© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0394500.1
ACACAGAGGATGGATGCAGTGAAGATGCCCTTAATCAACAGGTATCGCTCGCTGATGGCCCTGCTGGCTTTTCGCCTTTTGCTCAAAATATATTCGATTCTCTCGGTGAATCGCAAAACAGTGGAGGGGCCTTTTCTTTTAGTCAAGTGCAGCAGCAACCGACACGAGATTTCAGATCCGTGCGGTAAGTTGCCACAAAGTTTCTGTCCCAGTTATGCTCCATTGATTCAAATGGCCAACAACTTTACATGAATGCTTTTCTCAAGAGCTGCAAATGCTTCGTTGCTATAGCTTGCTTCCGTGCCGAGTAGTAGTAGTAGTAGTATAATACATGTATGTAAAATCACGTGGTGAACTGTACTGCACTGTACTATTGGCGGTTGCAAGTGTAAAATTATTTACTGAAAACCAACTCTATACTGTGCTATCATATATGAAGAGTTTGAGATCACTGGCTGGCAAACCACGTAGAAACCATGAAGCAGAAAAACTTTTTACACCGGCACAGCACAGATGACAATCATCGCTACCGTAGAACAGAAGAGGCAGAGAGATCAGCTACGTTTCAGCACTCTTGATTTGGCAGACTTGTGGGGGAATTTATTTTTGTGGCAGCTGGTGCACAGCCACTCTCCTCCATCACCTGGGGTAGCTTCAGCTTCAGCTTCAAGGGGAATATGCATCCGGGTTCCATTCTCCTCGTCACTGCCACTGCCACAGATCAGCATCAGTCCTCCTTCCCGGTCGTTGGATCCACAAGCCGAACAAGTTGGTTCAGCTGCATCGCCTCAGTTGCCTCTCCAAGCACGTCGTCAAGCTGGCCCTTGAGTAGCTTCGCATGGGACTTGTCTGCCAGATCGTGCATGTTGAAGAGGACATGCTTGTTTAGGGACTGACCTGGCTTGCAGATGTACTCCACAAGATAATCTGCGCTGATGCATGGAATGCCCTGCCTCTTAAACTCCTCTACCCATGCATCTGCGCTTGGCGTCCCAGCAGATACAACAGCGAAGTCGACGTGATCAGGTTTCTTCAAGAACCGGGTGTAAGGTGGGGAGGTTGCCAAGATGGTGCCATCGCCAGCTCTCACCGCGCGCTTCAGTGTATCCAGTGATGGAGAAATGCACTCCCCGTATATAATTATCTGCATCCCGTAGAAAGCGCCATGGCCAGTATGCTGCCTTAGTTGGCGCCATTTCCGAGGAGCATCCAAACTTATAGTATCACCATTGTTAAGGCCATTACCATGCCACTCAAATGGTTCTTCCTCTAAGAACTTCCCAGCCTCATTACAAGCAGTCAAATAATCAGACTTTAGTATCCACCTGCCAGCGGCAGCTGCCGCAAAGAATTTTTCAGTTCTGCGGAGCTCAGGGGAGATAAAATGAGTTGCTTGGAAAGACCATTGATGCGAATCCCTACAAACTCTTCCCTTCAGGCGTCTAAGTATCAACTTATACTCCTTTCTCAGAAGGCGATGCCCACTCAAAATAAATAATCTGGGCTCCAGCACAGTTAACATTCCACAATCGTTTTCTTCTACCACACCGCGGTCAGCAAGCCTGTCTTTGCCACTTCCTGCAGCTTGAATAAAACTGTTCAGACTCGTACAACTGTTTCCATATTTTGATTTGGAAATATTATGATTCCCTGGTAGGTTCTCCTTGTCATGATCAGTAGAACCATCCATTAAATCTGCTGCCTTTTGTCTTTTGCTGCTTCTTGCTTGCGAATTTTGCAATATTTTCGATCTATCTCGCATGTCATCTTCAGAAAATGATACACCGGCATCTCTGGCCCCATCCTCATTGGAACTCTGAAGATTCTGATCCATTGTTTTCTTGCTACCATTTCTAGGACCCTCTGAAGCTCTCTTATACACAAATTTAAATTCAGACACAACAGCACTGCTGTTCTTGCAAGGCACATCACCAAAGCTGTTTTGCTGGACAGCAGATACTTTCCTCTTGGCTGCTGCCTTTCGTACTCTGTTGTTTGGTACAATACTGGGGGTGCATGTTTCAGGGCCACCCATATTTGTGTTGGTTGAGAGTCTCTTAGGGCAAGATCCTGCATTTTCTGGAGGAAACACTTCCTTAAAACCTGACTTTGAAAACATGGCTCCAGTGCTATCAACAATTGGAGCATCAGGCATCTCGACATCAGCTGTTTGAGATACCTTCTCACATGAACTCTTTCGATATTCATCAGCACTTGCACTGCCAGGATTTTTCTCTGCTAACTCAGTCTTGGAAAGTGCTAGTGCTGTGTTCATCTGTAAAGCATCCCGCGAGTTGTTGGTAGCTGCATTATTTGCTTTACTATTTGGGATTTCTTCAGGAATGAATACTGTACATTCAGCACCATTTGGTCTAGCATGATTCTTTTCTGGTTGCACCTCAACTTTATCACCATCAGACTTGAAAGATACAATCTCATCTTTGTTCTTTACAGATCTAGTGGCTGCTTTATTTGAGGCATTCCCAAACCTCTTGACACTGGCATTCTTCACTTTAGAAGTAGGTTCTTCCTGGGGAAATGTTTCGCATTCACTGATGGTTGCAGTAACTTGGATCGATTTAGGAACCACTTCCATGTTTTGATGAGAAACCACAATTGCAAAATCCGTGTTAGGAGCTACAACTTCAGTTTTGTCAACCTGAGGCACATCACTCATCTCAGTGTCCCTGTTTTGAAGAGATGAACTAGAACTTCTTTTGTCAACTTCAGAATCGGCAGATGAGTTTGCAGCACAACCTTTTTCAGACCTTAGACCATTTTCAGAACTAGAACCTCCTTTGTCAACCTCATGCAGTGCAAGTGTATTTTCTCTCAGTGATTTCTTACTCTTAGTAGAGTTTTCAGAAAGCTTTTCTCCTTCAACAGGCCTTGCAAGTTTCAAGGCCCTCCTATAGCTCAACAGGTTGCTTTTAGATTGGCCAGACTTTTCTTTTGCAGTTAAAATCACAGATTCAGCAGAGTTTCTACTGGGATCAGAAAACGTTGCTGCTTCAGATGCACTTTCCCTGCTTGAGAAAGGACTATTTGCAGTTCCAGTTTCTGAGCTTACGGATGGCTTCATACTGATTGAAGAAAGCTTACTTGCCCTCTTCTGAGCGAGTGCACCACTTGATTTATTCACCTTCTTTACTATCTCAACGTCTCTCAGGCTTTCAGCATCAGTAATGTCACTAATTTTGTGATCACTTTTCATTGATGGAGAGATAGTAAAGTCAACCCTTGGGGTAACTCCCTCAAAACTTTGTGGTGATCCTGTTGGTTTTAAATTAGCTTCTGGTGACACAGACTTCCGGCAACGTCTTCTGTTGTAACTTAAGACTTGGCTATTCTTCTTTGATGCTGCATTGCCTGTTAATCTCAAATTAGCCTCACACAAAGTTAGCTCCCGTGCAGTATTTGACTGATCAACTGCAGTATTAAGATCAGGTGTAGATCCACCATCCTTCTGGCCTACATTTCCACTTATACCTGATGGCCGTAATGTTTTCTCTGAGAAAGTTTCTTTGGAAGGGGTTGACCAAAGTGCAATGTTCACATTGTTCTGATTACTGCTATCCAAACAATTTCCACCAATGGTCTCTGTTTTGTCCACCAACATAGCAGGTGCAGTAGTTGATTGATGCACATGATGATCAGAACAAACTGTGGTCCCAGCTATGTTGGAAATACAATGTGCACCAGGACTAGCATCAACTGCCATTTTAACATCATCTTTGGCTTCAGCTCTGTGGACCTGAGCTGCAGGAGCCTCTTCCTTGCCATTAAGAGGAAAATGGGCAGATTCATAAGCATCAGAATCAGCAGATATTGGAGTATTCCGTATGTCTGATTTAATGTTGAGTGATCTACTGGTTGAACCTCCTGCTTTCGTAATCCGCTCTGGAGTGCTCATGTGTCCTCCAGCAGTAATTTCTGCACTGCAAGAGGAGATAGTAGGATCTCTAGTGGGTGCTTGACTATGAGGATCAACAAGAGTAGCCATTCTAATATCTTTAGTGCGTGCGCTTCTAGTTGCACGTTTACTATGAGATGAGCTTCTACCAGCTTCTTCTTCATCATCTTCGGAGTCCTTGGCTTGTGCTGCCATTATCTCTATTTCCCAACCGCTTTTCGTATAATCATCAGCTGGAAGAATTTTCCATGCCATTAAGCAATCTTCCAGCCACTGATGATTAACCAGACTGACATTTGCCCGTTTGGCGGTATTTTCCCGTTTTGCAACTTTGTACTTCTCACCTTCAAATTTATAGCAAATGAGATGGGTGTCTTTGAGCGCATCAAAACTCTTGGAGAACTCTGCTCCCATCAAAGAAGCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0394500.1 | 7 | 29345896 | A | C |
| Osa07LNT0394500.1 | 7 | 29343339 | A | T |
| Osa07LNT0394500.1 | 7 | 29343553 | T | C |
| Osa07LNT0394500.1 | 7 | 29343696 | A | T |
| Osa07LNT0394500.1 | 7 | 29344452 | T | G |
| Osa07LNT0394500.1 | 7 | 29344965 | A | G |
| Osa07LNT0394500.1 | 7 | 29345664 | T | C |
| Osa07LNT0394500.1 | 7 | 29345693 | T | C |
| Osa07LNT0394500.1 | 7 | 29346523 | A | G |
