 | 1 | 24 |
| Osa01LNT0035900.1 | osa-miR3979-5p | Cleavage | 5.0 | 22.413 | 1 | 20 |
| Osa01LNT0035900.1 | osa-miR5148a | Cleavage | 5.0 | 12.189 | 1 | 24 |
| Osa01LNT0035900.1 | osa-miR5148b | Cleavage | 5.0 | 12.189 | 1 | 24 |
| Osa01LNT0035900.1 | osa-miR5148c | Cleavage | 5.0 | 12.189 | 1 | 24 |
| Osa01LNT0035900.1 | osa-miR5497 | Cleavage | 4.5 | 14.293 | 1 | 21 |
| Osa01LNT0035900.1 | osa-miR5509 | Cleavage | 4.0 | 12.228 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0035900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0035900.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0035900.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0035900.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0035900.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0035900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0035900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0035900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)