>Osa08LNT0397300.1

GGCGGCGCGCCGGCACAGCAGCAGCCAGGCAACTGAGGCAAGGCAACAAGGCAAGTAGCGCCGGGCAGCAACAAGGCAGGCGGCAAGCCGGACGGCACCAACCACCAAGGCAGCAAGGCAAGCAGCAGCAAGCGTCAAGGGGCAAGGCAACAACTCAACAATTGAGGATTTGAACAAGTGAGCAGCTGGACAAGCAAAAGTAGTCCATGGGCCAGATAATTATGCTTGGCTTGAGGCCTTAAACGTACCGGTGAATATTAATATGCGCCCTGGCATGTATACTGGCCCAACTATACAGGAACATCTGCCATAATCAATAAAAATGGGCAGGACAGAGCGTCAAACTGTGTCCAAGTGCCATCTCACAAATACAGTTCTTATCATGTAGTGATGTAAATGTAACATGTTCATCTTTAACTTTTGATTTATGTTGTCCTTCATTGAAAAGGTGTGGCTATAATGGTGACATAGTCAAAACAGTTTGTACTAGCCACTTTGTATCTTAGTTACCAATCTGCAAATTCTGCATTCTAAATTGCTTCTGGAGATATTGTAAATGTATTTATGTTAATGCCTACATTTTTCTTTCTATTTCTATGCCTTCAGAGAGGCTGGTTGCCATGGTGTCAATATGGTCTGGAATTCAAATATTC

Explanation	CPC Score
noncoding (weak)	-0.0882534

Transcript ID	Chromosome	Locus	Ref	Alt
Osa08LNT0397300.1	8	1922801	G	C
Osa08LNT0397300.1	8	1923054	G	A
Osa08LNT0397300.1	8	1923081	T	C
Osa08LNT0397300.1	8	1923609	T	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa08LNT0397300.1	osa-miR5817	Translation	4.0	14.825	1	24
Osa08LNT0397300.1	osa-miR160e-5p	Translation	5.0	22.257	1	21
Osa08LNT0397300.1	osa-miR444a-3p.1	Translation	5.0	18.12	1	21
Osa08LNT0397300.1	osa-miR444d.1	Translation	5.0	18.12	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa08LNT0397300.1	8	nan	Resistance or Tolerance	Other soil stress tolerance	C390	C1121
Osa08LNT0397300.1	8	nan	Resistance or Tolerance	Drought tolerance	RM407	RM38
Osa08LNT0397300.1	8	qDTH8	Physiological trait	Flowering	R1943	R2976
Osa08LNT0397300.1	8	qPL8	Morphological trait	Panicle/flower	R1943	R2976

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus