© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0036200.1
GCGAGTTTATATGGACTTTTGGTATCTGGGGCCGTTCAGTCAGTGTAAAAAAGAATGAAATATCATACATGTCTTAGACAGTTGTAACTTGTAAGGCGCAACATTGTAGAGCTCATACATATCATACATGTCCTAGACAGTTGTATCACTAGCTTGAAAAGAACTCATAGGCCGTATGGTATTTGTCTAGTACAACATTGTAGAGCGGATGGATCGGCTCTAGCAAGTTTGAGTAAGGACCAAGCACGTGCTGCGGCAAGGGGCACGCATCAGAATCAACCATGGCGCTGTACTGGCTAACTGACAGACCACTCAGGCAGTAGCACGAGTGGTAGTGATCTCTGTTCTTCCCAGGCTTATCCCTCAACCCTCCATCCAGCACCTGTGCGCAAAGCAGGATGTATTGCTGCAGCGCGATGTTGTGGAACAGTGGGCCTATTTGGTTGCTCTTCTCTATAAAATCAAATCCAAACTTAGCATAATATGCTGCTTCAGTAGAAGAGCTCGTACCACAAGCATCATCTCCTGGAGGCCTTTTGCTGGAATATGATGATTTTAATTGCTCATCAACAACTGTCATTAGTTTTTGTGTTAAAGCAAGAGCAGCTCCCTGCCAAAAGGAGTAGCAACCATCAACCAATTTATTAGTTCGTCCTTGAAATCCACATTCCACTCCTTGGCGAAATGCCACCCAGCCAATCAAGCTAGCCAAATCAAGTTTGTCCACTTCGTTAAGCAGGATCATCGTAGCCAGCCCACAAAAAGTGTACCCACCATGAGCTTCAGCATACGGTTCCCCAGCAATGCCACCTTCATAGGTTTGACACCTTGTTATGTAATTTCCAACACCTTTTGCTAGTTCACCATCAAGAATGTTCACAAGGCTGGCAACCGATATTGCAGTATAGCTAGCACGAACATCTATTTCACCACCATCATGCATTCTGAAAGCTCCCGATGTATCTTTCATCCGAAGCATGAACTTGTACAGGTTGTCCCTGTTTACCGATGATAGTGCCCTTTCACTCCCTATAGTTACAAGTGTATTTACAGCAGCATAAGTTGTAGCGAGATGAGGCAACTAGCACAAAGAAGTGAAATTGACATCAAAAAATTCGCCTCATACTAAATTAACCTTATCGAGTGAGTTCGTAAAACTGAACTCAAATTAGGAAGATCAAAGAACAGTCAAGATTGACTATTCTAAAGTTTGCACGAGTTGGATAACACAAGTCAAAGCACTAACTTTGCCATCAAAATGAGAACCTGTAGTTATATAAACACTTTAGGCCATCAAATACCCAAAGATAAATTGATCTTCAGATATTTCATCACATCGAACTTGTTTGAGATGGTCAATTTAGTTAGGGTAGATGTTGAGTAGCCTAGACTGGCCCATCTAGTCATTTGAAGCAAAAGATCAGTGTTCACATGGTTTGTTGAAGTTTTGTATTGCCTAAGATAACGACAACTAATGTGAAATGTTAACCAACTCAAAGCTATATTACCCAGCCACAAGTTTGGAACCCAAAAGTTTGAGGTTAAGAGAAAACCTGTCCAGGTCCTCCGCCATAACCACCATCTTTGTCCTGACATCGAGATAAGAAGTCCACAATATCATCCTCAACATCGTCAGGTATTTCATCCAACAGAGCAAGTGCATGAATAATCCAGTAGCACAGCCAAGGTCGATTGGCATCGAGCACATGGAAGCTTGGTCCAAGATGTTTCAGCCCTCTCGTCAAATACTCAACATGCTGCTCACGCCACAGCTCTAACATGAGGGAATTGGCGTTGGGCGCGTTGCCGAAGAGGACGCGGTAGATTTCGCCCACCTTCGCCTCCACCTTCATCTGCTCCACCTGCGTCACAGTCAGCCGGGGCAGCTCAGCGGCCTGGCTATCCGCTGCCGGACCGCCCTCAGCAGCAGCAGGAGGATATGGCGGCGGCGGCGGCGGCGAGGGGGGGTCCATGGGCGCGGTGGTCGGCGGCGCGGAAGGCGGCGGCCTGCGAGCTCGCTGCAGCCGCGGGGATCTCACCGAAAGGCGGCGAACCATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0036200.1 | 1 | 30776408 | C | T |
| Osa01LNT0036200.1 | 1 | 30776975 | T | A |
| Osa01LNT0036200.1 | 1 | 30777007 | A | C |
| Osa01LNT0036200.1 | 1 | 30777505 | G | A |
| Osa01LNT0036200.1 | 1 | 30777650 | A | G |
| Osa01LNT0036200.1 | 1 | 30777824 | A | C |
| Osa01LNT0036200.1 | 1 | 30778265 | G | C |
| Osa01LNT0036200.1 | 1 | 30778834 | T | C |
| Osa01LNT0036200.1 | 1 | 30779140 | C | G |
| Osa01LNT0036200.1 | 1 | 30779152 | T | G |
| Osa01LNT0036200.1 | 1 | 30778277 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0036200.1 | osa-miR2873c | Cleavage | 5.0 | 12.922 | 1 | 21 |
| Osa01LNT0036200.1 | osa-miR171a | Translation | 5.0 | 14.819 | 1 | 21 |
| Osa01LNT0036200.1 | osa-miR166k-3p | Cleavage | 5.0 | 19.601 | 1 | 21 |
| Osa01LNT0036200.1 | osa-miR166l-3p | Cleavage | 5.0 | 19.601 | 1 | 21 |
| Osa01LNT0036200.1 | osa-miR1435 | Translation | 3.5 | 17.862 | 1 | 20 |
| Osa01LNT0036200.1 | osa-miR1862a | Cleavage | 5.0 | 19.695 | 1 | 24 |
| Osa01LNT0036200.1 | osa-miR1862b | Cleavage | 5.0 | 19.695 | 1 | 24 |
| Osa01LNT0036200.1 | osa-miR1862c | Cleavage | 5.0 | 19.695 | 1 | 24 |
| Osa01LNT0036200.1 | osa-miR2866 | Translation | 5.0 | 16.485 | 1 | 20 |
| Osa01LNT0036200.1 | osa-miR1862f | Cleavage | 3.5 | 19.695 | 1 | 20 |
| Osa01LNT0036200.1 | osa-miR1862g | Cleavage | 3.5 | 19.695 | 1 | 20 |
| Osa01LNT0036200.1 | osa-miR5159 | Translation | 5.0 | 13.678 | 1 | 24 |
| Osa01LNT0036200.1 | osa-miR5340 | Cleavage | 4.0 | 12.685 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0036200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0036200.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0036200.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0036200.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0036200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0036200.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0036200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)