© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0396800.1
GCGTTCATTAGCAAAAACTAAATTTGAAAGTATATTAGCTAGGATGTAACTACATCTAGCATGTGAAATACAGTTATCAGCTAAAACTGACTTGGAGTAAAATGTACCCCAAGAAATACAGTTTGGCGGAAGCTAAAAATTACAGTGCAAGTCATGCGATAAACTGTTATCACGGATGTGGAATGTTGTTCAGCGTGACAACATTTCGGAATCTTCGAGCAAACAAATGCATATGTTTGTTACAACCAGGTTAGTCGAAAGAAACATGAAACAGAGAACGAAGGCGCGTAAAATGCAGCTTCAGCCAGGCAATGCTTCACCTTCACTGCTCAGTCGAATGATATATTCAGATTTTCATACGGATGGATGCCTGCCTGGACGGCGGATCCCTTGGTGGCGGTCGCCGCGTTCTGTGCCGCCTGCGCCACCTGCTCACCAGTCTACATTCTCACGAGAAAAGATTAGAGAAGTTTAGAATAGTCACCTATTAGCTCCAAATTATATATAGTCAATCTAATAGCTTATCCATAAAATATAGTTACTTATAAGTGTATATTACACTATTATAATATATGATTACATCTTTCATACACACACAACACAACGGCGTTCTCTCGTGGCAAGGGATGGCACCAGTCATACCTATGCCATGCCCAAAGTAGGTAGAGTATTCGAGCATATGGCCATCTCAGCCTTGATTTCAGATGCTAATTATGTGATTAGTTAGTTGTATTTCATTTGGTACAAGCTTATTCGTTTAATTAACAGGAGATAAAGACCTATAGTGGGACTGCCTTGTGTCTGCACAAATGAATGAACAAATCTAGCTAACAACAAAATGTTAATCGGTAAAAATTGAATGTTAAAGAATATATGTGTAACTTCAATGAATGTCTACTTATTATGAATAAACACACCTAGAAAACAAAACAGAGAAACACTCGTGGAAATGTAGTTTAGTTGTAGAAGTTATACGACGAATTTATAAGGCTTCAGTTGTAAAAACTGCATGACAAATTTAGGATTATAATCATCCTTAATGGCATATATTCTAATAAGTGCTGACATATTATAGTTTGTGTATAATAAAATGTTGCTTCATTTTTAAAATACCATGCAGTTAGTTCTGGTGTGATGATCCACCATAGCTAAATTTTAGTGCTAGATCTGCCATTGACACAACATATTAAAGTCCATGCTACAAATCTGTAGTCCTCTCATCTTTTATTTTTTTTCCGCATGTGTTTATATTTGACTTATTTTTTTCCGCATATATTTATAAGTGACTTGCAGCCTACTATGATACTTGCTCTAATACACTTCCCTGATTGATGGTTACAACTAGCACTTGCATACGGCCCACGGCCCTAGGCTGTCACTGCCAAGAAATTCGAGTCACCAATGGGCCGTATTGCAGTGTAATATCTCCGTCTCAAATTATTTACTCCCTCCATCCACAAAAGTTACACCTATTTCACATTTGATTTTTTTCAAATAAGTTGTTCCTATTTGTAGTCTTTATGCATTCAAGACTTAAATGAAGAGATAAATTAAATGTTTTATTAGAACCCAAGGAGTCATCTAAATACTCATTGGTTGCATGCTTGTATTCACTCCTTGATTTTACAACATCCGAGGTGATTTAATTTCTCCTTGGTCTTGGTGTTAAAAGTAATATGTATAACTATTGTGGATGGAGGGAGTATTTTTTAAGGTTGTTTGGCATATCCTAAAGTTTAAAACAAATGACTATAATACCCTTATAAAATAATTTATGGTTAAGAACAAATTACTATAAACTTTATAAAATAATTTATGGTTGATGATAGAAAGGTGGTTGAGAGGTATAACAGTGAAAATTTTGAATGGAATGTGGATGGCGCCGGCGGCGTCCGTCACCGCCTCCACCGCACGTCGCGCCTGGTACTGCGCATCCACAAACCTCACACCACCACCATCACTAGCTCAACAACAATAAAAAAAAAGTGCAGTAATCAATCAAAACGATGATATATAATTCACCTCGCCCTCGGCGTGTGCCTTCCCGGACTCGAAGGATCGCTGGATGTTGCTCCACACGCCTGCTGCCGATAGATGATTTGTTGATTGATTACTTTCTTTCTGCTAGCAGTGTAAATCTAGACGAAAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0396800.1 | 8 | 1623396 | T | C |
| Osa08LNT0396800.1 | 8 | 1623616 | G | A |
| Osa08LNT0396800.1 | 8 | 1623123 | A | C |
| Osa08LNT0396800.1 | 8 | 1622092 | G | A |
| Osa08LNT0396800.1 | 8 | 1622293 | C | T |
| Osa08LNT0396800.1 | 8 | 1622443 | A | C |
| Osa08LNT0396800.1 | 8 | 1622449 | A | G |
| Osa08LNT0396800.1 | 8 | 1622452 | C | T |
| Osa08LNT0396800.1 | 8 | 1622456 | T | C |
| Osa08LNT0396800.1 | 8 | 1622505 | G | A |
| Osa08LNT0396800.1 | 8 | 1622524 | T | C |
| Osa08LNT0396800.1 | 8 | 1622535 | A | G |
| Osa08LNT0396800.1 | 8 | 1623220 | G | C |
| Osa08LNT0396800.1 | 8 | 1623407 | T | C |
| Osa08LNT0396800.1 | 8 | 1623434 | T | C |
| Osa08LNT0396800.1 | 8 | 1623644 | T | G |
| Osa08LNT0396800.1 | 8 | 1623688 | T | C |
| Osa08LNT0396800.1 | 8 | 1622455 | T | C |
| Osa08LNT0396800.1 | 8 | 1622534 | T | C |
| Osa08LNT0396800.1 | 8 | 1623178 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0396800.1 | osa-miR5526 | Cleavage | 4.5 | 6.082 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR5143b | Translation | 5.0 | 19.199 | 1 | 24 |
| Osa08LNT0396800.1 | osa-miR6248 | Cleavage | 5.0 | 6.32 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR6248 | Cleavage | 5.0 | 19.947 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166a-5p | Cleavage | 5.0 | 17.757 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166a-5p | Cleavage | 4.0 | 21.715 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166d-5p | Cleavage | 5.0 | 17.757 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166d-5p | Cleavage | 4.0 | 21.715 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166e-5p | Cleavage | 5.0 | 17.757 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166e-5p | Cleavage | 4.0 | 21.715 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR166l-5p | Cleavage | 5.0 | 17.757 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR1862e | Cleavage | 4.0 | 14.855 | 1 | 24 |
| Osa08LNT0396800.1 | osa-miR3981-3p | Translation | 5.0 | 11.764 | 1 | 21 |
| Osa08LNT0396800.1 | osa-miR5083 | Cleavage | 5.0 | 15.726 | 1 | 20 |
| Osa08LNT0396800.1 | osa-miR5143a | Translation | 5.0 | 19.199 | 1 | 24 |
| Osa08LNT0396800.1 | osa-miR2095-3p | Cleavage | 4.5 | 14.454 | 1 | 20 |
| Osa08LNT0396800.1 | osa-miR5147 | Cleavage | 4.0 | 5.821 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0396800.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0396800.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RM407 | RM38 |
| Osa08LNT0396800.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0396800.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)