| Osa07LNT0394500.1 | 7 | 29347694 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0394500.1 | osa-miR5541 | Cleavage | 4.5 | 15.302 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR5542 | Cleavage | 4.0 | 14.955 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR5542 | Translation | 4.5 | 18.069 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR5079b | Cleavage | 4.0 | 18.525 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR5079b | Cleavage | 5.0 | 21.432 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR166c-5p | Translation | 4.5 | 17.068 | 1 | 20 |
| Osa07LNT0394500.1 | osa-miR166d-5p | Translation | 4.5 | 10.549 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR319a-3p.2-3p | Translation | 5.0 | 15.168 | 1 | 20 |
| Osa07LNT0394500.1 | osa-miR319b | Translation | 5.0 | 15.168 | 1 | 20 |
| Osa07LNT0394500.1 | osa-miR166g-5p | Translation | 5.0 | 24.962 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR166h-5p | Cleavage | 4.0 | 10.549 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR171i-5p | Translation | 4.5 | 17.888 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR417 | Translation | 4.0 | 18.543 | 1 | 21 |
| Osa07LNT0394500.1 | osa-miR1876 | Translation | 3.5 | 14.482 | 1 | 24 |
| Osa07LNT0394500.1 | osa-miR1862e | Cleavage | 4.5 | 17.339 | 1 | 24 |
| Osa07LNT0394500.1 | osa-miR2095-5p | Translation | 5.0 | 23.616 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR2099-5p | Cleavage | 4.5 | 12.785 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR2101-5p | Translation | 5.0 | 12.812 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR5079a | Cleavage | 4.0 | 18.525 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR5079a | Cleavage | 5.0 | 21.432 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR5150-3p | Translation | 5.0 | 16.269 | 1 | 24 |
| Osa07LNT0394500.1 | osa-miR5151 | Cleavage | 5.0 | 17.453 | 1 | 22 |
| Osa07LNT0394500.1 | osa-miR5492 | Cleavage | 4.5 | 14.174 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0394500.1 | 7 | S23(t) | Physiological trait | Sterility | R1789 | C213 |
| Osa07LNT0394500.1 | 7 | nan | Resistance or Tolerance | Drought tolerance | RZ978 | RG351 |
| Osa07LNT0394500.1 | 7 | qPLLN7 | Physiological trait | Sterility | RM234 | RM172 |
| Osa07LNT0394500.1 | 7 | nan | Morphological trait | Seed | RM118 | RM248 |
| Osa07LNT0394500.1 | 7 | qDTH-7 | Physiological trait | Flowering | S10832 | RM1306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)